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The map label for this gene is rpmB [H]

Identifier: 169630361

GI number: 169630361

Start: 3319514

End: 3319711

Strand: Direct

Name: rpmB [H]

Synonym: MAB_3280

Alternate gene names: 169630361

Gene position: 3319514-3319711 (Clockwise)

Preceding gene: 169630357

Following gene: 169630362

Centisome position: 65.51

GC content: 66.16

Gene sequence:

>198_bases
ATGGCTGCCGTCTGCGACGTGTGCGGCAAGGGACCCGGCTTCGGCAAGTCGGTTTCGCACTCGCATCGGCGTACCAACCG
TCGCTGGAACCCGAACATCCAGACGGTTCACGCCGTCACCTCTCCCGGTGGCAACAAGCAGCGCGTCAACGCCTGCACCT
CCTGCATCAAGGCCGGCAAGGTCGTCCGCGGCGCCTGA

Upstream 100 bases:

>100_bases
TTTTGGCGTTCACCGGCCGGTCAAGCTATTCTTGCAGGGTTGTGGGCCACCCTGACTGATCAGGTCGTTGGCCGGAATCG
CGAGTTTGAGGAGTTTCACT

Downstream 100 bases:

>100_bases
TCGCGTCCGGAACCTGCCGTGGCATCTGATTACATCGCCGTCCACAACGGCGTACTGCATATCACCATCGCCACCGCGGC
GGCCGGTACCTCGCTGGACT

Product: 50S ribosomal protein L28

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 64

Protein sequence:

>65_residues
MAAVCDVCGKGPGFGKSVSHSHRRTNRRWNPNIQTVHAVTSPGGNKQRVNACTSCIKAGKVVRGA

Sequences:

>Translated_65_residues
MAAVCDVCGKGPGFGKSVSHSHRRTNRRWNPNIQTVHAVTSPGGNKQRVNACTSCIKAGKVVRGA
>Mature_64_residues
AAVCDVCGKGPGFGKSVSHSHRRTNRRWNPNIQTVHAVTSPGGNKQRVNACTSCIKAGKVVRGA

Specific function: Unknown

COG id: COG0227

COG function: function code J; Ribosomal protein L28

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L28P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001383 [H]

Pfam domain/function: PF00830 Ribosomal_L28 [H]

EC number: NA

Molecular weight: Translated: 6860; Mature: 6729

Theoretical pI: Translated: 11.61; Mature: 11.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAVCDVCGKGPGFGKSVSHSHRRTNRRWNPNIQTVHAVTSPGGNKQRVNACTSCIKAGK
CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCC
VVRGA
CCCCC
>Mature Secondary Structure 
AAVCDVCGKGPGFGKSVSHSHRRTNRRWNPNIQTVHAVTSPGGNKQRVNACTSCIKAGK
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCC
VVRGA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]