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The map label for this gene is nudC [H]

Identifier: 169630594

GI number: 169630594

Start: 3555164

End: 3556096

Strand: Reverse

Name: nudC [H]

Synonym: MAB_3513c

Alternate gene names: 169630594

Gene position: 3556096-3555164 (Counterclockwise)

Preceding gene: 169630595

Following gene: 169630592

Centisome position: 70.18

GC content: 66.45

Gene sequence:

>933_bases
ATGACCTTCCGCCTTCGCAACATTCCCTTGCTGTCGCGCGTCGGGCTGGACCGTGCCGATGAACTGCGTTCAAACCCTGA
GGAATTGGCCAAGGGCTGGGCCGAGGCGGGCCTGATCACCCTGGATGTGCGTGGCCGGGTGAACATCGTCGACGGGCAGG
TGGTGATCGAAGACGCCGCCCGCATCGGCGATCAGCCGCCCGAGCACGCCGTGTTCCTCGGACGGATCCCGGGCGGCCGT
CACGTATGGGCGGTGCGCGCCGACCTCGACGAGGACAGCGCGCCGCTGCTGGACCTGCGCCGCTCCGGTCAGTTGTTCGA
CGACACCAGCGCAGCGCTGCTGGCCACCGCCATGGCCATGCTGGCCTGGCATGACAACGCCGGTTATAGCCCCGTCGACG
GATCGCCGACCATTCCGGCCAAGGGTGGTTGGGTTCGGGTCAACTCGGCCACGGGGCAAGAAGAATTTCCCCGCACTGAT
CCGGCCATCATCTGTCTGGTGCATGACGGCGGCGATCGCGCGGTGCTCGGCCGTCAGAAGTTCTGGCCGGAGCGGATGTT
CTCGCTGCTTGCCGGATTCGTCGAGGCGGGCGAATCACTGGAAGCATGCGTGGCCCGCGAGGTGGCTGAGGAAGTCGGCC
TCACTGTCACCGATGTGCAGTATCTGGGTAGCCAGCCGTGGCCTTTCCCGCGGTCGATCATGCTGGGCTTCCATGCGATC
GGCGATCCCTCGCAGCCCTTCGCGTTCAATGACGGCGAAATTGCCGAGGCAGACTGGTTCACCCGTGCGGAGGTGCGCTC
CGCCCTGGAAGCGGGGGATTGGACCACTGCGTCCGACTCACGGCTGATGTTGCCGGGGTCGATCTCCATCGCCCGGGAGA
TCGTGGAGTCCTGGGCGTATGCCGGCGAGGAGCCGCCTGCGGGAAGACCGTAG

Upstream 100 bases:

>100_bases
GTGGTGCGCGACGGCATCCTGCACCGGGTCGACGCCCCCGAGGTAGATTCCATCGAGGCAACCGACCGCCTGCTCTACGT
CCGCAACGCCGGAGCCTGAT

Downstream 100 bases:

>100_bases
CCAACGATTAGAGGCCGAGCTTGGCCTTCACCTGGGCCAGCGACGGATTGGTCAGCGCGCTGCCATCCGGGAACTTGACG
GTCGGCACCGTCTGGTTGCC

Product: NADH pyrophosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MTFRLRNIPLLSRVGLDRADELRSNPEELAKGWAEAGLITLDVRGRVNIVDGQVVIEDAARIGDQPPEHAVFLGRIPGGR
HVWAVRADLDEDSAPLLDLRRSGQLFDDTSAALLATAMAMLAWHDNAGYSPVDGSPTIPAKGGWVRVNSATGQEEFPRTD
PAIICLVHDGGDRAVLGRQKFWPERMFSLLAGFVEAGESLEACVAREVAEEVGLTVTDVQYLGSQPWPFPRSIMLGFHAI
GDPSQPFAFNDGEIAEADWFTRAEVRSALEAGDWTTASDSRLMLPGSISIAREIVESWAYAGEEPPAGRP

Sequences:

>Translated_310_residues
MTFRLRNIPLLSRVGLDRADELRSNPEELAKGWAEAGLITLDVRGRVNIVDGQVVIEDAARIGDQPPEHAVFLGRIPGGR
HVWAVRADLDEDSAPLLDLRRSGQLFDDTSAALLATAMAMLAWHDNAGYSPVDGSPTIPAKGGWVRVNSATGQEEFPRTD
PAIICLVHDGGDRAVLGRQKFWPERMFSLLAGFVEAGESLEACVAREVAEEVGLTVTDVQYLGSQPWPFPRSIMLGFHAI
GDPSQPFAFNDGEIAEADWFTRAEVRSALEAGDWTTASDSRLMLPGSISIAREIVESWAYAGEEPPAGRP
>Mature_309_residues
TFRLRNIPLLSRVGLDRADELRSNPEELAKGWAEAGLITLDVRGRVNIVDGQVVIEDAARIGDQPPEHAVFLGRIPGGRH
VWAVRADLDEDSAPLLDLRRSGQLFDDTSAALLATAMAMLAWHDNAGYSPVDGSPTIPAKGGWVRVNSATGQEEFPRTDP
AIICLVHDGGDRAVLGRQKFWPERMFSLLAGFVEAGESLEACVAREVAEEVGLTVTDVQYLGSQPWPFPRSIMLGFHAIG
DPSQPFAFNDGEIAEADWFTRAEVRSALEAGDWTTASDSRLMLPGSISIAREIVESWAYAGEEPPAGRP

Specific function: Unknown

COG id: COG2816

COG function: function code L; NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI50593112, Length=254, Percent_Identity=35.4330708661417, Blast_Score=135, Evalue=5e-32,
Organism=Homo sapiens, GI13899267, Length=202, Percent_Identity=35.6435643564356, Blast_Score=133, Evalue=2e-31,
Organism=Escherichia coli, GI48994995, Length=137, Percent_Identity=37.2262773722628, Blast_Score=92, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI212645999, Length=160, Percent_Identity=32.5, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71986510, Length=161, Percent_Identity=32.2981366459627, Blast_Score=79, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6321371, Length=217, Percent_Identity=29.9539170506912, Blast_Score=96, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015375
- InterPro:   IPR022925
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376 [H]

Pfam domain/function: PF00293 NUDIX; PF09296 NUDIX-like; PF09297 zf-NADH-PPase [H]

EC number: =3.6.1.22 [H]

Molecular weight: Translated: 33683; Mature: 33552

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFRLRNIPLLSRVGLDRADELRSNPEELAKGWAEAGLITLDVRGRVNIVDGQVVIEDAA
CCEEECCCCHHHHHCCCCHHHHHCCHHHHHHHHHHCCEEEEEECCEEEEECCEEEEEHHH
RIGDQPPEHAVFLGRIPGGRHVWAVRADLDEDSAPLLDLRRSGQLFDDTSAALLATAMAM
HCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHH
LAWHDNAGYSPVDGSPTIPAKGGWVRVNSATGQEEFPRTDPAIICLVHDGGDRAVLGRQK
HHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEECCHH
FWPERMFSLLAGFVEAGESLEACVAREVAEEVGLTVTDVQYLGSQPWPFPRSIMLGFHAI
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEHHHHCCCCCCCCHHHHHHHHHC
GDPSQPFAFNDGEIAEADWFTRAEVRSALEAGDWTTASDSRLMLPGSISIAREIVESWAY
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHH
AGEEPPAGRP
CCCCCCCCCC
>Mature Secondary Structure 
TFRLRNIPLLSRVGLDRADELRSNPEELAKGWAEAGLITLDVRGRVNIVDGQVVIEDAA
CEEECCCCHHHHHCCCCHHHHHCCHHHHHHHHHHCCEEEEEECCEEEEECCEEEEEHHH
RIGDQPPEHAVFLGRIPGGRHVWAVRADLDEDSAPLLDLRRSGQLFDDTSAALLATAMAM
HCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHH
LAWHDNAGYSPVDGSPTIPAKGGWVRVNSATGQEEFPRTDPAIICLVHDGGDRAVLGRQK
HHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEECCHH
FWPERMFSLLAGFVEAGESLEACVAREVAEEVGLTVTDVQYLGSQPWPFPRSIMLGFHAI
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEHHHHCCCCCCCCHHHHHHHHHC
GDPSQPFAFNDGEIAEADWFTRAEVRSALEAGDWTTASDSRLMLPGSISIAREIVESWAY
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHH
AGEEPPAGRP
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]