| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630383
Identifier: 169630383
GI number: 169630383
Start: 3340400
End: 3341602
Strand: Direct
Name: 169630383
Synonym: MAB_3302
Alternate gene names: NA
Gene position: 3340400-3341602 (Clockwise)
Preceding gene: 169630382
Following gene: 169630389
Centisome position: 65.92
GC content: 68.16
Gene sequence:
>1203_bases ATGGTGACCATGGTTCACGTCGATGAGGTTGGTACAGCACGCCGTTGGGCGATGCTGGCCATTGCTTTGGGGTCCACCGC TGGAGCGAATGTCTTCATCAACGGTGTGGCGTTCCTCATCCCGGCCCTGCACGCCGAGCGTGGACTCGACCTGGCCAACG CGGGGCTGCTGTCCGCCATGCCGAGCTTCGGCATGGTCTTGACGCTCATCGCCTGGGGGGCACTCATCGACAAATTCGGT GAGCGCATCGCGTTGGTGAGCGGCCTGGCGCTGACCGCCGTGGCCGCGTTCGCGGCCGCGGAATCCCCGTCGCTGACCGT GACTGGCGCATTCCTGCTGCTGGGTGGGGCGGCCGCGGCCGCCTGCAACTCAGCCAGTGGACGCGTGGTGGTCGGGTGGT TCCCACCCCACCAGCGCGGGACGGTCATGGGTATCCGCCAGATGGCGCAACCGCTGGGCGTCGCGGCCGGTGCGCTCGTC ATCCCGCGCATTGCCGAGGGTCACGGCGTCGCGACCGCACTGCTCTTTCCCGCGATCGTGTGCGCGGTGTCTTCAGCGGT GTGTCTGGTCGGCATCATCGACCCGCCGCGGCCGCCCCGTTCGGAGGCACCCGAGGAACATCTGGCCAATCCCTACCGCG GGTCACGCGTGCTGTGGCTGATTCACGGGGTGTCGGTGCTGTTGGTGGTCCCTCAGGTGGTCGTGTGGACCTTCACGCTG GTATGGCTGGTCACCGACAGGGGCTGGAGCATCGGCGCGGCCAGCGTGATGGTGACGGTGGCGCAACTGGTCGGTGCGCT TGGCCGGGTCGCCGCCGGAATGTGGTCCGACCGTTGGGGTTCGCGGATGAGGCCGATCCGGGCCATCGCCGCGGCCGCAT CGGCGACCATGGCGTTGCTGGCCGTCACCAACCAACTCGATTGGTCCGTCAGCGTCGTCGTCATGCTGGTGGCTTCGGTG ATCACCGTGTCGGACAACGGGCTTGCCTACACCTCGATCGCCGAGATCGCCGGACCATTCTGGAGCGGCCGCGCCCTGGG TGCCCAGAACACCGGCCAGCTGCTGGCCGCTGCCGTGGCGCCGCCAATATTCGGAGCCATTGCCGCGGCGGCGGGATTCT CCGCGGCATTCGCCGTGTGTGCGCTGTTCCCGCTGGCAGCAGTCGGTTTGGTGCCGGTGAAGTTGGAGCGGCCGGCCCCC TAA
Upstream 100 bases:
>100_bases GGGATCGCACCTATCGACGACACGACAATCTCGCCACCGCGAGCTAGCACGTCTCATATATTGAGACATGTATTCAATAG TTTGAGATAGGTGTGGAACC
Downstream 100 bases:
>100_bases TGCCGAATGCGAGCCCGGCGCGGATCTCCCCGCGCGAGGCTCGCATTCGATCAGGACTACAGGAAGCTGGCGATCCGATC GCCAGTCGCCGAGGTGGACA
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MVTMVHVDEVGTARRWAMLAIALGSTAGANVFINGVAFLIPALHAERGLDLANAGLLSAMPSFGMVLTLIAWGALIDKFG ERIALVSGLALTAVAAFAAAESPSLTVTGAFLLLGGAAAAACNSASGRVVVGWFPPHQRGTVMGIRQMAQPLGVAAGALV IPRIAEGHGVATALLFPAIVCAVSSAVCLVGIIDPPRPPRSEAPEEHLANPYRGSRVLWLIHGVSVLLVVPQVVVWTFTL VWLVTDRGWSIGAASVMVTVAQLVGALGRVAAGMWSDRWGSRMRPIRAIAAAASATMALLAVTNQLDWSVSVVVMLVASV ITVSDNGLAYTSIAEIAGPFWSGRALGAQNTGQLLAAAVAPPIFGAIAAAAGFSAAFAVCALFPLAAVGLVPVKLERPAP
Sequences:
>Translated_400_residues MVTMVHVDEVGTARRWAMLAIALGSTAGANVFINGVAFLIPALHAERGLDLANAGLLSAMPSFGMVLTLIAWGALIDKFG ERIALVSGLALTAVAAFAAAESPSLTVTGAFLLLGGAAAAACNSASGRVVVGWFPPHQRGTVMGIRQMAQPLGVAAGALV IPRIAEGHGVATALLFPAIVCAVSSAVCLVGIIDPPRPPRSEAPEEHLANPYRGSRVLWLIHGVSVLLVVPQVVVWTFTL VWLVTDRGWSIGAASVMVTVAQLVGALGRVAAGMWSDRWGSRMRPIRAIAAAASATMALLAVTNQLDWSVSVVVMLVASV ITVSDNGLAYTSIAEIAGPFWSGRALGAQNTGQLLAAAVAPPIFGAIAAAAGFSAAFAVCALFPLAAVGLVPVKLERPAP >Mature_400_residues MVTMVHVDEVGTARRWAMLAIALGSTAGANVFINGVAFLIPALHAERGLDLANAGLLSAMPSFGMVLTLIAWGALIDKFG ERIALVSGLALTAVAAFAAAESPSLTVTGAFLLLGGAAAAACNSASGRVVVGWFPPHQRGTVMGIRQMAQPLGVAAGALV IPRIAEGHGVATALLFPAIVCAVSSAVCLVGIIDPPRPPRSEAPEEHLANPYRGSRVLWLIHGVSVLLVVPQVVVWTFTL VWLVTDRGWSIGAASVMVTVAQLVGALGRVAAGMWSDRWGSRMRPIRAIAAAASATMALLAVTNQLDWSVSVVVMLVASV ITVSDNGLAYTSIAEIAGPFWSGRALGAQNTGQLLAAAVAPPIFGAIAAAAGFSAAFAVCALFPLAAVGLVPVKLERPAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Homo sapiens, GI256219598, Length=260, Percent_Identity=24.6153846153846, Blast_Score=65, Evalue=9e-11, Organism=Homo sapiens, GI4503847, Length=260, Percent_Identity=24.6153846153846, Blast_Score=65, Evalue=9e-11, Organism=Homo sapiens, GI256219483, Length=260, Percent_Identity=24.6153846153846, Blast_Score=65, Evalue=9e-11, Organism=Homo sapiens, GI256219543, Length=260, Percent_Identity=24.6153846153846, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 40878; Mature: 40878
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTMVHVDEVGTARRWAMLAIALGSTAGANVFINGVAFLIPALHAERGLDLANAGLLSAM CEEEEEECCCCCHHHHHHHHEEECCCCCCCEEEHHHHHHHHHHHHHCCCCHHCCHHHHHC PSFGMVLTLIAWGALIDKFGERIALVSGLALTAVAAFAAAESPSLTVTGAFLLLGGAAAA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHCCHHHH ACNSASGRVVVGWFPPHQRGTVMGIRQMAQPLGVAAGALVIPRIAEGHGVATALLFPAIV HCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH CAVSSAVCLVGIIDPPRPPRSEAPEEHLANPYRGSRVLWLIHGVSVLLVVPQVVVWTFTL HHHHHHHEEEEECCCCCCCCCCCCHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH VWLVTDRGWSIGAASVMVTVAQLVGALGRVAAGMWSDRWGSRMRPIRAIAAAASATMALL HHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHH AVTNQLDWSVSVVVMLVASVITVSDNGLAYTSIAEIAGPFWSGRALGAQNTGQLLAAAVA HHHCCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHC PPIFGAIAAAAGFSAAFAVCALFPLAAVGLVPVKLERPAP CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC >Mature Secondary Structure MVTMVHVDEVGTARRWAMLAIALGSTAGANVFINGVAFLIPALHAERGLDLANAGLLSAM CEEEEEECCCCCHHHHHHHHEEECCCCCCCEEEHHHHHHHHHHHHHCCCCHHCCHHHHHC PSFGMVLTLIAWGALIDKFGERIALVSGLALTAVAAFAAAESPSLTVTGAFLLLGGAAAA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHCCHHHH ACNSASGRVVVGWFPPHQRGTVMGIRQMAQPLGVAAGALVIPRIAEGHGVATALLFPAIV HCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH CAVSSAVCLVGIIDPPRPPRSEAPEEHLANPYRGSRVLWLIHGVSVLLVVPQVVVWTFTL HHHHHHHEEEEECCCCCCCCCCCCHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH VWLVTDRGWSIGAASVMVTVAQLVGALGRVAAGMWSDRWGSRMRPIRAIAAAASATMALL HHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHH AVTNQLDWSVSVVVMLVASVITVSDNGLAYTSIAEIAGPFWSGRALGAQNTGQLLAAAVA HHHCCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHC PPIFGAIAAAAGFSAAFAVCALFPLAAVGLVPVKLERPAP CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]