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The map label for this gene is gpsA2 [H]

Identifier: 169630369

GI number: 169630369

Start: 3326397

End: 3327428

Strand: Reverse

Name: gpsA2 [H]

Synonym: MAB_3288c

Alternate gene names: 169630369

Gene position: 3327428-3326397 (Counterclockwise)

Preceding gene: 169630373

Following gene: 169630368

Centisome position: 65.67

GC content: 65.5

Gene sequence:

>1032_bases
ATGGCCACGGATGAGCCGCTTGCGGGAAGACGACCAGTCAAAGCTGCGGTGATGGGTGCTGGTTCCTGGGGGACCGCGTT
GGGCAAGGTGCTTGCCGACGCGGGCCACGATGTCCGTTTGTGGGCACGCCGATCCGAATTGGCCGACGAGATCAATGCGA
CGCACCGTAACTCGGTGTATCTCAGTGACGTGGATCTGCCCGCGTCGATTGTCGCCACCGGTGTGGCAGAAGAGGCCCTG
CAGGGCGCCGAGCTGGTCTTGCTGGCCGTTCCGTCGCAGTCGTTGCGCGCGAATCTGACCCCGTGGGCCGATCTCATCGA
GCCGAATTCCTCGGTGGTGAGTCTGGCCAAGGGCATCGAGGTGGGCACACTCATGCGGATGAGCCAGGTCGTCACGCAGG
TGCTGGGTACCGATCCCAGCCGGGTAGCGGTGCTCACCGGCCCGAATCTTGCCAGCGAGATCGCGGCGGGTCAGCCCGCC
GCCACCGTCATCGGCTGTACCGATTCCACGAGGGCCGTCGCACTGCAGCGTGCTTTTTCCACCCGCTACTTCCGTCCTTA
CACCAATTCCGATGTCGTGGGCTGCGAGGTGGGCGGCGCGTGCAAGAACGTGATCGCGCTCAGCTGCGGCATGGCCGCCG
GAGTTGGGTTGGGGGAGAACACGATAGCCACGATCATCACCCGGGGCCTGGCCGAGATCACCCGGCTGGGACTGGCGCTC
GGTGCCAGCCACACCACCCTGGCGGGGCTGGCCGGCGTCGGAGATCTGGTGGCCACCTGTACCTCGGCGCATTCGCGGAA
CCGGACTTTCGGTATGCGGCTGGGCAACGGCGAGACACTGCAAGAGGCGCGCAACGCCGCCGGCGGTAGGGTCGCCGAGG
GAGTTACCTCATGTGAGTCCATCTTGGCGCTGGCGTCGAGCTATGACGTCGAGATGCCGCTCACCGAGGCTGTTCATGGC
GTTTGTCATCGCGGACTGAGCGTCACCGATGCCGTCGCCCAGCTGTTGGGGCGCAGTACCAAACCGGAGTAA

Upstream 100 bases:

>100_bases
CGCGGTCGCCAGGTTCTTGACCGCGATGATCACGCCGAAGTCTGTGCCAGCCTGTCTGCCCACGTACTCCATGGTGCCAG
CCCCGGCTAGGGTGTCTGCC

Downstream 100 bases:

>100_bases
GCATATGCCAGAGCCAGGGATATCGACCCGGGCCGTAGTGGCCGCCACTGCCGAACCCGTTGCCGGACAACCCTTTCTCG
CGGGACCGGTGTTCGCCTCC

Product: glycerol-3-phosphate dehydrogenase, NAD-dependent

Products: NA

Alternate protein names: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 2 [H]

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MATDEPLAGRRPVKAAVMGAGSWGTALGKVLADAGHDVRLWARRSELADEINATHRNSVYLSDVDLPASIVATGVAEEAL
QGAELVLLAVPSQSLRANLTPWADLIEPNSSVVSLAKGIEVGTLMRMSQVVTQVLGTDPSRVAVLTGPNLASEIAAGQPA
ATVIGCTDSTRAVALQRAFSTRYFRPYTNSDVVGCEVGGACKNVIALSCGMAAGVGLGENTIATIITRGLAEITRLGLAL
GASHTTLAGLAGVGDLVATCTSAHSRNRTFGMRLGNGETLQEARNAAGGRVAEGVTSCESILALASSYDVEMPLTEAVHG
VCHRGLSVTDAVAQLLGRSTKPE

Sequences:

>Translated_343_residues
MATDEPLAGRRPVKAAVMGAGSWGTALGKVLADAGHDVRLWARRSELADEINATHRNSVYLSDVDLPASIVATGVAEEAL
QGAELVLLAVPSQSLRANLTPWADLIEPNSSVVSLAKGIEVGTLMRMSQVVTQVLGTDPSRVAVLTGPNLASEIAAGQPA
ATVIGCTDSTRAVALQRAFSTRYFRPYTNSDVVGCEVGGACKNVIALSCGMAAGVGLGENTIATIITRGLAEITRLGLAL
GASHTTLAGLAGVGDLVATCTSAHSRNRTFGMRLGNGETLQEARNAAGGRVAEGVTSCESILALASSYDVEMPLTEAVHG
VCHRGLSVTDAVAQLLGRSTKPE
>Mature_342_residues
ATDEPLAGRRPVKAAVMGAGSWGTALGKVLADAGHDVRLWARRSELADEINATHRNSVYLSDVDLPASIVATGVAEEALQ
GAELVLLAVPSQSLRANLTPWADLIEPNSSVVSLAKGIEVGTLMRMSQVVTQVLGTDPSRVAVLTGPNLASEIAAGQPAA
TVIGCTDSTRAVALQRAFSTRYFRPYTNSDVVGCEVGGACKNVIALSCGMAAGVGLGENTIATIITRGLAEITRLGLALG
ASHTTLAGLAGVGDLVATCTSAHSRNRTFGMRLGNGETLQEARNAAGGRVAEGVTSCESILALASSYDVEMPLTEAVHGV
CHRGLSVTDAVAQLLGRSTKPE

Specific function: De novo phospholipid biosynthesis; glycerol-3 phosphate formation. [C]

COG id: COG0240

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI33695088, Length=339, Percent_Identity=30.0884955752212, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI24307999, Length=354, Percent_Identity=28.8135593220339, Blast_Score=124, Evalue=1e-28,
Organism=Escherichia coli, GI1790037, Length=335, Percent_Identity=40.5970149253731, Blast_Score=231, Evalue=6e-62,
Organism=Caenorhabditis elegans, GI32564399, Length=344, Percent_Identity=27.6162790697674, Blast_Score=130, Evalue=8e-31,
Organism=Caenorhabditis elegans, GI32564403, Length=353, Percent_Identity=27.1954674220963, Blast_Score=128, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI193210136, Length=342, Percent_Identity=27.4853801169591, Blast_Score=127, Evalue=8e-30,
Organism=Caenorhabditis elegans, GI17507425, Length=341, Percent_Identity=29.0322580645161, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI193210134, Length=317, Percent_Identity=26.4984227129338, Blast_Score=98, Evalue=5e-21,
Organism=Saccharomyces cerevisiae, GI6324513, Length=350, Percent_Identity=29.1428571428571, Blast_Score=149, Evalue=5e-37,
Organism=Saccharomyces cerevisiae, GI6320181, Length=352, Percent_Identity=27.5568181818182, Blast_Score=129, Evalue=9e-31,
Organism=Drosophila melanogaster, GI17136200, Length=340, Percent_Identity=30.2941176470588, Blast_Score=140, Evalue=9e-34,
Organism=Drosophila melanogaster, GI17136202, Length=340, Percent_Identity=30.2941176470588, Blast_Score=140, Evalue=1e-33,
Organism=Drosophila melanogaster, GI17136204, Length=340, Percent_Identity=30.2941176470588, Blast_Score=140, Evalue=1e-33,
Organism=Drosophila melanogaster, GI22026922, Length=331, Percent_Identity=26.8882175226586, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI45551945, Length=335, Percent_Identity=26.865671641791, Blast_Score=102, Evalue=5e-22,
Organism=Drosophila melanogaster, GI281362270, Length=300, Percent_Identity=27.3333333333333, Blast_Score=95, Evalue=6e-20,
Organism=Drosophila melanogaster, GI24648969, Length=288, Percent_Identity=27.0833333333333, Blast_Score=93, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR006168
- InterPro:   IPR006109
- InterPro:   IPR011128
- InterPro:   IPR016040 [H]

Pfam domain/function: PF07479 NAD_Gly3P_dh_C; PF01210 NAD_Gly3P_dh_N [H]

EC number: =1.1.1.94 [H]

Molecular weight: Translated: 35224; Mature: 35093

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: PS00957 NAD_G3PDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATDEPLAGRRPVKAAVMGAGSWGTALGKVLADAGHDVRLWARRSELADEINATHRNSVY
CCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCEE
LSDVDLPASIVATGVAEEALQGAELVLLAVPSQSLRANLTPWADLIEPNSSVVSLAKGIE
EECCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCHHHHHCCCHHHHHHHHCCC
VGTLMRMSQVVTQVLGTDPSRVAVLTGPNLASEIAAGQPAATVIGCTDSTRAVALQRAFS
HHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHH
TRYFRPYTNSDVVGCEVGGACKNVIALSCGMAAGVGLGENTIATIITRGLAEITRLGLAL
HCCCCCCCCCCEEEECCCHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
GASHTTLAGLAGVGDLVATCTSAHSRNRTFGMRLGNGETLQEARNAAGGRVAEGVTSCES
CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHH
ILALASSYDVEMPLTEAVHGVCHRGLSVTDAVAQLLGRSTKPE
HHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ATDEPLAGRRPVKAAVMGAGSWGTALGKVLADAGHDVRLWARRSELADEINATHRNSVY
CCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCEE
LSDVDLPASIVATGVAEEALQGAELVLLAVPSQSLRANLTPWADLIEPNSSVVSLAKGIE
EECCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCHHHHHCCCHHHHHHHHCCC
VGTLMRMSQVVTQVLGTDPSRVAVLTGPNLASEIAAGQPAATVIGCTDSTRAVALQRAFS
HHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHH
TRYFRPYTNSDVVGCEVGGACKNVIALSCGMAAGVGLGENTIATIITRGLAEITRLGLAL
HCCCCCCCCCCEEEECCCHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
GASHTTLAGLAGVGDLVATCTSAHSRNRTFGMRLGNGETLQEARNAAGGRVAEGVTSCES
CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHH
ILALASSYDVEMPLTEAVHGVCHRGLSVTDAVAQLLGRSTKPE
HHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA