| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is nasB [H]
Identifier: 169630603
GI number: 169630603
Start: 3567169
End: 3569682
Strand: Reverse
Name: nasB [H]
Synonym: MAB_3522c
Alternate gene names: 169630603
Gene position: 3569682-3567169 (Counterclockwise)
Preceding gene: 169630604
Following gene: 169630602
Centisome position: 70.45
GC content: 65.08
Gene sequence:
>2514_bases ATGAACAAGAAAGTCGTCGTCATCGGCCATGGAATGGTCGGTCACCGATTTGTCCAGGTGCTGCGTGAGCGCGATGCCAC CGATCAGTGGCAGGTGACGGTTCTGGGTGAGGAAGCCGATGCCGCCTATGACCGGGTGGCGTTGTCCTCGTACATCGACA GCTGGGACCGGGATACGCTGGCGCTCACCGGAAACGACTACGCGGAAGACCCGATGGTGACACTTCACCTCGGCGACCCG GTGGTGGGCATCGACCGGACCAATCAGACGGTCAGCACTGCGGCGGGCACCGTGCTGGACTATGACGCGCTTGTGATGGC CACCGGGTCTTACCCGTTCGTGCCGCCGGTGCCCGGTGGGGACGCTGAGGGCTGCTTTGTGTACCGCACCATGGATGACC TCGATGCCATCAAGGCCACCGCGGACAAGTCGCCCGGCTCAGCTGGTGTTGTGATCGGTGGCGGGCTACTGGGGCTGGAG GCCGCCAATGCGCTGCGGCTCATGGGATTGGCCCCGCACGTGGTGGAGCTCAATCCCCGCCTCATGCACCTGCAGGTCGA CGAGGGCGGCGGGGCCCTGCTGACCCGGCTGGTGACCGACCTGGGGTTGACCGTGCACACCAGCGTGTCCACACAGGCCA TCGAGAAGGCGGCCGATGGCACACTGTCGGTGCAGCTGTCGGACGGGTCGACGATCGATGCCTCGGTGCTAGTGTTCTCG GCCGGTATCCGGCCACGCGATGAGCTGGCCCGCGAGTGTGGACTGGAGCTGGCCGAGCGCGGCGGCATATTCACCGACCT GGGCTGTCAGACAAGTGATCTGCACATCTACGCGATCGGTGAGGTCGCCGCGATAGAAGGCCGCTGCTACGGTCTGGTCG CGCCCGGGTACACCACGGCGGAAATCGTCGCGGACCGGCTACTGGGCGGCAGTGCTCAGTTCCCCGGGGCCGACCTGTCC ACCAAACTCAAACTGCTGGGGGTCGACGTCGCCAGCTTTGGAGACGCGCACGCCACCGCCGATGGTGCGCTCGAGGTCGT TTTCAATGACGCCACCAAGGGCACCTACGCCAAGCTCGTGGTTTCCGACGATGCGCGAACTCTGTTGGGCGGCATCCTCG TCGGTGACGCTAGTGCCTACGGGACCCTGCGGCCCATGCTCGGCAGGGAGCTGCCCGCGGATCCGGCCTCGCTCATCGCC CCATCGGGTGCGGAGATCGGCGTGGGCGCGCTGCCCGACGATGCGCAGATCTGCTCGTGCAACGCCGTGACCAAGGGGGC GATATGCGCAGCCATCTGTGAGGGCGCCACCGATGTGCCCGCTCTGAAGTCGGCAACCTGTGCCGGAACCTCTTGCGGTA GCTGCATTCCCATGCTCAAGCAGATTCTTGCGGCCCAGGGCGTCGAGCAGTCCAAGGCGCTGTGTGAGCACTTCGAGCAG TCGCGCGCCGAGCTGTTCCAGGTGGTGCAGGCGACCGGAATCCGGACCTTCTCCGAGCTCATTGCCAAGCACGGCAAGGG CACTGGTTGCGATATCTGCAAGCCCACCGTGGCGTCCATCCTGGCCTCGACGTCCAGCGATCACATCCTGGAAGGCGAGC AGGCCGGGCTGCAGGACACCAACGATCACTTCCTGGCCAACATGCAGAAGAACGGCACCTACTCGGTAGTGCCGCGGCTG CCCGGCGGTGAGGTCACTCCGGAGAAGCTCATCGTCATCGGCGAGATCGCCCGGGATTTCGGTTTGTACACCAAGATCAC CGGTGGTCAGCGCATCGATCTGTTCGGTGCTCGCGTCGAGCAGCTCCCGCTGATCTGGAAGCGGCTCATCGATGCCGGCA TGGAATCGGGGCACGCCTACGGCAAGTCGTTGCGCACGGTGAAGAGCTGTGTCGGGTCCACCTGGTGCCGATACGGGGTT CAGGACTCGGTCGCAATGGCCGTTGAGCTTGAATTGCGTTATCGCGGACTGCGTTCGCCGCACAAGCTCAAGATGGGCGT ATCCGGGTGTGCTCGGGAATGTGCCGAGGCGCGTGGCAAGGACGTCGGCGTCATCGCCACCGAGAATGGCTGGAATCTCT ACGTGGGCGGTAATGGCGGCGCGACGCCGGCACATGCCAAATTGCTTGCCGGCGACCTGGACTCGGAGACGCTGATCAGG TACATCGATAGGTACCTGATGTTCTACATCCGCACCGCGGACAGGCTGCAGCGCACCGCGCCCTGGCAGGAGGCCATCGA GGGCGGCCTGGATCACATCCGGGCGGTCGTGTGCGAGGACTCGCTGGGCATCGCCGACGAGCTGGAAGCGGCGATGGCTC GTCACGTGCAGGGCTACCAGGACGAATGGGCAGCGGTCCTGGCCGACCCGGACAAGCTGCGACGGTTTGTTTCCTTCGTC AACGCGCCCGATCAGCCCGATTCGACCATCGCATTCGACGAAAGTGGCCCGCGCAAGGTGCCGGTGCTGCTGGGTACGCC CGGTTTCCGGGCCGCCGCCGAGGCCGCAACATAA
Upstream 100 bases:
>100_bases TCTGCGCGGCGGTCACCTGGTACGCGTACGTGCGGCGGCCCATGACCGTATCGGTTCCGGCGATCTCCAGCTCCAAAAAC GAAGTGGCGGTGTGAAACCC
Downstream 100 bases:
>100_bases CGCATCGGCCCCGGTAATACCGGGGTAACACAACGTCGGTACACATGACATATCGCGTGAAAACGCAGGAAACAACGAGA AGAAAGGCCGGAGATGACAA
Product: nitrite reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 837; Mature: 837
Protein sequence:
>837_residues MNKKVVVIGHGMVGHRFVQVLRERDATDQWQVTVLGEEADAAYDRVALSSYIDSWDRDTLALTGNDYAEDPMVTLHLGDP VVGIDRTNQTVSTAAGTVLDYDALVMATGSYPFVPPVPGGDAEGCFVYRTMDDLDAIKATADKSPGSAGVVIGGGLLGLE AANALRLMGLAPHVVELNPRLMHLQVDEGGGALLTRLVTDLGLTVHTSVSTQAIEKAADGTLSVQLSDGSTIDASVLVFS AGIRPRDELARECGLELAERGGIFTDLGCQTSDLHIYAIGEVAAIEGRCYGLVAPGYTTAEIVADRLLGGSAQFPGADLS TKLKLLGVDVASFGDAHATADGALEVVFNDATKGTYAKLVVSDDARTLLGGILVGDASAYGTLRPMLGRELPADPASLIA PSGAEIGVGALPDDAQICSCNAVTKGAICAAICEGATDVPALKSATCAGTSCGSCIPMLKQILAAQGVEQSKALCEHFEQ SRAELFQVVQATGIRTFSELIAKHGKGTGCDICKPTVASILASTSSDHILEGEQAGLQDTNDHFLANMQKNGTYSVVPRL PGGEVTPEKLIVIGEIARDFGLYTKITGGQRIDLFGARVEQLPLIWKRLIDAGMESGHAYGKSLRTVKSCVGSTWCRYGV QDSVAMAVELELRYRGLRSPHKLKMGVSGCARECAEARGKDVGVIATENGWNLYVGGNGGATPAHAKLLAGDLDSETLIR YIDRYLMFYIRTADRLQRTAPWQEAIEGGLDHIRAVVCEDSLGIADELEAAMARHVQGYQDEWAAVLADPDKLRRFVSFV NAPDQPDSTIAFDESGPRKVPVLLGTPGFRAAAEAAT
Sequences:
>Translated_837_residues MNKKVVVIGHGMVGHRFVQVLRERDATDQWQVTVLGEEADAAYDRVALSSYIDSWDRDTLALTGNDYAEDPMVTLHLGDP VVGIDRTNQTVSTAAGTVLDYDALVMATGSYPFVPPVPGGDAEGCFVYRTMDDLDAIKATADKSPGSAGVVIGGGLLGLE AANALRLMGLAPHVVELNPRLMHLQVDEGGGALLTRLVTDLGLTVHTSVSTQAIEKAADGTLSVQLSDGSTIDASVLVFS AGIRPRDELARECGLELAERGGIFTDLGCQTSDLHIYAIGEVAAIEGRCYGLVAPGYTTAEIVADRLLGGSAQFPGADLS TKLKLLGVDVASFGDAHATADGALEVVFNDATKGTYAKLVVSDDARTLLGGILVGDASAYGTLRPMLGRELPADPASLIA PSGAEIGVGALPDDAQICSCNAVTKGAICAAICEGATDVPALKSATCAGTSCGSCIPMLKQILAAQGVEQSKALCEHFEQ SRAELFQVVQATGIRTFSELIAKHGKGTGCDICKPTVASILASTSSDHILEGEQAGLQDTNDHFLANMQKNGTYSVVPRL PGGEVTPEKLIVIGEIARDFGLYTKITGGQRIDLFGARVEQLPLIWKRLIDAGMESGHAYGKSLRTVKSCVGSTWCRYGV QDSVAMAVELELRYRGLRSPHKLKMGVSGCARECAEARGKDVGVIATENGWNLYVGGNGGATPAHAKLLAGDLDSETLIR YIDRYLMFYIRTADRLQRTAPWQEAIEGGLDHIRAVVCEDSLGIADELEAAMARHVQGYQDEWAAVLADPDKLRRFVSFV NAPDQPDSTIAFDESGPRKVPVLLGTPGFRAAAEAAT >Mature_837_residues MNKKVVVIGHGMVGHRFVQVLRERDATDQWQVTVLGEEADAAYDRVALSSYIDSWDRDTLALTGNDYAEDPMVTLHLGDP VVGIDRTNQTVSTAAGTVLDYDALVMATGSYPFVPPVPGGDAEGCFVYRTMDDLDAIKATADKSPGSAGVVIGGGLLGLE AANALRLMGLAPHVVELNPRLMHLQVDEGGGALLTRLVTDLGLTVHTSVSTQAIEKAADGTLSVQLSDGSTIDASVLVFS AGIRPRDELARECGLELAERGGIFTDLGCQTSDLHIYAIGEVAAIEGRCYGLVAPGYTTAEIVADRLLGGSAQFPGADLS TKLKLLGVDVASFGDAHATADGALEVVFNDATKGTYAKLVVSDDARTLLGGILVGDASAYGTLRPMLGRELPADPASLIA PSGAEIGVGALPDDAQICSCNAVTKGAICAAICEGATDVPALKSATCAGTSCGSCIPMLKQILAAQGVEQSKALCEHFEQ SRAELFQVVQATGIRTFSELIAKHGKGTGCDICKPTVASILASTSSDHILEGEQAGLQDTNDHFLANMQKNGTYSVVPRL PGGEVTPEKLIVIGEIARDFGLYTKITGGQRIDLFGARVEQLPLIWKRLIDAGMESGHAYGKSLRTVKSCVGSTWCRYGV QDSVAMAVELELRYRGLRSPHKLKMGVSGCARECAEARGKDVGVIATENGWNLYVGGNGGATPAHAKLLAGDLDSETLIR YIDRYLMFYIRTADRLQRTAPWQEAIEGGLDHIRAVVCEDSLGIADELEAAMARHVQGYQDEWAAVLADPDKLRRFVSFV NAPDQPDSTIAFDESGPRKVPVLLGTPGFRAAAEAAT
Specific function: Nitrate assimilation (denitrification); second step. [C]
COG id: COG1251
COG function: function code C; NAD(P)H-nitrite reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitrite and sulfite reductase 4Fe-4S domain family [H]
Homologues:
Organism=Homo sapiens, GI226437568, Length=277, Percent_Identity=25.2707581227437, Blast_Score=75, Evalue=3e-13, Organism=Homo sapiens, GI65787454, Length=277, Percent_Identity=25.2707581227437, Blast_Score=75, Evalue=3e-13, Organism=Homo sapiens, GI21389617, Length=277, Percent_Identity=25.2707581227437, Blast_Score=75, Evalue=3e-13, Organism=Escherichia coli, GI1789765, Length=819, Percent_Identity=52.014652014652, Blast_Score=850, Evalue=0.0, Organism=Escherichia coli, GI1789065, Length=393, Percent_Identity=26.7175572519084, Blast_Score=105, Evalue=2e-23, Organism=Escherichia coli, GI1788892, Length=284, Percent_Identity=27.112676056338, Blast_Score=79, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17559934, Length=283, Percent_Identity=24.7349823321555, Blast_Score=83, Evalue=6e-16, Organism=Drosophila melanogaster, GI24585130, Length=282, Percent_Identity=22.6950354609929, Blast_Score=72, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007419 - InterPro: IPR013027 - InterPro: IPR005117 - InterPro: IPR012744 - InterPro: IPR012748 - InterPro: IPR017881 - InterPro: IPR006067 - InterPro: IPR006066 - InterPro: IPR001327 - InterPro: IPR017941 [H]
Pfam domain/function: PF04324 Fer2_BFD; PF01077 NIR_SIR; PF03460 NIR_SIR_ferr; PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: =1.7.1.4 [H]
Molecular weight: Translated: 88292; Mature: 88292
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS00022 EGF_1 ; PS00365 NIR_SIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKVVVIGHGMVGHRFVQVLRERDATDQWQVTVLGEEADAAYDRVALSSYIDSWDRDTL CCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEE ALTGNDYAEDPMVTLHLGDPVVGIDRTNQTVSTAAGTVLDYDALVMATGSYPFVPPVPGG EECCCCCCCCCEEEEECCCCEEECCCCCCCHHHHCCCEEECCEEEEECCCCCCCCCCCCC DAEGCFVYRTMDDLDAIKATADKSPGSAGVVIGGGLLGLEAANALRLMGLAPHVVELNPR CCCCEEEEEEHHHHHHHHHHCCCCCCCCEEEEECCEEHHHHHHHHHHHCCCCCEEECCCE LMHLQVDEGGGALLTRLVTDLGLTVHTSVSTQAIEKAADGTLSVQLSDGSTIDASVLVFS EEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHCCCEEEEEECCCCCCEEEEEEEE AGIRPRDELARECGLELAERGGIFTDLGCQTSDLHIYAIGEVAAIEGRCYGLVAPGYTTA CCCCCHHHHHHHHCHHHHHCCCEEEECCCCCCCEEEEEECCEEEECCCEEEEECCCCCHH EIVADRLLGGSAQFPGADLSTKLKLLGVDVASFGDAHATADGALEVVFNDATKGTYAKLV HHHHHHHCCCCCCCCCCCCCCEEEEEEEEHHHCCCCCCCCCCEEEEEEECCCCCEEEEEE VSDDARTLLGGILVGDASAYGTLRPMLGRELPADPASLIAPSGAEIGVGALPDDAQICSC ECCCHHHHHCEEEEECCCCCCCHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEC NAVTKGAICAAICEGATDVPALKSATCAGTSCGSCIPMLKQILAAQGVEQSKALCEHFEQ CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH SRAELFQVVQATGIRTFSELIAKHGKGTGCDICKPTVASILASTSSDHILEGEQAGLQDT HHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCCCC NDHFLANMQKNGTYSVVPRLPGGEVTPEKLIVIGEIARDFGLYTKITGGQRIDLFGARVE CCHHEEEECCCCCEEEEECCCCCCCCHHHEEEEEHHHHHCCCEEEECCCCEEEEECCCHH QLPLIWKRLIDAGMESGHAYGKSLRTVKSCVGSTWCRYGVQDSVAMAVELELRYRGLRSP HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHCCCCCC HKLKMGVSGCARECAEARGKDVGVIATENGWNLYVGGNGGATPAHAKLLAGDLDSETLIR HHEECCHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCHHHHHEECCCCHHHHHH YIDRYLMFYIRTADRLQRTAPWQEAIEGGLDHIRAVVCEDSLGIADELEAAMARHVQGYQ HHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHEEECCCCCCHHHHHHHHHHHHCCCC DEWAAVLADPDKLRRFVSFVNAPDQPDSTIAFDESGPRKVPVLLGTPGFRAAAEAAT CCHHEEECCHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEECCCCCCHHCCCC >Mature Secondary Structure MNKKVVVIGHGMVGHRFVQVLRERDATDQWQVTVLGEEADAAYDRVALSSYIDSWDRDTL CCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEE ALTGNDYAEDPMVTLHLGDPVVGIDRTNQTVSTAAGTVLDYDALVMATGSYPFVPPVPGG EECCCCCCCCCEEEEECCCCEEECCCCCCCHHHHCCCEEECCEEEEECCCCCCCCCCCCC DAEGCFVYRTMDDLDAIKATADKSPGSAGVVIGGGLLGLEAANALRLMGLAPHVVELNPR CCCCEEEEEEHHHHHHHHHHCCCCCCCCEEEEECCEEHHHHHHHHHHHCCCCCEEECCCE LMHLQVDEGGGALLTRLVTDLGLTVHTSVSTQAIEKAADGTLSVQLSDGSTIDASVLVFS EEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHCCCEEEEEECCCCCCEEEEEEEE AGIRPRDELARECGLELAERGGIFTDLGCQTSDLHIYAIGEVAAIEGRCYGLVAPGYTTA CCCCCHHHHHHHHCHHHHHCCCEEEECCCCCCCEEEEEECCEEEECCCEEEEECCCCCHH EIVADRLLGGSAQFPGADLSTKLKLLGVDVASFGDAHATADGALEVVFNDATKGTYAKLV HHHHHHHCCCCCCCCCCCCCCEEEEEEEEHHHCCCCCCCCCCEEEEEEECCCCCEEEEEE VSDDARTLLGGILVGDASAYGTLRPMLGRELPADPASLIAPSGAEIGVGALPDDAQICSC ECCCHHHHHCEEEEECCCCCCCHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEC NAVTKGAICAAICEGATDVPALKSATCAGTSCGSCIPMLKQILAAQGVEQSKALCEHFEQ CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH SRAELFQVVQATGIRTFSELIAKHGKGTGCDICKPTVASILASTSSDHILEGEQAGLQDT HHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCCCC NDHFLANMQKNGTYSVVPRLPGGEVTPEKLIVIGEIARDFGLYTKITGGQRIDLFGARVE CCHHEEEECCCCCEEEEECCCCCCCCHHHEEEEEHHHHHCCCEEEECCCCEEEEECCCHH QLPLIWKRLIDAGMESGHAYGKSLRTVKSCVGSTWCRYGVQDSVAMAVELELRYRGLRSP HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHCCCCCC HKLKMGVSGCARECAEARGKDVGVIATENGWNLYVGGNGGATPAHAKLLAGDLDSETLIR HHEECCHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCHHHHHEECCCCHHHHHH YIDRYLMFYIRTADRLQRTAPWQEAIEGGLDHIRAVVCEDSLGIADELEAAMARHVQGYQ HHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHEEECCCCCCHHHHHHHHHHHHCCCC DEWAAVLADPDKLRRFVSFVNAPDQPDSTIAFDESGPRKVPVLLGTPGFRAAAEAAT CCHHEEECCHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEECCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8468296 [H]