| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630575
Identifier: 169630575
GI number: 169630575
Start: 3535809
End: 3536138
Strand: Reverse
Name: 169630575
Synonym: MAB_3494c
Alternate gene names: NA
Gene position: 3536138-3535809 (Counterclockwise)
Preceding gene: 169630579
Following gene: 169630573
Centisome position: 69.79
GC content: 64.85
Gene sequence:
>330_bases ATGCAGAAACGCTCGATCGACGCAGTGATACGTCAGCTGTTCGAGCGTGCCGACAACGGCCACAACGCCGCGGACACGGT TGTCGGCGGGCATGAACGGATACTGCGCCAGACGGTGATTGCCCTGCGTGAAGGCGCCGAACTGGGTGAGCACGAGAGCC CGGGCGAGGCCACCATCTACGTCATCCGAGGTTCGGTGCGTCTGGTGGCAGGCGCCGAACATTGGGACGGTCGTGCGGGT GATCTGATCGAGATTCCCGATGCCCGACACTCGCTGCAGGCTCTGACCGACTCGGCGGTCCTGCTCACCGTGGCCAAGCG CCGTGGCTAG
Upstream 100 bases:
>100_bases GCCAGGGTATGGCAGTGCGCGGCAGGGTGCCGATCGGACAGCCCGGACTGCGTTGTTCGGGAGGGTTGACGGGCCTGCCG CCGGGGCATGAAATGGAGTG
Downstream 100 bases:
>100_bases CACTGACGGCTAGCGCCGCGATCTAGCCGTGGCAGGTGGCCGTCGAGGCGTGGCCGGTGGTGGTGTCCTCGACCTTGACC TTGCCGTTGACGATCAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin Domain-Containing Protein; MarR Family Transcriptional Regulator; Cupin 2 Conserved Barrel Domain Protein
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MQKRSIDAVIRQLFERADNGHNAADTVVGGHERILRQTVIALREGAELGEHESPGEATIYVIRGSVRLVAGAEHWDGRAG DLIEIPDARHSLQALTDSAVLLTVAKRRG
Sequences:
>Translated_109_residues MQKRSIDAVIRQLFERADNGHNAADTVVGGHERILRQTVIALREGAELGEHESPGEATIYVIRGSVRLVAGAEHWDGRAG DLIEIPDARHSLQALTDSAVLLTVAKRRG >Mature_109_residues MQKRSIDAVIRQLFERADNGHNAADTVVGGHERILRQTVIALREGAELGEHESPGEATIYVIRGSVRLVAGAEHWDGRAG DLIEIPDARHSLQALTDSAVLLTVAKRRG
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11858; Mature: 11858
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKRSIDAVIRQLFERADNGHNAADTVVGGHERILRQTVIALREGAELGEHESPGEATIY CCCCHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE VIRGSVRLVAGAEHWDGRAGDLIEIPDARHSLQALTDSAVLLTVAKRRG EEECCEEEEECCCCCCCCCCCEEECCCCHHHHHHHCCCHHEEEEECCCC >Mature Secondary Structure MQKRSIDAVIRQLFERADNGHNAADTVVGGHERILRQTVIALREGAELGEHESPGEATIY CCCCHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE VIRGSVRLVAGAEHWDGRAGDLIEIPDARHSLQALTDSAVLLTVAKRRG EEECCEEEEECCCCCCCCCCCEEECCCCHHHHHHHCCCHHEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA