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The map label for this gene is yfiY [H]

Identifier: 169630471

GI number: 169630471

Start: 3440757

End: 3441797

Strand: Direct

Name: yfiY [H]

Synonym: MAB_3390

Alternate gene names: 169630471

Gene position: 3440757-3441797 (Clockwise)

Preceding gene: 169630468

Following gene: 169630472

Centisome position: 67.9

GC content: 65.32

Gene sequence:

>1041_bases
GTGCAGACGGCGAGGTTGTGGGGCGCTGCCGCGATATCGGCGGCACTGGTGACGGCGACGGTGTCGGGCTGTACCGAGAA
ACCCACCAATGAGACCCCGAGCACTCTGGCGACCAGCACAACGAAGATCGCCAGTGCCGGCGTGTTGGGCAACGCACGCA
AGCCCGACGAGTCCTGTGCGAAGGATGCCGCGGCCGTCGATCCGTCCGCGCCCCGCGAGGTACGACATGCCCAAGGCGAG
ACCGAAGTGCCCGAAGACGCCAAACGCATCGTGGTTCTCGATGCCGGCGCGATCGACACGCTCTGCGCACTGGGACTGCA
GGACCGGATCGTTGGAGTGGCGCTGGCGGACCAAGCGGCCGCTCCCCCGTCGTACCTGGGCACCACGGTCCACAACCTGC
CGTCGATCGGACCGATGGCGTCGCCGGATCTGGCCAAGATCGGTGCCGCCAAGCCCGATTTGATTCTGAGTTCGGCCGGT
GAGCAGAACTCCTACCTCGACCTGAGCGCCATCGCACCCACCGTGATCGTCTCCGGGCACGATCTGGCCGAGCACGTTCG
CTTGGTGGGCAAGGCCACCAGGCGAACGGCCGACACCGACAAGTTGTGGACCGGGTTCGTCGACGCGGCCAAAAAGGTAG
GCCGCGAGAACGACGCCGCGCACTTCCAGGCCTCCATCGTGCAGTTCACCGACCAGACCGTGCGGGTATACGGCGCGAAC
AACTTCCCGGCCTCGGTGCTCGCCACCGTGGGGCTAGATCGCCCTGCCACGCAACGATTTACCGATACACCGTTCATCGA
GATCGGCACGGAGGACTTCTCGGCGGCAGAAGGCGACATCATCTACGTCTCGTTCACCAGTTCATCGGCCAAGGATCGCG
CGGCCCGGATTTTTGGCAGCAAGCCCTGGATGGCGCTGGGCGCCACGCGCGATAACCGGGTGTTCGCGGTCAACAACGAG
GTCTGGCAGACCGGGGATGGAATCGTCGCGGGCCGCGGAATTCTCGACGACTTGCAGTGGGTCAACGCGCCGATCAACTA
G

Upstream 100 bases:

>100_bases
GTCCTACACAGAGTCGTATTTGAGTGACGCAACCGCGCTCACCGGGCTCTTTCGCGGTCCTACCCGCGTGTTCGAGGGCT
CGCCCGGTAAGTTCGACCGC

Downstream 100 bases:

>100_bases
CTGCCGAGATCGCACCGCTCCAGCCCAGGGCCCCAGGCGCTACGCTCCCGGCATGTACCACGTACTGCAGCTGACCTATA
CCCAACCGATCGACGTGGTG

Product: FeIII-dicitrate-binding periplasmic lipoprotein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MQTARLWGAAAISAALVTATVSGCTEKPTNETPSTLATSTTKIASAGVLGNARKPDESCAKDAAAVDPSAPREVRHAQGE
TEVPEDAKRIVVLDAGAIDTLCALGLQDRIVGVALADQAAAPPSYLGTTVHNLPSIGPMASPDLAKIGAAKPDLILSSAG
EQNSYLDLSAIAPTVIVSGHDLAEHVRLVGKATRRTADTDKLWTGFVDAAKKVGRENDAAHFQASIVQFTDQTVRVYGAN
NFPASVLATVGLDRPATQRFTDTPFIEIGTEDFSAAEGDIIYVSFTSSSAKDRAARIFGSKPWMALGATRDNRVFAVNNE
VWQTGDGIVAGRGILDDLQWVNAPIN

Sequences:

>Translated_346_residues
MQTARLWGAAAISAALVTATVSGCTEKPTNETPSTLATSTTKIASAGVLGNARKPDESCAKDAAAVDPSAPREVRHAQGE
TEVPEDAKRIVVLDAGAIDTLCALGLQDRIVGVALADQAAAPPSYLGTTVHNLPSIGPMASPDLAKIGAAKPDLILSSAG
EQNSYLDLSAIAPTVIVSGHDLAEHVRLVGKATRRTADTDKLWTGFVDAAKKVGRENDAAHFQASIVQFTDQTVRVYGAN
NFPASVLATVGLDRPATQRFTDTPFIEIGTEDFSAAEGDIIYVSFTSSSAKDRAARIFGSKPWMALGATRDNRVFAVNNE
VWQTGDGIVAGRGILDDLQWVNAPIN
>Mature_346_residues
MQTARLWGAAAISAALVTATVSGCTEKPTNETPSTLATSTTKIASAGVLGNARKPDESCAKDAAAVDPSAPREVRHAQGE
TEVPEDAKRIVVLDAGAIDTLCALGLQDRIVGVALADQAAAPPSYLGTTVHNLPSIGPMASPDLAKIGAAKPDLILSSAG
EQNSYLDLSAIAPTVIVSGHDLAEHVRLVGKATRRTADTDKLWTGFVDAAKKVGRENDAAHFQASIVQFTDQTVRVYGAN
NFPASVLATVGLDRPATQRFTDTPFIEIGTEDFSAAEGDIIYVSFTSSSAKDRAARIFGSKPWMALGATRDNRVFAVNNE
VWQTGDGIVAGRGILDDLQWVNAPIN

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable) [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 36236; Mature: 36236

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTARLWGAAAISAALVTATVSGCTEKPTNETPSTLATSTTKIASAGVLGNARKPDESCA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHH
KDAAAVDPSAPREVRHAQGETEVPEDAKRIVVLDAGAIDTLCALGLQDRIVGVALADQAA
HHHHCCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHCHHHHEEEEEECCCCC
APPSYLGTTVHNLPSIGPMASPDLAKIGAAKPDLILSSAGEQNSYLDLSAIAPTVIVSGH
CCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCEEEECCCCCCCCEEHHHCCCEEEECCC
DLAEHVRLVGKATRRTADTDKLWTGFVDAAKKVGRENDAAHFQASIVQFTDQTVRVYGAN
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECC
NFPASVLATVGLDRPATQRFTDTPFIEIGTEDFSAAEGDIIYVSFTSSSAKDRAARIFGS
CCCHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCHHHHHHHCCC
KPWMALGATRDNRVFAVNNEVWQTGDGIVAGRGILDDLQWVNAPIN
CCCEEEECCCCCEEEEECCCEEECCCCEEECCCHHHHHHHHCCCCC
>Mature Secondary Structure
MQTARLWGAAAISAALVTATVSGCTEKPTNETPSTLATSTTKIASAGVLGNARKPDESCA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHH
KDAAAVDPSAPREVRHAQGETEVPEDAKRIVVLDAGAIDTLCALGLQDRIVGVALADQAA
HHHHCCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHCHHHHEEEEEECCCCC
APPSYLGTTVHNLPSIGPMASPDLAKIGAAKPDLILSSAGEQNSYLDLSAIAPTVIVSGH
CCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCEEEECCCCCCCCEEHHHCCCEEEECCC
DLAEHVRLVGKATRRTADTDKLWTGFVDAAKKVGRENDAAHFQASIVQFTDQTVRVYGAN
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECC
NFPASVLATVGLDRPATQRFTDTPFIEIGTEDFSAAEGDIIYVSFTSSSAKDRAARIFGS
CCCHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCHHHHHHHCCC
KPWMALGATRDNRVFAVNNEVWQTGDGIVAGRGILDDLQWVNAPIN
CCCEEEECCCCCEEEEECCCEEECCCCEEECCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]