| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is recG [H]
Identifier: 169630359
GI number: 169630359
Start: 3315418
End: 3317658
Strand: Reverse
Name: recG [H]
Synonym: MAB_3278c
Alternate gene names: 169630359
Gene position: 3317658-3315418 (Counterclockwise)
Preceding gene: 169630360
Following gene: 169630358
Centisome position: 65.47
GC content: 64.21
Gene sequence:
>2241_bases GTGGCAAAACTTTCCGATCGCCTGGATCATGTATTGGGAAACAAGGCATCCGACGTTCTCGATGCCGAATTCGGTCTGAT TACTGTCGAAGACCTTCTTCACCACTACCCGCGCCGATACAGCACTGACTTCAGCCTGCGCGATGAACAGGACGGCGAAA GCGCCAAGCCTGGGGAACACACCACGCTGGTGGGATTCATCACCTCTGCGGAGCTGAAGAGAATGCGTAACCGCAAGGGG CAGTTCCTCTCCGTCACGCTGGGCAGTGCACCGCATGCCGTACAGGCCACCTTCTTTCACCCGCACAAGGTGAAACGTGA CCTGCAGGTAGGTAATCGGGTGATGCTCTCAGGCGCTGTCGGGGAGTTTCGGGGCAAGCCCCAGTTGACCCACCCCGACT ATTTGGTGCTGGAAACCGCGCTCGGGGAGAGCACCGAAACGCGGGGAAGCACCGCGCTGCGCGGCATCGCCGGGGCCGCT CGGGATGCCTCCACGGCCATCTCGGCCTTCCAGCGCAATGTGTTTCCGATCTACCCGGCAACCAAGAACCTGGAGAGCTG GGATATCTACCGCTGCATCGACCAGGTGCTCACCCAGTTGGATCCGGTGCCCGAGGCGCTGCCGGACGCGGTATTGGCAG AGTACGGTCTGATGTCCCTCGATGAGGCGCTGCGCAAGATCCACATGTCGGAGGACGCCTCCGAACAGAAGCAGGCGCGC CGCCGGCTGGCGTTCGATGAGGCGCTGGGTCTGCAACTGGCGTTGGCCATGCGGCGCGGCAGTGAGATCGGTTCGGCGGG CCCGCCGATGCCACTGGCCCAAGCCGGGCTGCGTGCAGATCTTTTGGGCCAGTTGCCCTTCGACCTTACCGAGGGGCAGC GCCACGTCGTGGCAGAAATCGGGGAAGACCTCGCTGGGGTCAAGCCGATGAACAGGCTGCTTCAGGGCGAGGTCGGCTCC GGTAAGACTGTCGTCGCATTGCTGGCGATGATGCAGGCTATCGATGCCGGGTATCAGTGTGCGCTGCTCGCGCCCACCGA GGTGTTGGCGGTTCAGCATGCCCGATCACTGCGAGCGATGCTCGGATCTTTAGCGACGGCGGGGGAATTGGGTGCACCCG ACGATGCGACCAGCATCGCGCTGCTCACCGGTTCGATGTCGCCTGCGGTGAAGAAGCAGATCAAGGCCGATGTGGCGACC GGCCTAGCGGGCATCGTCATCGGAACTCATGCGCTGCTGCAGGACTCGGTGGACTTTCACAATCTGGGCCTGGTGGTTGT GGACGAGCAGCACCGCTTCGGCGTCGAACAGCGGGATCGCTTGCGGGCCAAGGCTTCGCAAGGCATCGTGCCGCACCTGT TGGTGATGACGGCCACGCCTATCCCGCGTACGGTGGCGCTCACCGTGTTCGGCGATCTGGAGACCTCCACGTTGCGCGAG CTTCCGCGGGGGCGGCAACCCATCACCACGACAGCGGTGTTCACTCGCGAGAAGCCGGGCTGGCTCGCCCGCGGCTGGGA GCGGATCGCCGAGGAGGTCGCCGCGGGCCGGCAGGCCTACGTGGTGGCCTCGCGAATCGACGCCGACGACAAAGACTCCG GTCCGGAAGAGGCGGAGGAGAAGCGTCCGCCGCCGGTCCCGGTCACCGAGTTGTATGAGACCATCCGTGGCTCGCTGCTT CCCGGGCTACGGATCGGTCTGCTGCATGGACGGCTGCCCTCGGAGCAGAAGGACGCCGTGATGACGGCGTTCAACGCGGG CGAGATCGATGTCCTGGTGTGTACGACAGTGATTGAGGTCGGTGTGGACGTGCCCAACGCCACCGTGATGCTCATCATGG ATGCCGATAGGTTCGGAATCAGCCAGTTGCATCAGCTGCGGGGCCGGGTTGGCCGTGGTGGCAATAAGGGGCTGTGCCTT TTGGTCAGCCCTTGCAGCCCAGCGGGCTCGGCCGGGCGCCGGTTGCGTGCGGTGCAGGACACTCTCGATGGGTTCACGCT TGCCGAGCTGGACTTGGAGGAGCGGCGTGAGGGTGATGTCTTGGGGCGTGACCAGTCTGGGCGCGCGGTGAACCTCCGGC TGCTTTCGCTGCTGGATCACCGCGACATGATCGAGACGGCGCGGGAGATGGCGATGCGTGCCTGTGCGGACGATCCTGAG CTGGCGCAGCAACCCGCTTTGGCGGGTATGGCTCGGCGTTTCCTGGTAGCCGATCAGATCGAGTACCTGGACAAGTCGTG A
Upstream 100 bases:
>100_bases CGAGCACACCCGGTCGCATCACGGAGGCGTCGAGGTGATGATCTACCGCACCGGGCAGCACACCGACGTGGTTCACATCG GTGTCGAGTGACGGGGAATA
Downstream 100 bases:
>100_bases GTAATCGCACCATGCTCATCGTCGCCATCGCAGCGGCGATCGCGGTGGTGGTGGCGTATCAGGTGTCGACTCGATACCGC TTGCTACGTGCTAATGCTGT
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 746; Mature: 745
Protein sequence:
>746_residues MAKLSDRLDHVLGNKASDVLDAEFGLITVEDLLHHYPRRYSTDFSLRDEQDGESAKPGEHTTLVGFITSAELKRMRNRKG QFLSVTLGSAPHAVQATFFHPHKVKRDLQVGNRVMLSGAVGEFRGKPQLTHPDYLVLETALGESTETRGSTALRGIAGAA RDASTAISAFQRNVFPIYPATKNLESWDIYRCIDQVLTQLDPVPEALPDAVLAEYGLMSLDEALRKIHMSEDASEQKQAR RRLAFDEALGLQLALAMRRGSEIGSAGPPMPLAQAGLRADLLGQLPFDLTEGQRHVVAEIGEDLAGVKPMNRLLQGEVGS GKTVVALLAMMQAIDAGYQCALLAPTEVLAVQHARSLRAMLGSLATAGELGAPDDATSIALLTGSMSPAVKKQIKADVAT GLAGIVIGTHALLQDSVDFHNLGLVVVDEQHRFGVEQRDRLRAKASQGIVPHLLVMTATPIPRTVALTVFGDLETSTLRE LPRGRQPITTTAVFTREKPGWLARGWERIAEEVAAGRQAYVVASRIDADDKDSGPEEAEEKRPPPVPVTELYETIRGSLL PGLRIGLLHGRLPSEQKDAVMTAFNAGEIDVLVCTTVIEVGVDVPNATVMLIMDADRFGISQLHQLRGRVGRGGNKGLCL LVSPCSPAGSAGRRLRAVQDTLDGFTLAELDLEERREGDVLGRDQSGRAVNLRLLSLLDHRDMIETAREMAMRACADDPE LAQQPALAGMARRFLVADQIEYLDKS
Sequences:
>Translated_746_residues MAKLSDRLDHVLGNKASDVLDAEFGLITVEDLLHHYPRRYSTDFSLRDEQDGESAKPGEHTTLVGFITSAELKRMRNRKG QFLSVTLGSAPHAVQATFFHPHKVKRDLQVGNRVMLSGAVGEFRGKPQLTHPDYLVLETALGESTETRGSTALRGIAGAA RDASTAISAFQRNVFPIYPATKNLESWDIYRCIDQVLTQLDPVPEALPDAVLAEYGLMSLDEALRKIHMSEDASEQKQAR RRLAFDEALGLQLALAMRRGSEIGSAGPPMPLAQAGLRADLLGQLPFDLTEGQRHVVAEIGEDLAGVKPMNRLLQGEVGS GKTVVALLAMMQAIDAGYQCALLAPTEVLAVQHARSLRAMLGSLATAGELGAPDDATSIALLTGSMSPAVKKQIKADVAT GLAGIVIGTHALLQDSVDFHNLGLVVVDEQHRFGVEQRDRLRAKASQGIVPHLLVMTATPIPRTVALTVFGDLETSTLRE LPRGRQPITTTAVFTREKPGWLARGWERIAEEVAAGRQAYVVASRIDADDKDSGPEEAEEKRPPPVPVTELYETIRGSLL PGLRIGLLHGRLPSEQKDAVMTAFNAGEIDVLVCTTVIEVGVDVPNATVMLIMDADRFGISQLHQLRGRVGRGGNKGLCL LVSPCSPAGSAGRRLRAVQDTLDGFTLAELDLEERREGDVLGRDQSGRAVNLRLLSLLDHRDMIETAREMAMRACADDPE LAQQPALAGMARRFLVADQIEYLDKS >Mature_745_residues AKLSDRLDHVLGNKASDVLDAEFGLITVEDLLHHYPRRYSTDFSLRDEQDGESAKPGEHTTLVGFITSAELKRMRNRKGQ FLSVTLGSAPHAVQATFFHPHKVKRDLQVGNRVMLSGAVGEFRGKPQLTHPDYLVLETALGESTETRGSTALRGIAGAAR DASTAISAFQRNVFPIYPATKNLESWDIYRCIDQVLTQLDPVPEALPDAVLAEYGLMSLDEALRKIHMSEDASEQKQARR RLAFDEALGLQLALAMRRGSEIGSAGPPMPLAQAGLRADLLGQLPFDLTEGQRHVVAEIGEDLAGVKPMNRLLQGEVGSG KTVVALLAMMQAIDAGYQCALLAPTEVLAVQHARSLRAMLGSLATAGELGAPDDATSIALLTGSMSPAVKKQIKADVATG LAGIVIGTHALLQDSVDFHNLGLVVVDEQHRFGVEQRDRLRAKASQGIVPHLLVMTATPIPRTVALTVFGDLETSTLREL PRGRQPITTTAVFTREKPGWLARGWERIAEEVAAGRQAYVVASRIDADDKDSGPEEAEEKRPPPVPVTELYETIRGSLLP GLRIGLLHGRLPSEQKDAVMTAFNAGEIDVLVCTTVIEVGVDVPNATVMLIMDADRFGISQLHQLRGRVGRGGNKGLCLL VSPCSPAGSAGRRLRAVQDTLDGFTLAELDLEERREGDVLGRDQSGRAVNLRLLSLLDHRDMIETAREMAMRACADDPEL AQQPALAGMARRFLVADQIEYLDKS
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=714, Percent_Identity=36.8347338935574, Blast_Score=352, Evalue=4e-98, Organism=Escherichia coli, GI1787357, Length=408, Percent_Identity=35.7843137254902, Blast_Score=223, Evalue=3e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 80787; Mature: 80656
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLSDRLDHVLGNKASDVLDAEFGLITVEDLLHHYPRRYSTDFSLRDEQDGESAKPGEH CCCHHHHHHHHHCCCHHHHHHCCCCEEEHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCC TTLVGFITSAELKRMRNRKGQFLSVTLGSAPHAVQATFFHPHKVKRDLQVGNRVMLSGAV EEEEEEHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEECHHHHHHHHHHCCEEEEECCH GEFRGKPQLTHPDYLVLETALGESTETRGSTALRGIAGAARDASTAISAFQRNVFPIYPA HHCCCCCCCCCCCEEEEEHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCEEECCC TKNLESWDIYRCIDQVLTQLDPVPEALPDAVLAEYGLMSLDEALRKIHMSEDASEQKQAR CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH RRLAFDEALGLQLALAMRRGSEIGSAGPPMPLAQAGLRADLLGQLPFDLTEGQRHVVAEI HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHCCCCCCCCCCHHHHHHH GEDLAGVKPMNRLLQGEVGSGKTVVALLAMMQAIDAGYQCALLAPTEVLAVQHARSLRAM HHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHH LGSLATAGELGAPDDATSIALLTGSMSPAVKKQIKADVATGLAGIVIGTHALLQDSVDFH HHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH NLGLVVVDEQHRFGVEQRDRLRAKASQGIVPHLLVMTATPIPRTVALTVFGDLETSTLRE HCCEEEECCHHHCCCCHHHHHHHHHHCCCCCEEHHHCCCCCCCEEEEEEECCCCHHHHHH LPRGRQPITTTAVFTREKPGWLARGWERIAEEVAAGRQAYVVASRIDADDKDSGPEEAEE CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHH KRPPPVPVTELYETIRGSLLPGLRIGLLHGRLPSEQKDAVMTAFNAGEIDVLVCTTVIEV CCCCCCCHHHHHHHHHHHCCCCHHEEHHHCCCCCCHHCCEEEEECCCCEEEHHHHHHHHH GVDVPNATVMLIMDADRFGISQLHQLRGRVGRGGNKGLCLLVSPCSPAGSAGRRLRAVQD CCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHH TLDGFTLAELDLEERREGDVLGRDQSGRAVNLRLLSLLDHRDMIETAREMAMRACADDPE HHCCCEEEECCHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LAQQPALAGMARRFLVADQIEYLDKS HHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AKLSDRLDHVLGNKASDVLDAEFGLITVEDLLHHYPRRYSTDFSLRDEQDGESAKPGEH CCHHHHHHHHHCCCHHHHHHCCCCEEEHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCC TTLVGFITSAELKRMRNRKGQFLSVTLGSAPHAVQATFFHPHKVKRDLQVGNRVMLSGAV EEEEEEHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEECHHHHHHHHHHCCEEEEECCH GEFRGKPQLTHPDYLVLETALGESTETRGSTALRGIAGAARDASTAISAFQRNVFPIYPA HHCCCCCCCCCCCEEEEEHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCEEECCC TKNLESWDIYRCIDQVLTQLDPVPEALPDAVLAEYGLMSLDEALRKIHMSEDASEQKQAR CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH RRLAFDEALGLQLALAMRRGSEIGSAGPPMPLAQAGLRADLLGQLPFDLTEGQRHVVAEI HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHCCCCCCCCCCHHHHHHH GEDLAGVKPMNRLLQGEVGSGKTVVALLAMMQAIDAGYQCALLAPTEVLAVQHARSLRAM HHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHH LGSLATAGELGAPDDATSIALLTGSMSPAVKKQIKADVATGLAGIVIGTHALLQDSVDFH HHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH NLGLVVVDEQHRFGVEQRDRLRAKASQGIVPHLLVMTATPIPRTVALTVFGDLETSTLRE HCCEEEECCHHHCCCCHHHHHHHHHHCCCCCEEHHHCCCCCCCEEEEEEECCCCHHHHHH LPRGRQPITTTAVFTREKPGWLARGWERIAEEVAAGRQAYVVASRIDADDKDSGPEEAEE CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHH KRPPPVPVTELYETIRGSLLPGLRIGLLHGRLPSEQKDAVMTAFNAGEIDVLVCTTVIEV CCCCCCCHHHHHHHHHHHCCCCHHEEHHHCCCCCCHHCCEEEEECCCCEEEHHHHHHHHH GVDVPNATVMLIMDADRFGISQLHQLRGRVGRGGNKGLCLLVSPCSPAGSAGRRLRAVQD CCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHH TLDGFTLAELDLEERREGDVLGRDQSGRAVNLRLLSLLDHRDMIETAREMAMRACADDPE HHCCCEEEECCHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LAQQPALAGMARRFLVADQIEYLDKS HHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]