| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630363
Identifier: 169630363
GI number: 169630363
Start: 3320595
End: 3321845
Strand: Reverse
Name: 169630363
Synonym: MAB_3282c
Alternate gene names: NA
Gene position: 3321845-3320595 (Counterclockwise)
Preceding gene: 169630364
Following gene: 169630360
Centisome position: 65.56
GC content: 67.31
Gene sequence:
>1251_bases ATGCGTTGGTCGACGGGAGCGTTCGCGGCGCTCGGCGGTATCACGGCGGCGGTGGCGACCGGTGGCACCGCGCTGCGCAG CCCCGTGGTGGTTGATCGACTCAACGACTGGGCCGCGCGCCGGCTCACGGTGCAGCAGCGCGCGGACCCGTACGCCGCGA TTCTCCCGACTCCGATCAGCGGTGACGATTTCTACGGTGACCCGGGTGATCTGGGCCTGCTGGCACCCGGGGAGGTGGTC CGCGCGGACCGGGTCACGCCGCGCCTGCCGCTGCGCCGGGCGACCATGCAGCGAATCATGGTGCGCTCCACCGACACCGC CGGCAACCCGGTGCCCGTGACCGCGGCACTGATTGAGCCAGAGCGTCCGTGGCGCGGTCCGGGATCTCGTCCCGTGGTGG TGCGCAACCAGGCGATCAACTCGTTGGGGCTCAAGTTCACGCCGTCTTATCGTTTGACGCACCTGTGGTATCGGGACAAC CCCCCGATGTTCCCGTTCCTGTCGGCACAGAACTACGCGGTGCTGTTCCCGGACCATGAAGGCCCCCGGATGTCCTACGC GGCAGGGAAAATGGCAGGCCATGCGGTGCTGGACTCGGTACGCGGAATGCTTTCGGAAAGGCCGGATCTCGCCGAGTCGC CGATCGTCATGCACGGCTACAGCGGCGGGGCGATCGCCACGGCGTGGGCGGCGCAGCTGCAGCCCACCTACGCTCCGGAG CTGCGGATCGCCGGCGCGGCCGCAGGGGGAACGCCCACCGACTACGCTCTGTTGTACGGCAGCATGAACCGAGGCGTGGG CGCCGGGCTTTTTGCCGCTGCCACCATCGGCCAGGCCCGCGAATTCCCGGAACTGGTACAGATTTTCGGGGATTTCGCGC TCTACTGCGCGATCCGTGCCAAGAACATGCCGCAGCCTCCATTGGCCGCTGCGGGTTTGTTGCGATTCGACCTGGATCTG CTCGCGGCGATCGCCAAGCCGTTCGAGTCGGAGTTGGGACAACACGTTATCGCCGCAAACCGGCCGGGCGCTCTCACCCC GACAATGCCTGTGCTGCTCTACCACGGCTCGCGCAGTAAGGCGGTGGGCGATTTGTTCATCCCGGAAGAGGGTGCCCTGG CGCTGCGCGATGCCTGGCGTGCCAACGGGGCCGATGTCGATTACTGGGCGCTGCCCGGCGAGCACGTCACCGCGGATATG TTCGCGATCCCGTGGGTCGTCAACTGGATCCGGAGAAAGCTACTGGGATGA
Upstream 100 bases:
>100_bases TGTCGGCCTCGCGCGGCTTCTTTGGTTCCAAACCCTTCAGCCGGGCGAATGAGCTGCTGGTCGGTTTGGGCGCACAGCCG GTCGACTGGCGGTTGCCGTA
Downstream 100 bases:
>100_bases GCGTTGGCGCGAAGACGGCGGAACTGGGATGAGCGTTGGCGCGAAGACCGCGGAACTGGGATGAGCGTTGGCGCGAAGAC CGCGGAACTCGGCTAGCTCA
Product: lipase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MRWSTGAFAALGGITAAVATGGTALRSPVVVDRLNDWAARRLTVQQRADPYAAILPTPISGDDFYGDPGDLGLLAPGEVV RADRVTPRLPLRRATMQRIMVRSTDTAGNPVPVTAALIEPERPWRGPGSRPVVVRNQAINSLGLKFTPSYRLTHLWYRDN PPMFPFLSAQNYAVLFPDHEGPRMSYAAGKMAGHAVLDSVRGMLSERPDLAESPIVMHGYSGGAIATAWAAQLQPTYAPE LRIAGAAAGGTPTDYALLYGSMNRGVGAGLFAAATIGQAREFPELVQIFGDFALYCAIRAKNMPQPPLAAAGLLRFDLDL LAAIAKPFESELGQHVIAANRPGALTPTMPVLLYHGSRSKAVGDLFIPEEGALALRDAWRANGADVDYWALPGEHVTADM FAIPWVVNWIRRKLLG
Sequences:
>Translated_416_residues MRWSTGAFAALGGITAAVATGGTALRSPVVVDRLNDWAARRLTVQQRADPYAAILPTPISGDDFYGDPGDLGLLAPGEVV RADRVTPRLPLRRATMQRIMVRSTDTAGNPVPVTAALIEPERPWRGPGSRPVVVRNQAINSLGLKFTPSYRLTHLWYRDN PPMFPFLSAQNYAVLFPDHEGPRMSYAAGKMAGHAVLDSVRGMLSERPDLAESPIVMHGYSGGAIATAWAAQLQPTYAPE LRIAGAAAGGTPTDYALLYGSMNRGVGAGLFAAATIGQAREFPELVQIFGDFALYCAIRAKNMPQPPLAAAGLLRFDLDL LAAIAKPFESELGQHVIAANRPGALTPTMPVLLYHGSRSKAVGDLFIPEEGALALRDAWRANGADVDYWALPGEHVTADM FAIPWVVNWIRRKLLG >Mature_416_residues MRWSTGAFAALGGITAAVATGGTALRSPVVVDRLNDWAARRLTVQQRADPYAAILPTPISGDDFYGDPGDLGLLAPGEVV RADRVTPRLPLRRATMQRIMVRSTDTAGNPVPVTAALIEPERPWRGPGSRPVVVRNQAINSLGLKFTPSYRLTHLWYRDN PPMFPFLSAQNYAVLFPDHEGPRMSYAAGKMAGHAVLDSVRGMLSERPDLAESPIVMHGYSGGAIATAWAAQLQPTYAPE LRIAGAAAGGTPTDYALLYGSMNRGVGAGLFAAATIGQAREFPELVQIFGDFALYCAIRAKNMPQPPLAAAGLLRFDLDL LAAIAKPFESELGQHVIAANRPGALTPTMPVLLYHGSRSKAVGDLFIPEEGALALRDAWRANGADVDYWALPGEHVTADM FAIPWVVNWIRRKLLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. Lipase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005152 [H]
Pfam domain/function: PF03583 LIP [H]
EC number: NA
Molecular weight: Translated: 44710; Mature: 44710
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWSTGAFAALGGITAAVATGGTALRSPVVVDRLNDWAARRLTVQQRADPYAAILPTPIS CCCCCCHHHHHHHHHHHHHCCCHHHCCCCCEEHHHHHHHHHEEHHHCCCCCEEEECCCCC GDDFYGDPGDLGLLAPGEVVRADRVTPRLPLRRATMQRIMVRSTDTAGNPVPVTAALIEP CCCCCCCCCCCCEECCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECC ERPWRGPGSRPVVVRNQAINSLGLKFTPSYRLTHLWYRDNPPMFPFLSAQNYAVLFPDHE CCCCCCCCCCCEEEECCCHHHCCCEECCCCEEEEEEECCCCCCCEEECCCCEEEEECCCC GPRMSYAAGKMAGHAVLDSVRGMLSERPDLAESPIVMHGYSGGAIATAWAAQLQPTYAPE CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCC LRIAGAAAGGTPTDYALLYGSMNRGVGAGLFAAATIGQAREFPELVQIFGDFALYCAIRA EEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHEEEHEC KNMPQPPLAAAGLLRFDLDLLAAIAKPFESELGQHVIAANRPGALTPTMPVLLYHGSRSK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEECCCCC AVGDLFIPEEGALALRDAWRANGADVDYWALPGEHVTADMFAIPWVVNWIRRKLLG CCCEEECCCCCCCHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRWSTGAFAALGGITAAVATGGTALRSPVVVDRLNDWAARRLTVQQRADPYAAILPTPIS CCCCCCHHHHHHHHHHHHHCCCHHHCCCCCEEHHHHHHHHHEEHHHCCCCCEEEECCCCC GDDFYGDPGDLGLLAPGEVVRADRVTPRLPLRRATMQRIMVRSTDTAGNPVPVTAALIEP CCCCCCCCCCCCEECCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECC ERPWRGPGSRPVVVRNQAINSLGLKFTPSYRLTHLWYRDNPPMFPFLSAQNYAVLFPDHE CCCCCCCCCCCEEEECCCHHHCCCEECCCCEEEEEEECCCCCCCEEECCCCEEEEECCCC GPRMSYAAGKMAGHAVLDSVRGMLSERPDLAESPIVMHGYSGGAIATAWAAQLQPTYAPE CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCC LRIAGAAAGGTPTDYALLYGSMNRGVGAGLFAAATIGQAREFPELVQIFGDFALYCAIRA EEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHEEEHEC KNMPQPPLAAAGLLRFDLDLLAAIAKPFESELGQHVIAANRPGALTPTMPVLLYHGSRSK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEECCCCC AVGDLFIPEEGALALRDAWRANGADVDYWALPGEHVTADMFAIPWVVNWIRRKLLG CCCEEECCCCCCCHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]