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The map label for this gene is ydgJ [H]

Identifier: 169630410

GI number: 169630410

Start: 3375307

End: 3375777

Strand: Reverse

Name: ydgJ [H]

Synonym: MAB_3329c

Alternate gene names: 169630410

Gene position: 3375777-3375307 (Counterclockwise)

Preceding gene: 169630412

Following gene: 169630408

Centisome position: 66.62

GC content: 66.88

Gene sequence:

>471_bases
GTGCCAAGACAGTCGAGTGGGGACAGCGCCCGTGAGATCGAAGAGCTGGTGGCGGCCACGGATGCGCTCTACTTCGCCAT
GCGCCGGGGCAGGACATCGCCCGCGGGGACACAGGCGGGCATGAGTCGTTCGCAGCTTGAGCTGCTGGCGCCGCTGCTTG
ATCAGGAGTCGATGTCCGTGAGCAGGCTCGCCGGGACGGCGGGCGTGGCGGTGCCGACGGCCACCCGTGCGCTCAAGCAG
CTGGAAGAGCGGGGGGTAGTCGCGCGCACCCGCTCATCATCCGATGATCGATTGGTATTGGTGGGGCTGACGTCTGGCGG
GCGCGCGCGGGTGATCAAGGCGCAGTCGGCCTTTCGGGCACGGCAGCAGGAGGTTTTCGAGGAACTCTCCGTCGCCGATC
GTCGTGCGATGACCGACAGTCTGACCCGCCTTGCGGCGCTCATCAACGACAATATGGACGCGCGCGCTTAA

Upstream 100 bases:

>100_bases
GCGCCGATGATCGCTACCCGCATGTGTCCGTCCTTTCACTGGCTTCACCCGATTAAGTTAGCATGCTAACTATTACCATG
CTAACCCCTACACTGGGTAG

Downstream 100 bases:

>100_bases
CGTTTGGCGAAAATTGTTCGGTGCCAGTCTTTGTCTGCGGTGCCGGTGATGTCGCTCATCACGTGCTTGACGGTGAGATA
CTCCTCGAGGGAGTAGTCGG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MPRQSSGDSAREIEELVAATDALYFAMRRGRTSPAGTQAGMSRSQLELLAPLLDQESMSVSRLAGTAGVAVPTATRALKQ
LEERGVVARTRSSSDDRLVLVGLTSGGRARVIKAQSAFRARQQEVFEELSVADRRAMTDSLTRLAALINDNMDARA

Sequences:

>Translated_156_residues
MPRQSSGDSAREIEELVAATDALYFAMRRGRTSPAGTQAGMSRSQLELLAPLLDQESMSVSRLAGTAGVAVPTATRALKQ
LEERGVVARTRSSSDDRLVLVGLTSGGRARVIKAQSAFRARQQEVFEELSVADRRAMTDSLTRLAALINDNMDARA
>Mature_155_residues
PRQSSGDSAREIEELVAATDALYFAMRRGRTSPAGTQAGMSRSQLELLAPLLDQESMSVSRLAGTAGVAVPTATRALKQL
EERGVVARTRSSSDDRLVLVGLTSGGRARVIKAQSAFRARQQEVFEELSVADRRAMTDSLTRLAALINDNMDARA

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16793; Mature: 16662

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRQSSGDSAREIEELVAATDALYFAMRRGRTSPAGTQAGMSRSQLELLAPLLDQESMSV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHCCCHHHH
SRLAGTAGVAVPTATRALKQLEERGVVARTRSSSDDRLVLVGLTSGGRARVIKAQSAFRA
HHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEECCCCCEEEEEHHHHHHH
RQQEVFEELSVADRRAMTDSLTRLAALINDNMDARA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PRQSSGDSAREIEELVAATDALYFAMRRGRTSPAGTQAGMSRSQLELLAPLLDQESMSV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHCCCHHHH
SRLAGTAGVAVPTATRALKQLEERGVVARTRSSSDDRLVLVGLTSGGRARVIKAQSAFRA
HHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEECCCCCEEEEEHHHHHHH
RQQEVFEELSVADRRAMTDSLTRLAALINDNMDARA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]