| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630358
Identifier: 169630358
GI number: 169630358
Start: 3314711
End: 3315421
Strand: Reverse
Name: 169630358
Synonym: MAB_3277c
Alternate gene names: NA
Gene position: 3315421-3314711 (Counterclockwise)
Preceding gene: 169630359
Following gene: 169630354
Centisome position: 65.43
GC content: 61.04
Gene sequence:
>711_bases GTGAGTAATCGCACCATGCTCATCGTCGCCATCGCAGCGGCGATCGCGGTGGTGGTGGCGTATCAGGTGTCGACTCGATA CCGCTTGCTACGTGCTAATGCTGTTGCTGGGCAGACGAACATTCCCACTCTTGCCCCTGGGCAAGACCCGCTTGCCGGAG TGATCGTGGTGCCCAAGCGGATACGGGGCAGCGACTATCAGCGCAGTGAGTTCGGCGATGCCTGGTCCGACGACACGGAT GCGCCCAGCGGTCGCAACGGCTGCGACACGCGCAACGACATCCTGAATCGCGATTTGACCGACAAGAGTTTTGTGTACAC GCGCAGATGCCCGAGCGCGGTGGGTGCCGGCCTCCTTCATGATCCTTACACCGGAGTGCAGATTGCGTTTACTCGTGGAC CGAAGAGCGGGGAGTCGGTTCAGATCGACCACATTGTGCCGTTGGCCTATGCATGGGACATGGGTGCGCGCGAATGGCAG CCGGCGACGCGCTGGCGTTTTGCGAACGATCCCGCCAATCTCATCGCGGTGCAAGGCCAGGTGAACAAGGACAAGGGCGA TCAGGCGCCCGGGAGCTGGATGCCGCCGAACAAGGAATTCTGGTGTCAGTACTCCATGCAGTTCGCGGAAGTGGTTCGCG GGTATCATCTTTCGGTGGACGAGCAGTCAGCCAACGCCATTAGGAAGGCGGCGCAGACTTGTCCGCACTGA
Upstream 100 bases:
>100_bases GTGCCTGTGCGGACGATCCTGAGCTGGCGCAGCAACCCGCTTTGGCGGGTATGGCTCGGCGTTTCCTGGTAGCCGATCAG ATCGAGTACCTGGACAAGTC
Downstream 100 bases:
>100_bases CGGTGACGGAGCCAGTTCGTAGCGGCAGATTCCTGGCCCGGCGGCTGGCAATGTATTCCGGACTGTAGAGAGACTCTCGG TCGTACAGTCCGAGCTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein; Extracellular Deoxyribonuclease; S-Layer Domain-Containing Protein; Excalibur Domain-Containing Protein; 3-Oxoacyl-[Acyl-Carrier-Protein] Synthase III; S-Layer Domain Protein; Cation Transport ATPase; Excalibur Domain Protein; Conserved Membrane Protein
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MSNRTMLIVAIAAAIAVVVAYQVSTRYRLLRANAVAGQTNIPTLAPGQDPLAGVIVVPKRIRGSDYQRSEFGDAWSDDTD APSGRNGCDTRNDILNRDLTDKSFVYTRRCPSAVGAGLLHDPYTGVQIAFTRGPKSGESVQIDHIVPLAYAWDMGAREWQ PATRWRFANDPANLIAVQGQVNKDKGDQAPGSWMPPNKEFWCQYSMQFAEVVRGYHLSVDEQSANAIRKAAQTCPH
Sequences:
>Translated_236_residues MSNRTMLIVAIAAAIAVVVAYQVSTRYRLLRANAVAGQTNIPTLAPGQDPLAGVIVVPKRIRGSDYQRSEFGDAWSDDTD APSGRNGCDTRNDILNRDLTDKSFVYTRRCPSAVGAGLLHDPYTGVQIAFTRGPKSGESVQIDHIVPLAYAWDMGAREWQ PATRWRFANDPANLIAVQGQVNKDKGDQAPGSWMPPNKEFWCQYSMQFAEVVRGYHLSVDEQSANAIRKAAQTCPH >Mature_235_residues SNRTMLIVAIAAAIAVVVAYQVSTRYRLLRANAVAGQTNIPTLAPGQDPLAGVIVVPKRIRGSDYQRSEFGDAWSDDTDA PSGRNGCDTRNDILNRDLTDKSFVYTRRCPSAVGAGLLHDPYTGVQIAFTRGPKSGESVQIDHIVPLAYAWDMGAREWQP ATRWRFANDPANLIAVQGQVNKDKGDQAPGSWMPPNKEFWCQYSMQFAEVVRGYHLSVDEQSANAIRKAAQTCPH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25949; Mature: 25818
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNRTMLIVAIAAAIAVVVAYQVSTRYRLLRANAVAGQTNIPTLAPGQDPLAGVIVVPKR CCCCEEEHHHHHHHHHHHHHHHHHHHEEEEEHHHCCCCCCCCCCCCCCCCCEEEEEECCC IRGSDYQRSEFGDAWSDDTDAPSGRNGCDTRNDILNRDLTDKSFVYTRRCPSAVGAGLLH CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEECCCCHHHCCCCCC DPYTGVQIAFTRGPKSGESVQIDHIVPLAYAWDMGAREWQPATRWRFANDPANLIAVQGQ CCCCCEEEEEECCCCCCCCEEEEEEEEEHEEECCCCCCCCCHHCCEECCCCCEEEEEECC VNKDKGDQAPGSWMPPNKEFWCQYSMQFAEVVRGYHLSVDEQSANAIRKAAQTCPH CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SNRTMLIVAIAAAIAVVVAYQVSTRYRLLRANAVAGQTNIPTLAPGQDPLAGVIVVPKR CCCEEEHHHHHHHHHHHHHHHHHHHEEEEEHHHCCCCCCCCCCCCCCCCCEEEEEECCC IRGSDYQRSEFGDAWSDDTDAPSGRNGCDTRNDILNRDLTDKSFVYTRRCPSAVGAGLLH CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEECCCCHHHCCCCCC DPYTGVQIAFTRGPKSGESVQIDHIVPLAYAWDMGAREWQPATRWRFANDPANLIAVQGQ CCCCCEEEEEECCCCCCCCEEEEEEEEEHEEECCCCCCCCCHHCCEECCCCCEEEEEECC VNKDKGDQAPGSWMPPNKEFWCQYSMQFAEVVRGYHLSVDEQSANAIRKAAQTCPH CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA