Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

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The map label for this gene is 169630363

Identifier: 169630363

GI number: 169630363

Start: 3320595

End: 3321845

Strand: Reverse

Name: 169630363

Synonym: MAB_3282c

Alternate gene names: NA

Gene position: 3321845-3320595 (Counterclockwise)

Preceding gene: 169630364

Following gene: 169630360

Centisome position: 65.56

GC content: 67.31

Gene sequence:

>1251_bases
ATGCGTTGGTCGACGGGAGCGTTCGCGGCGCTCGGCGGTATCACGGCGGCGGTGGCGACCGGTGGCACCGCGCTGCGCAG
CCCCGTGGTGGTTGATCGACTCAACGACTGGGCCGCGCGCCGGCTCACGGTGCAGCAGCGCGCGGACCCGTACGCCGCGA
TTCTCCCGACTCCGATCAGCGGTGACGATTTCTACGGTGACCCGGGTGATCTGGGCCTGCTGGCACCCGGGGAGGTGGTC
CGCGCGGACCGGGTCACGCCGCGCCTGCCGCTGCGCCGGGCGACCATGCAGCGAATCATGGTGCGCTCCACCGACACCGC
CGGCAACCCGGTGCCCGTGACCGCGGCACTGATTGAGCCAGAGCGTCCGTGGCGCGGTCCGGGATCTCGTCCCGTGGTGG
TGCGCAACCAGGCGATCAACTCGTTGGGGCTCAAGTTCACGCCGTCTTATCGTTTGACGCACCTGTGGTATCGGGACAAC
CCCCCGATGTTCCCGTTCCTGTCGGCACAGAACTACGCGGTGCTGTTCCCGGACCATGAAGGCCCCCGGATGTCCTACGC
GGCAGGGAAAATGGCAGGCCATGCGGTGCTGGACTCGGTACGCGGAATGCTTTCGGAAAGGCCGGATCTCGCCGAGTCGC
CGATCGTCATGCACGGCTACAGCGGCGGGGCGATCGCCACGGCGTGGGCGGCGCAGCTGCAGCCCACCTACGCTCCGGAG
CTGCGGATCGCCGGCGCGGCCGCAGGGGGAACGCCCACCGACTACGCTCTGTTGTACGGCAGCATGAACCGAGGCGTGGG
CGCCGGGCTTTTTGCCGCTGCCACCATCGGCCAGGCCCGCGAATTCCCGGAACTGGTACAGATTTTCGGGGATTTCGCGC
TCTACTGCGCGATCCGTGCCAAGAACATGCCGCAGCCTCCATTGGCCGCTGCGGGTTTGTTGCGATTCGACCTGGATCTG
CTCGCGGCGATCGCCAAGCCGTTCGAGTCGGAGTTGGGACAACACGTTATCGCCGCAAACCGGCCGGGCGCTCTCACCCC
GACAATGCCTGTGCTGCTCTACCACGGCTCGCGCAGTAAGGCGGTGGGCGATTTGTTCATCCCGGAAGAGGGTGCCCTGG
CGCTGCGCGATGCCTGGCGTGCCAACGGGGCCGATGTCGATTACTGGGCGCTGCCCGGCGAGCACGTCACCGCGGATATG
TTCGCGATCCCGTGGGTCGTCAACTGGATCCGGAGAAAGCTACTGGGATGA

Upstream 100 bases:

>100_bases
TGTCGGCCTCGCGCGGCTTCTTTGGTTCCAAACCCTTCAGCCGGGCGAATGAGCTGCTGGTCGGTTTGGGCGCACAGCCG
GTCGACTGGCGGTTGCCGTA

Downstream 100 bases:

>100_bases
GCGTTGGCGCGAAGACGGCGGAACTGGGATGAGCGTTGGCGCGAAGACCGCGGAACTGGGATGAGCGTTGGCGCGAAGAC
CGCGGAACTCGGCTAGCTCA

Product: lipase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MRWSTGAFAALGGITAAVATGGTALRSPVVVDRLNDWAARRLTVQQRADPYAAILPTPISGDDFYGDPGDLGLLAPGEVV
RADRVTPRLPLRRATMQRIMVRSTDTAGNPVPVTAALIEPERPWRGPGSRPVVVRNQAINSLGLKFTPSYRLTHLWYRDN
PPMFPFLSAQNYAVLFPDHEGPRMSYAAGKMAGHAVLDSVRGMLSERPDLAESPIVMHGYSGGAIATAWAAQLQPTYAPE
LRIAGAAAGGTPTDYALLYGSMNRGVGAGLFAAATIGQAREFPELVQIFGDFALYCAIRAKNMPQPPLAAAGLLRFDLDL
LAAIAKPFESELGQHVIAANRPGALTPTMPVLLYHGSRSKAVGDLFIPEEGALALRDAWRANGADVDYWALPGEHVTADM
FAIPWVVNWIRRKLLG

Sequences:

>Translated_416_residues
MRWSTGAFAALGGITAAVATGGTALRSPVVVDRLNDWAARRLTVQQRADPYAAILPTPISGDDFYGDPGDLGLLAPGEVV
RADRVTPRLPLRRATMQRIMVRSTDTAGNPVPVTAALIEPERPWRGPGSRPVVVRNQAINSLGLKFTPSYRLTHLWYRDN
PPMFPFLSAQNYAVLFPDHEGPRMSYAAGKMAGHAVLDSVRGMLSERPDLAESPIVMHGYSGGAIATAWAAQLQPTYAPE
LRIAGAAAGGTPTDYALLYGSMNRGVGAGLFAAATIGQAREFPELVQIFGDFALYCAIRAKNMPQPPLAAAGLLRFDLDL
LAAIAKPFESELGQHVIAANRPGALTPTMPVLLYHGSRSKAVGDLFIPEEGALALRDAWRANGADVDYWALPGEHVTADM
FAIPWVVNWIRRKLLG
>Mature_416_residues
MRWSTGAFAALGGITAAVATGGTALRSPVVVDRLNDWAARRLTVQQRADPYAAILPTPISGDDFYGDPGDLGLLAPGEVV
RADRVTPRLPLRRATMQRIMVRSTDTAGNPVPVTAALIEPERPWRGPGSRPVVVRNQAINSLGLKFTPSYRLTHLWYRDN
PPMFPFLSAQNYAVLFPDHEGPRMSYAAGKMAGHAVLDSVRGMLSERPDLAESPIVMHGYSGGAIATAWAAQLQPTYAPE
LRIAGAAAGGTPTDYALLYGSMNRGVGAGLFAAATIGQAREFPELVQIFGDFALYCAIRAKNMPQPPLAAAGLLRFDLDL
LAAIAKPFESELGQHVIAANRPGALTPTMPVLLYHGSRSKAVGDLFIPEEGALALRDAWRANGADVDYWALPGEHVTADM
FAIPWVVNWIRRKLLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Lipase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005152 [H]

Pfam domain/function: PF03583 LIP [H]

EC number: NA

Molecular weight: Translated: 44710; Mature: 44710

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWSTGAFAALGGITAAVATGGTALRSPVVVDRLNDWAARRLTVQQRADPYAAILPTPIS
CCCCCCHHHHHHHHHHHHHCCCHHHCCCCCEEHHHHHHHHHEEHHHCCCCCEEEECCCCC
GDDFYGDPGDLGLLAPGEVVRADRVTPRLPLRRATMQRIMVRSTDTAGNPVPVTAALIEP
CCCCCCCCCCCCEECCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECC
ERPWRGPGSRPVVVRNQAINSLGLKFTPSYRLTHLWYRDNPPMFPFLSAQNYAVLFPDHE
CCCCCCCCCCCEEEECCCHHHCCCEECCCCEEEEEEECCCCCCCEEECCCCEEEEECCCC
GPRMSYAAGKMAGHAVLDSVRGMLSERPDLAESPIVMHGYSGGAIATAWAAQLQPTYAPE
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCC
LRIAGAAAGGTPTDYALLYGSMNRGVGAGLFAAATIGQAREFPELVQIFGDFALYCAIRA
EEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHEEEHEC
KNMPQPPLAAAGLLRFDLDLLAAIAKPFESELGQHVIAANRPGALTPTMPVLLYHGSRSK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEECCCCC
AVGDLFIPEEGALALRDAWRANGADVDYWALPGEHVTADMFAIPWVVNWIRRKLLG
CCCEEECCCCCCCHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRWSTGAFAALGGITAAVATGGTALRSPVVVDRLNDWAARRLTVQQRADPYAAILPTPIS
CCCCCCHHHHHHHHHHHHHCCCHHHCCCCCEEHHHHHHHHHEEHHHCCCCCEEEECCCCC
GDDFYGDPGDLGLLAPGEVVRADRVTPRLPLRRATMQRIMVRSTDTAGNPVPVTAALIEP
CCCCCCCCCCCCEECCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECC
ERPWRGPGSRPVVVRNQAINSLGLKFTPSYRLTHLWYRDNPPMFPFLSAQNYAVLFPDHE
CCCCCCCCCCCEEEECCCHHHCCCEECCCCEEEEEEECCCCCCCEEECCCCEEEEECCCC
GPRMSYAAGKMAGHAVLDSVRGMLSERPDLAESPIVMHGYSGGAIATAWAAQLQPTYAPE
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCC
LRIAGAAAGGTPTDYALLYGSMNRGVGAGLFAAATIGQAREFPELVQIFGDFALYCAIRA
EEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHEEEHEC
KNMPQPPLAAAGLLRFDLDLLAAIAKPFESELGQHVIAANRPGALTPTMPVLLYHGSRSK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEECCCCC
AVGDLFIPEEGALALRDAWRANGADVDYWALPGEHVTADMFAIPWVVNWIRRKLLG
CCCEEECCCCCCCHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]