| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169630399
Identifier: 169630399
GI number: 169630399
Start: 3363815
End: 3364780
Strand: Direct
Name: 169630399
Synonym: MAB_3318
Alternate gene names: NA
Gene position: 3363815-3364780 (Clockwise)
Preceding gene: 169630397
Following gene: 169630400
Centisome position: 66.38
GC content: 65.11
Gene sequence:
>966_bases GTGCTACGCCTCATTTTCACCGCGAATGACCTTGCCTTGACCCGGTTTCTGCCTATGCCCGCCCCCTTGTTGGAAATGAA ATTTGCGACACGCGCGCTACGGCGTGGGATTCGTACCCCGTGGGGTGAGCGGTGGCGTTGCCATGCGTTGGCGGCGTTCC CGATCGCGACGGCGCCGGGGCGGGCAGTGGTGAGCCACTTTTCGTGGTCATTGTCGCCGACCGTGCTGGGTGACGATTTC GACGAAGGCATGCAATCCATAGAAAAACTGGACCGGCGGCAGGCACAGGCAGAGTTGGCCGTCTTCGGACGCGGGCCCAC CGAAGGCGCAGGGGCGCCACACTATCTCCGGCACGCCATCGCGGGCGATCGTGAGGCCACTAGGGCGTTGGGGCGCATGA CAAAAGACGCATACAGGGCGGTGCTGGAACCGTACTGGCCGGAAATCCAGGCGAACCATCAGATCGAACTTGTCAGGCAA GGGCGCGCGATGGCGCGCCATGGCGTGCGGGCCGCACTCGGCATGATCATTCCAGGGGCGCGCTGGAATGGTGATTGTCT CGAAATCGACAGTCCGCAACGGCACACCATCGCGTTACGCGGTCGCGGCATGGTCTTGACGCCCAGCATTTTCTGGGCTG GGCCACCGCTGGTCGGCGAACTCGACGAACAGCCGGTGGTCCTCGCGTATCCCGCACCCATCGATTTGACCCTCACTATC GGCACCGAATCCGATCCGCTCGCGGCGATTCTCGGATCGACCCGGGCGGCCGTGTTGCGCCTGCTGGCTGAGCAACACAC CACCGGTGACATCGCCCGCAATCTCGGGATCAGCCCCGCGTCGGCCTCGGAGCACACCTCGGCGCTGCGGCACGCCCGCT TGGTGCGCAGCCGTCGCGACGGCAAGGCGGTCATTCACGACGCCACCGCCCTGGGAATGGACCTGATCGACGCCAACCGC CGGTAG
Upstream 100 bases:
>100_bases CGGCTTCACCCAGCGCGACGTTTCTCGGGCGCGCCAGAAAGTATGGGCATATGGTGGTGGAATGCTCGTCATAGCGGTCC GGAGCAGGCTGTAGGTCAGC
Downstream 100 bases:
>100_bases CCGGCAGTGGCGGTTACAGCATCGGAGCCACCTCGGTAACAATTGCGCGCGGCGCTGTTGACAACTGGCGTTGTTAACGT TTCCAATACTAGGTAGCAAA
Product: putative regulatory protein
Products: NA
Alternate protein names: Regulatory Protein; Regulatory Protein ArsR; Transcriptional Regulator ArsR Family; Transcriptional Regulator; MarR Family Transcriptional Regulator; ArsR-Family Transcriptional Regulator; ArsR Family Regulatory Protein; PE-PGRS Family Protein
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MLRLIFTANDLALTRFLPMPAPLLEMKFATRALRRGIRTPWGERWRCHALAAFPIATAPGRAVVSHFSWSLSPTVLGDDF DEGMQSIEKLDRRQAQAELAVFGRGPTEGAGAPHYLRHAIAGDREATRALGRMTKDAYRAVLEPYWPEIQANHQIELVRQ GRAMARHGVRAALGMIIPGARWNGDCLEIDSPQRHTIALRGRGMVLTPSIFWAGPPLVGELDEQPVVLAYPAPIDLTLTI GTESDPLAAILGSTRAAVLRLLAEQHTTGDIARNLGISPASASEHTSALRHARLVRSRRDGKAVIHDATALGMDLIDANR R
Sequences:
>Translated_321_residues MLRLIFTANDLALTRFLPMPAPLLEMKFATRALRRGIRTPWGERWRCHALAAFPIATAPGRAVVSHFSWSLSPTVLGDDF DEGMQSIEKLDRRQAQAELAVFGRGPTEGAGAPHYLRHAIAGDREATRALGRMTKDAYRAVLEPYWPEIQANHQIELVRQ GRAMARHGVRAALGMIIPGARWNGDCLEIDSPQRHTIALRGRGMVLTPSIFWAGPPLVGELDEQPVVLAYPAPIDLTLTI GTESDPLAAILGSTRAAVLRLLAEQHTTGDIARNLGISPASASEHTSALRHARLVRSRRDGKAVIHDATALGMDLIDANR R >Mature_321_residues MLRLIFTANDLALTRFLPMPAPLLEMKFATRALRRGIRTPWGERWRCHALAAFPIATAPGRAVVSHFSWSLSPTVLGDDF DEGMQSIEKLDRRQAQAELAVFGRGPTEGAGAPHYLRHAIAGDREATRALGRMTKDAYRAVLEPYWPEIQANHQIELVRQ GRAMARHGVRAALGMIIPGARWNGDCLEIDSPQRHTIALRGRGMVLTPSIFWAGPPLVGELDEQPVVLAYPAPIDLTLTI GTESDPLAAILGSTRAAVLRLLAEQHTTGDIARNLGISPASASEHTSALRHARLVRSRRDGKAVIHDATALGMDLIDANR R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35131; Mature: 35131
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLIFTANDLALTRFLPMPAPLLEMKFATRALRRGIRTPWGERWRCHALAAFPIATAPG CEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCC RAVVSHFSWSLSPTVLGDDFDEGMQSIEKLDRRQAQAELAVFGRGPTEGAGAPHYLRHAI HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHH AGDREATRALGRMTKDAYRAVLEPYWPEIQANHQIELVRQGRAMARHGVRAALGMIIPGA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC RWNGDCLEIDSPQRHTIALRGRGMVLTPSIFWAGPPLVGELDEQPVVLAYPAPIDLTLTI CCCCCEEECCCCCCEEEEEECCCEEECCCCEECCCCCCCCCCCCCEEEEECCCEEEEEEE GTESDPLAAILGSTRAAVLRLLAEQHTTGDIARNLGISPASASEHTSALRHARLVRSRRD CCCCCCHHHHHCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC GKAVIHDATALGMDLIDANRR CCEEEEHHHHHHHHHHCCCCC >Mature Secondary Structure MLRLIFTANDLALTRFLPMPAPLLEMKFATRALRRGIRTPWGERWRCHALAAFPIATAPG CEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCC RAVVSHFSWSLSPTVLGDDFDEGMQSIEKLDRRQAQAELAVFGRGPTEGAGAPHYLRHAI HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHH AGDREATRALGRMTKDAYRAVLEPYWPEIQANHQIELVRQGRAMARHGVRAALGMIIPGA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC RWNGDCLEIDSPQRHTIALRGRGMVLTPSIFWAGPPLVGELDEQPVVLAYPAPIDLTLTI CCCCCEEECCCCCCEEEEEECCCEEECCCCEECCCCCCCCCCCCCEEEEECCCEEEEEEE GTESDPLAAILGSTRAAVLRLLAEQHTTGDIARNLGISPASASEHTSALRHARLVRSRRD CCCCCCHHHHHCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC GKAVIHDATALGMDLIDANRR CCEEEEHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA