| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630441
Identifier: 169630441
GI number: 169630441
Start: 3408589
End: 3409332
Strand: Reverse
Name: 169630441
Synonym: MAB_3360c
Alternate gene names: NA
Gene position: 3409332-3408589 (Counterclockwise)
Preceding gene: 169630443
Following gene: 169630440
Centisome position: 67.28
GC content: 64.38
Gene sequence:
>744_bases ATGAAAATCACAGTTGTCGGTGCTACCGGCCAAATCGGTTCCCGGGTCGTGTCGTTGCTCATCGCGGACGGACATGATGT GGTGGCGGCGTCGTTGTCATCGGGAGCGAATGTGTTGACCGGTGAGGGACTGGTGGACGCGCTGACCGGATCGGCTGTGG TCATTGACGTTGTCAATTCGCCCTCGTTCGAGGACGGACCAGTCATGGACTTCTTCACCGCCTCCGCGCGCAATCTCGTC GACGCCGCGAAGGCGACCGGTGTCGGGCACTATGTCGCCTTGTCCATCGTCGGGGCGGACGGCCTGCCCGAGAGCGGTTA CATGCGTGCCAAGGTGGCGCAGGAAAAGATCATCGTCGGCTCGGGCCTGCCGTACACGATCGTGCGCGCGACGCAGTTTC AGGAGTTCGCGGAGGCGATCACCGACACGCTCGTGGTCGGCGACGAGGTACGCGTGCCCGATGCCAGGATCCAGCTGATC GCCGTGGACGACGTCTCCACGCAGGTGGCGCATGCCGCAGCGGCGGCACCTCGCAATGGCATCATCAACATCGGTGGGCC CGAGAAGTTTTCCTTCGCAGATATGGCCGGGGCGGTGCTCGCCGCACGCGGCGACGATCGGCCGGTCGTGGTGGATTCAG GCGCTACCTACTTCGGAACGCCGGTCGATGACTTCAGCCTGGTCACCGGCGACGACGGCGTGCTGACACAGACCCGGTTC GCCGACTGGATGGCACGTCGGTGA
Upstream 100 bases:
>100_bases CGATTGCCCCGTTCGGGCCGAACGACTACGGACTTTCCAGGGCGCGAACACGGCGTCGACCTGCGAGCGTTGTTTGTGTG ACCAGAAAGGTAATCACACA
Downstream 100 bases:
>100_bases CCTGCAAGAGCGTGCCCGCGTAGTTTCTGTTGGCTCAACGTTTGCTTTAGGGATTCACTTCCGCAAGCACGCATTTGGCG TACTGAACGCCGCAATTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NAD-Dependent Epimerase/Dehydratase; Secreted Protein; DTDP-4-Dehydrorhamnose Reductase; Nucleoside-Diphosphate Sugar Epimerase; Nucleoside-Diphosphate-Sugar Epimerase; NmrA-Like; Nucleotide-Diphosphate-Sugar Epimerase/NmrA Family Protein; GCN5-Related N-Acetyltransferase; Nmra-Like Family Protein; Transcriptional Regulator LysR-Family; LysR Family Transcriptional Regulator; NAD Dependent Epimerase/Dehydratase Family; NAD Dependent Epimerase/Dehydratase Family Protein; NmrA-Like Protein; NADH-Ubiquinone Oxidoreductase
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MKITVVGATGQIGSRVVSLLIADGHDVVAASLSSGANVLTGEGLVDALTGSAVVIDVVNSPSFEDGPVMDFFTASARNLV DAAKATGVGHYVALSIVGADGLPESGYMRAKVAQEKIIVGSGLPYTIVRATQFQEFAEAITDTLVVGDEVRVPDARIQLI AVDDVSTQVAHAAAAAPRNGIINIGGPEKFSFADMAGAVLAARGDDRPVVVDSGATYFGTPVDDFSLVTGDDGVLTQTRF ADWMARR
Sequences:
>Translated_247_residues MKITVVGATGQIGSRVVSLLIADGHDVVAASLSSGANVLTGEGLVDALTGSAVVIDVVNSPSFEDGPVMDFFTASARNLV DAAKATGVGHYVALSIVGADGLPESGYMRAKVAQEKIIVGSGLPYTIVRATQFQEFAEAITDTLVVGDEVRVPDARIQLI AVDDVSTQVAHAAAAAPRNGIINIGGPEKFSFADMAGAVLAARGDDRPVVVDSGATYFGTPVDDFSLVTGDDGVLTQTRF ADWMARR >Mature_247_residues MKITVVGATGQIGSRVVSLLIADGHDVVAASLSSGANVLTGEGLVDALTGSAVVIDVVNSPSFEDGPVMDFFTASARNLV DAAKATGVGHYVALSIVGADGLPESGYMRAKVAQEKIIVGSGLPYTIVRATQFQEFAEAITDTLVVGDEVRVPDARIQLI AVDDVSTQVAHAAAAAPRNGIINIGGPEKFSFADMAGAVLAARGDDRPVVVDSGATYFGTPVDDFSLVTGDDGVLTQTRF ADWMARR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25452; Mature: 25452
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITVVGATGQIGSRVVSLLIADGHDVVAASLSSGANVLTGEGLVDALTGSAVVIDVVNS CEEEEEECCCHHHHHEEEHEEECCCCEEEEECCCCCEEEECCCHHHHHCCCEEEEEEECC PSFEDGPVMDFFTASARNLVDAAKATGVGHYVALSIVGADGLPESGYMRAKVAQEKIIVG CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEECCCEEEEE SGLPYTIVRATQFQEFAEAITDTLVVGDEVRVPDARIQLIAVDDVSTQVAHAAAAAPRNG CCCCEEEEEHHHHHHHHHHHHHHEEECCCEECCCCEEEEEEECCCHHHHHHHHHCCCCCC IINIGGPEKFSFADMAGAVLAARGDDRPVVVDSGATYFGTPVDDFSLVTGDDGVLTQTRF EEECCCCCCCCHHHHHCEEEEECCCCCCEEEECCCEEECCCCCCCEEEECCCCCEEHHHH ADWMARR HHHHHCC >Mature Secondary Structure MKITVVGATGQIGSRVVSLLIADGHDVVAASLSSGANVLTGEGLVDALTGSAVVIDVVNS CEEEEEECCCHHHHHEEEHEEECCCCEEEEECCCCCEEEECCCHHHHHCCCEEEEEEECC PSFEDGPVMDFFTASARNLVDAAKATGVGHYVALSIVGADGLPESGYMRAKVAQEKIIVG CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEECCCEEEEE SGLPYTIVRATQFQEFAEAITDTLVVGDEVRVPDARIQLIAVDDVSTQVAHAAAAAPRNG CCCCEEEEEHHHHHHHHHHHHHHEEECCCEECCCCEEEEEEECCCHHHHHHHHHCCCCCC IINIGGPEKFSFADMAGAVLAARGDDRPVVVDSGATYFGTPVDDFSLVTGDDGVLTQTRF EEECCCCCCCCHHHHHCEEEEECCCCCCEEEECCCEEECCCCCCCEEEECCCCCEEHHHH ADWMARR HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA