| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is yeiH [C]
Identifier: 169630514
GI number: 169630514
Start: 3478654
End: 3479784
Strand: Reverse
Name: yeiH [C]
Synonym: MAB_3433c
Alternate gene names: 169630514
Gene position: 3479784-3478654 (Counterclockwise)
Preceding gene: 169630515
Following gene: 169630513
Centisome position: 68.67
GC content: 63.04
Gene sequence:
>1131_bases ATGACGTCAAAGGCCGAGGCGCACACCGCCGATGAGGCATTCGAAAACCCCGAAGAGAGCTTCACCTCACCGCGGCCGCT GGACTATGTACCCGGCATCCTGCTGCTCATCGGCGTGGGACTGCTGGGCAAGTACGCGCAGATCTGGTGGAAAGACCTGG CCAAGGCGCAGCACTGGACGGTGCCCGATATCGAATATGTGTTGTGGGCCATCGTGATCGGACTGTTGATCACCAACACC GTCGGGCTGCACCGGATCTTCCGGCCCGGAGTGCAGACCTACGAGTTCTGGCTGAAGATCGGAATCGTCGCGCTGGGTGC GCGATTCGTACTCGGAGACGTTCTCAAACTGGGTGGCACCAGCCTGGTGCAGATCCTGGTGGACATGACCGTGGCGGGCG CCATCATCCTCTTGGCCGCCAAATGGTTTGGCCTCAGCGGAAAGCTGGGTTCGCTGCTGGCCATCGGAACCTCCATCTGC GGGGTCTCGGCAATCATCGCGGCCAAGGGGGCGATCCGGGCGCGCAATTCTGACGTCAGCTACGCCATCGCATCCATTCT GGCGCTCGGTGCGGTGGCGTTGTTCACCCTGCCGGCTATCGGGCATGGCCTTGGCCTGAGTGATTACGAGTTCGGGCTGT GGGCCGGTCTAGCCGTCGACAACACCGCCGAAACCGTCGCCACCGGCCGTCTGTACTCCGAGCATGCGGGTGACATCGCG ACGGTCGTCAAATCCACGCGCAACGCGCTCATTGGGTTCGTGGTGCTCGGGTTCGCGCTGTACTGGGCTGCTCGCGGTGA GGCGGAGACTCTCGCTCCCGGGATCAAGGCCAAGGCTGCGTTCGTGTGGGACAAGTTTCCCAAGTTCGTGCTCGGCTTCC TGGCGGTCTCAACCATCGTTACCCTCGGGTGGCTGACAAAGGGTCAGGTCAACAACCTGGTCAACGTGTCCAAGTGGGCC TTCCTGCTGACCTTCGCCGGAGTCGGACTGAATACCAACTTCCGGGAGATCGCCCGCAGCGGTTGGCCCCCCCTGGTGGT GGCGGTGATCGGTCTGGTGGTGGTGGCAGCGGTGTCCTTGGGTCTGGTGCTGCTGACCTCGCGGGTATTCGGCTGGGGAG CGCACGTCTAG
Upstream 100 bases:
>100_bases ATCGCGCGCATCAGTATCGATTGGTGGGCGACCATCATCGCCGGAGTGATCGCCCTACTGGCGGTTGCGAACGTCCTGCC GAAGATTCCGTGGTGATCCG
Downstream 100 bases:
>100_bases GCGGCTCGACCCCGCGTACGTACCGTCGTCACTTACACGTAACCGGCGCGGACCGCGTACGCAACATCACGCCGAGATCC TGTGCGGCGATGACGATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MTSKAEAHTADEAFENPEESFTSPRPLDYVPGILLLIGVGLLGKYAQIWWKDLAKAQHWTVPDIEYVLWAIVIGLLITNT VGLHRIFRPGVQTYEFWLKIGIVALGARFVLGDVLKLGGTSLVQILVDMTVAGAIILLAAKWFGLSGKLGSLLAIGTSIC GVSAIIAAKGAIRARNSDVSYAIASILALGAVALFTLPAIGHGLGLSDYEFGLWAGLAVDNTAETVATGRLYSEHAGDIA TVVKSTRNALIGFVVLGFALYWAARGEAETLAPGIKAKAAFVWDKFPKFVLGFLAVSTIVTLGWLTKGQVNNLVNVSKWA FLLTFAGVGLNTNFREIARSGWPPLVVAVIGLVVVAAVSLGLVLLTSRVFGWGAHV
Sequences:
>Translated_376_residues MTSKAEAHTADEAFENPEESFTSPRPLDYVPGILLLIGVGLLGKYAQIWWKDLAKAQHWTVPDIEYVLWAIVIGLLITNT VGLHRIFRPGVQTYEFWLKIGIVALGARFVLGDVLKLGGTSLVQILVDMTVAGAIILLAAKWFGLSGKLGSLLAIGTSIC GVSAIIAAKGAIRARNSDVSYAIASILALGAVALFTLPAIGHGLGLSDYEFGLWAGLAVDNTAETVATGRLYSEHAGDIA TVVKSTRNALIGFVVLGFALYWAARGEAETLAPGIKAKAAFVWDKFPKFVLGFLAVSTIVTLGWLTKGQVNNLVNVSKWA FLLTFAGVGLNTNFREIARSGWPPLVVAVIGLVVVAAVSLGLVLLTSRVFGWGAHV >Mature_375_residues TSKAEAHTADEAFENPEESFTSPRPLDYVPGILLLIGVGLLGKYAQIWWKDLAKAQHWTVPDIEYVLWAIVIGLLITNTV GLHRIFRPGVQTYEFWLKIGIVALGARFVLGDVLKLGGTSLVQILVDMTVAGAIILLAAKWFGLSGKLGSLLAIGTSICG VSAIIAAKGAIRARNSDVSYAIASILALGAVALFTLPAIGHGLGLSDYEFGLWAGLAVDNTAETVATGRLYSEHAGDIAT VVKSTRNALIGFVVLGFALYWAARGEAETLAPGIKAKAAFVWDKFPKFVLGFLAVSTIVTLGWLTKGQVNNLVNVSKWAF LLTFAGVGLNTNFREIARSGWPPLVVAVIGLVVVAAVSLGLVLLTSRVFGWGAHV
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=291, Percent_Identity=28.1786941580756, Blast_Score=86, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 39895; Mature: 39764
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSKAEAHTADEAFENPEESFTSPRPLDYVPGILLLIGVGLLGKYAQIWWKDLAKAQHWT CCCCCCCCCHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VPDIEYVLWAIVIGLLITNTVGLHRIFRPGVQTYEFWLKIGIVALGARFVLGDVLKLGGT CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH SLVQILVDMTVAGAIILLAAKWFGLSGKLGSLLAIGTSICGVSAIIAAKGAIRARNSDVS HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH YAIASILALGAVALFTLPAIGHGLGLSDYEFGLWAGLAVDNTAETVATGRLYSEHAGDIA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEECCEECCCHHHHHHCCHHHHHHHHHH TVVKSTRNALIGFVVLGFALYWAARGEAETLAPGIKAKAAFVWDKFPKFVLGFLAVSTIV HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TLGWLTKGQVNNLVNVSKWAFLLTFAGVGLNTNFREIARSGWPPLVVAVIGLVVVAAVSL HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHH GLVLLTSRVFGWGAHV HHHHHHHHHHHCCCCC >Mature Secondary Structure TSKAEAHTADEAFENPEESFTSPRPLDYVPGILLLIGVGLLGKYAQIWWKDLAKAQHWT CCCCCCCCHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VPDIEYVLWAIVIGLLITNTVGLHRIFRPGVQTYEFWLKIGIVALGARFVLGDVLKLGGT CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH SLVQILVDMTVAGAIILLAAKWFGLSGKLGSLLAIGTSICGVSAIIAAKGAIRARNSDVS HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH YAIASILALGAVALFTLPAIGHGLGLSDYEFGLWAGLAVDNTAETVATGRLYSEHAGDIA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEECCEECCCHHHHHHCCHHHHHHHHHH TVVKSTRNALIGFVVLGFALYWAARGEAETLAPGIKAKAAFVWDKFPKFVLGFLAVSTIV HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TLGWLTKGQVNNLVNVSKWAFLLTFAGVGLNTNFREIARSGWPPLVVAVIGLVVVAAVSL HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHH GLVLLTSRVFGWGAHV HHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11549181 [H]