| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169630532
Identifier: 169630532
GI number: 169630532
Start: 3494918
End: 3495241
Strand: Reverse
Name: 169630532
Synonym: MAB_3451c
Alternate gene names: NA
Gene position: 3495241-3494918 (Counterclockwise)
Preceding gene: 169630533
Following gene: 169630531
Centisome position: 68.98
GC content: 64.51
Gene sequence:
>324_bases ATGATCATCGTGACGAGCAACGACATCCCCGGCTACAAGATCGCCGCGGTATTCGGCGAGGTCTTCGGACTCACCGTGCG GTCGCGGCACATCGGCTCCAATCTTGCGGCCTCCTTCAAGTCCATCGCCGGTGGCGAGCTCAAGGGCATTACCCAGTTGC TGCACGAGAGCCGTCGTGAGGCACTCGCCCGGCTGGCCGCCGAGGCCGAAGCCCGTGGCGCCAATGCCGTGGTCGCGTTC CGTTTCGAGACCACCGAGTACGCCAATACCGGCGTCGAGGTGTGTGCGTACGGCACCGCCGTCGGCATTCAGCCGATCCA ATAG
Upstream 100 bases:
>100_bases CCCGTCTCGGTTGGAGGCTGATCCCGACGCGGACCGCCGCCCGCTATGGCAGGACGTCACCTCCATCGTCTAGCCCACAC GCGGCGGTACGTTGGGCTTC
Downstream 100 bases:
>100_bases CGACCGTTCGGTAAGACACGGTTCACCTGATGCGGGCAGAATCAGGTGCGTGAGCAACGCGCGCGCCGGACAGCCGGCCC AGCCGGAAGACCTCATCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MIIVTSNDIPGYKIAAVFGEVFGLTVRSRHIGSNLAASFKSIAGGELKGITQLLHESRREALARLAAEAEARGANAVVAF RFETTEYANTGVEVCAYGTAVGIQPIQ
Sequences:
>Translated_107_residues MIIVTSNDIPGYKIAAVFGEVFGLTVRSRHIGSNLAASFKSIAGGELKGITQLLHESRREALARLAAEAEARGANAVVAF RFETTEYANTGVEVCAYGTAVGIQPIQ >Mature_107_residues MIIVTSNDIPGYKIAAVFGEVFGLTVRSRHIGSNLAASFKSIAGGELKGITQLLHESRREALARLAAEAEARGANAVVAF RFETTEYANTGVEVCAYGTAVGIQPIQ
Specific function: Unknown
COG id: COG0393
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0145 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3451_MYCA9 (B1MES1)
Other databases:
- EMBL: CU458896 - RefSeq: YP_001704181.1 - ProteinModelPortal: B1MES1 - SMR: B1MES1 - EnsemblBacteria: EBMYCT00000004963 - GeneID: 5965951 - GenomeReviews: CU458896_GR - KEGG: mab:MAB_3451c - GeneTree: EBGT00050000017733 - HOGENOM: HBG339160 - OMA: YGTAVRL - BioCyc: MABS561007:MAB_3451C-MONOMER - HAMAP: MF_00338 - InterPro: IPR002765 - Gene3D: G3DSA:3.30.110.70
Pfam domain/function: PF01906 DUF74
EC number: NA
Molecular weight: Translated: 11311; Mature: 11311
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIVTSNDIPGYKIAAVFGEVFGLTVRSRHIGSNLAASFKSIAGGELKGITQLLHESRRE CEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH ALARLAAEAEARGANAVVAFRFETTEYANTGVEVCAYGTAVGIQPIQ HHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCC >Mature Secondary Structure MIIVTSNDIPGYKIAAVFGEVFGLTVRSRHIGSNLAASFKSIAGGELKGITQLLHESRRE CEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH ALARLAAEAEARGANAVVAFRFETTEYANTGVEVCAYGTAVGIQPIQ HHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA