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The map label for this gene is gatC

Identifier: 169630423

GI number: 169630423

Start: 3389661

End: 3389969

Strand: Reverse

Name: gatC

Synonym: MAB_3342c

Alternate gene names: 169630423

Gene position: 3389969-3389661 (Counterclockwise)

Preceding gene: 169630426

Following gene: 169630422

Centisome position: 66.9

GC content: 66.02

Gene sequence:

>309_bases
GTGAGCGCCATATCCCGTGACGAGGTCGCGCACCTGGCCAGACTGGCCCGGCTTGCGCTGACCGACGCTGAGCTGGACGG
ATACGCCGGGCAACTCGACGCGATCCTCGGCCACGTCAGCCAGATCAGTGCAGTTTCCACCGATGAGCTCGACGAGGTAG
ATGCCACGAGCTCGCCGCTTGATGCGGTCAATGTCACACGGCCCGATGTGATCGCCGAATGCCTTACCCCGGAGGAGGCG
CTGGCCGCGGCGCCCCGGGTGGCCGAGGGACGTTTCGCGGTGCCGCAGATTTTGGGGGAAGAAGAGTGA

Upstream 100 bases:

>100_bases
ACTTCCGGGACGGTCAGCGAGCTGTAGGCGCAGCAGATATGACGGCACGTCCAACACTGTGGCACAGGTCAGACACAGCC
GCCCTCTAGGCTATCTAGCC

Downstream 100 bases:

>100_bases
CCGACCTGATCAGGCAGGACGCCGCGGCGCTGGCCGCACTGATCCATTCGGGCGAGGTCTCCTCCGTCGAGGTGACACGT
GCGCATCTGGATCAGATCGC

Product: glutamyl-tRNA(Gln) amidotransferase subunit C (GatC)

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MSAISRDEVAHLARLARLALTDAELDGYAGQLDAILGHVSQISAVSTDELDEVDATSSPLDAVNVTRPDVIAECLTPEEA
LAAAPRVAEGRFAVPQILGEEE

Sequences:

>Translated_102_residues
MSAISRDEVAHLARLARLALTDAELDGYAGQLDAILGHVSQISAVSTDELDEVDATSSPLDAVNVTRPDVIAECLTPEEA
LAAAPRVAEGRFAVPQILGEEE
>Mature_101_residues
SAISRDEVAHLARLARLALTDAELDGYAGQLDAILGHVSQISAVSTDELDEVDATSSPLDAVNVTRPDVIAECLTPEEAL
AAAPRVAEGRFAVPQILGEEE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_MYCA9 (B1MDU9)

Other databases:

- EMBL:   CU458896
- RefSeq:   YP_001704072.1
- ProteinModelPortal:   B1MDU9
- SMR:   B1MDU9
- EnsemblBacteria:   EBMYCT00000004629
- GeneID:   5965842
- GenomeReviews:   CU458896_GR
- KEGG:   mab:MAB_3342c
- GeneTree:   EBGT00050000017278
- HOGENOM:   HBG586403
- OMA:   MFVAPRI
- BioCyc:   MABS561007:MAB_3342C-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 10710; Mature: 10579

Theoretical pI: Translated: 3.86; Mature: 3.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAISRDEVAHLARLARLALTDAELDGYAGQLDAILGHVSQISAVSTDELDEVDATSSPL
CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCC
DAVNVTRPDVIAECLTPEEALAAAPRVAEGRFAVPQILGEEE
CCCCCCCHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHCCCCC
>Mature Secondary Structure 
SAISRDEVAHLARLARLALTDAELDGYAGQLDAILGHVSQISAVSTDELDEVDATSSPL
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCC
DAVNVTRPDVIAECLTPEEALAAAPRVAEGRFAVPQILGEEE
CCCCCCCHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA