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The map label for this gene is ydiO [H]

Identifier: 169630204

GI number: 169630204

Start: 3162460

End: 3163701

Strand: Direct

Name: ydiO [H]

Synonym: MAB_3122

Alternate gene names: 169630204

Gene position: 3162460-3163701 (Clockwise)

Preceding gene: 169630202

Following gene: 169630205

Centisome position: 62.41

GC content: 65.3

Gene sequence:

>1242_bases
ATGCCAGTGACGTCATCGGAGCCGTCTAGCGCCGGGTCCAACGCCCTTCATACCAGCGGTTCATCGCAACGCGACCGTGT
CGCCGCTGCCGCCCACGAGGTGCTCGCCAAACATCCCCCCGCGACGACGCCGGTGACCGACCTATTGGGCGCCGTCTACG
ACGCGGGCCTGGCCTGGGTACATTTCCCGGTCGGCCTGGGTGGCCTGGACGCGCCGCCGGCGCTGCAGGCCGTTTCCGAC
ACCATCCTGCGCGCGGCCGGTGTGCCAGACCCCTTGTTTGTCAACGTGATCGGGTATGGCATGGCAGCGCCGACGGTACT
AGCGCATGGACAACCGGAATTGATCCGGCGGATCCTGCGTCCCCTGTTCACCGGTGAAGAGCTGTGGTGTCAGCTCTTCA
GCGAGCCGGGTGCCGGCTCCGATTTGGCAGGCCTGGCCACCCGCGCGGTACGCGACGGCGATGAGTGGGTGATCAACGGT
CAGAAGGTGTGGACCTCGGGGGCGCATCAGGCGCGCTGGGCCTTGTTGGTGGCCCGCAGCAATCCCGACGTGGCCAAGCA
TCGGGGCCTGACCTACTTCGTCGTCGACATGACCGATCCCGGCGTCGAGGTCCGTCCCCTGCGCCAGATGACCGGCGACG
CCGAGTTCAACGAGGTCTATCTCACCGATGTCCGCATCCCGGACGCACACCGCCTGGGCAACGAGGGCGATGGCTGGCGG
GTGTCGATGACCACGTTGATGAACGAGCGCAGCGCACTGGGTGGCGCCTTCGATCACGGCCGCGGCGGTGGCTCGATCGG
CAATGCCCTCAATCTGTGGAAGCAGCGCCCCGATCTGCACACTCCCGAGCTGCGGGCCAAGCTGACGAATCTTTTCGTAC
GCTCGGAAGGCAACCGCTACGGCACACAGATGAGGATCGCCGCCCAGGGCGATGCGCCTATGGGTCCCGAAGGATCTATC
GGCAAGCTGATGGGCGCGGAACTCAACCAGCAGATCTACGACTTCTGTGTTGAACTGCTGGGCATCGAGGCGACCCTGTA
CGCCTCCTATGACATGCGCCGGGTGGTGGAAGACGACCGGCGTGCCGACACCATGTGGGCCTTCCTGCGATCCAAGGCCA
ACACCATCGAAGGCGGTACCTCCGACGTGATGCGCAACATCATCGGAGAACGCGTACTCGGATTGCCCGGCGATATTCGG
GTCGACACCGACAAAGCCTGGAAGGACGTGCCCCGCGGATGA

Upstream 100 bases:

>100_bases
CGGTGATGTTCCTGCACATATCTACGACAGTAGAAACAGATTCCGGAAGACGCCATGCCCCACCCACCGGTTAGTTCACA
TGCGCGTGTATACGTAAGTC

Downstream 100 bases:

>100_bases
GCGCCAGCGAAGACCATCAAACCCGGATGAGCGCCAGCGAAGACAATCAAACCCGGATGAGCGCCAGCGAAGACAATCAG
GCCCAGATCAATGAATTCGA

Product: putative acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MPVTSSEPSSAGSNALHTSGSSQRDRVAAAAHEVLAKHPPATTPVTDLLGAVYDAGLAWVHFPVGLGGLDAPPALQAVSD
TILRAAGVPDPLFVNVIGYGMAAPTVLAHGQPELIRRILRPLFTGEELWCQLFSEPGAGSDLAGLATRAVRDGDEWVING
QKVWTSGAHQARWALLVARSNPDVAKHRGLTYFVVDMTDPGVEVRPLRQMTGDAEFNEVYLTDVRIPDAHRLGNEGDGWR
VSMTTLMNERSALGGAFDHGRGGGSIGNALNLWKQRPDLHTPELRAKLTNLFVRSEGNRYGTQMRIAAQGDAPMGPEGSI
GKLMGAELNQQIYDFCVELLGIEATLYASYDMRRVVEDDRRADTMWAFLRSKANTIEGGTSDVMRNIIGERVLGLPGDIR
VDTDKAWKDVPRG

Sequences:

>Translated_413_residues
MPVTSSEPSSAGSNALHTSGSSQRDRVAAAAHEVLAKHPPATTPVTDLLGAVYDAGLAWVHFPVGLGGLDAPPALQAVSD
TILRAAGVPDPLFVNVIGYGMAAPTVLAHGQPELIRRILRPLFTGEELWCQLFSEPGAGSDLAGLATRAVRDGDEWVING
QKVWTSGAHQARWALLVARSNPDVAKHRGLTYFVVDMTDPGVEVRPLRQMTGDAEFNEVYLTDVRIPDAHRLGNEGDGWR
VSMTTLMNERSALGGAFDHGRGGGSIGNALNLWKQRPDLHTPELRAKLTNLFVRSEGNRYGTQMRIAAQGDAPMGPEGSI
GKLMGAELNQQIYDFCVELLGIEATLYASYDMRRVVEDDRRADTMWAFLRSKANTIEGGTSDVMRNIIGERVLGLPGDIR
VDTDKAWKDVPRG
>Mature_412_residues
PVTSSEPSSAGSNALHTSGSSQRDRVAAAAHEVLAKHPPATTPVTDLLGAVYDAGLAWVHFPVGLGGLDAPPALQAVSDT
ILRAAGVPDPLFVNVIGYGMAAPTVLAHGQPELIRRILRPLFTGEELWCQLFSEPGAGSDLAGLATRAVRDGDEWVINGQ
KVWTSGAHQARWALLVARSNPDVAKHRGLTYFVVDMTDPGVEVRPLRQMTGDAEFNEVYLTDVRIPDAHRLGNEGDGWRV
SMTTLMNERSALGGAFDHGRGGGSIGNALNLWKQRPDLHTPELRAKLTNLFVRSEGNRYGTQMRIAAQGDAPMGPEGSIG
KLMGAELNQQIYDFCVELLGIEATLYASYDMRRVVEDDRRADTMWAFLRSKANTIEGGTSDVMRNIIGERVLGLPGDIRV
DTDKAWKDVPRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI187960098, Length=232, Percent_Identity=30.1724137931034, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI4557231, Length=232, Percent_Identity=30.1724137931034, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI4501859, Length=355, Percent_Identity=25.6338028169014, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI4501857, Length=317, Percent_Identity=25.2365930599369, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI4557233, Length=245, Percent_Identity=26.530612244898, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI4557235, Length=251, Percent_Identity=26.6932270916335, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI38505218, Length=143, Percent_Identity=31.4685314685315, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI76496475, Length=251, Percent_Identity=26.6932270916335, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI7656849, Length=150, Percent_Identity=29.3333333333333, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI226958414, Length=142, Percent_Identity=31.6901408450704, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI226958412, Length=198, Percent_Identity=28.2828282828283, Blast_Score=70, Evalue=3e-12,
Organism=Escherichia coli, GI87081958, Length=356, Percent_Identity=24.438202247191, Blast_Score=92, Evalue=8e-20,
Organism=Escherichia coli, GI1786223, Length=206, Percent_Identity=27.6699029126214, Blast_Score=72, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17534899, Length=201, Percent_Identity=30.8457711442786, Blast_Score=94, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI17570075, Length=365, Percent_Identity=24.6575342465753, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17569725, Length=186, Percent_Identity=32.258064516129, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17505929, Length=211, Percent_Identity=28.436018957346, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17508101, Length=371, Percent_Identity=25.0673854447439, Blast_Score=86, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17551932, Length=211, Percent_Identity=27.9620853080569, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17506239, Length=237, Percent_Identity=26.5822784810127, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17538396, Length=304, Percent_Identity=25, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI32563615, Length=224, Percent_Identity=26.3392857142857, Blast_Score=75, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI71990804, Length=242, Percent_Identity=23.5537190082645, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI71982178, Length=170, Percent_Identity=28.8235294117647, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI71985184, Length=215, Percent_Identity=27.4418604651163, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71985192, Length=215, Percent_Identity=27.4418604651163, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24660351, Length=207, Percent_Identity=30.9178743961353, Blast_Score=99, Evalue=6e-21,
Organism=Drosophila melanogaster, GI21356377, Length=245, Percent_Identity=26.9387755102041, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24646207, Length=304, Percent_Identity=27.6315789473684, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI281363737, Length=325, Percent_Identity=25.8461538461538, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24666513, Length=303, Percent_Identity=25.7425742574257, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21355753, Length=151, Percent_Identity=33.7748344370861, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44636; Mature: 44505

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVTSSEPSSAGSNALHTSGSSQRDRVAAAAHEVLAKHPPATTPVTDLLGAVYDAGLAWV
CCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEE
HFPVGLGGLDAPPALQAVSDTILRAAGVPDPLFVNVIGYGMAAPTVLAHGQPELIRRILR
EECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHCCHHEECCCHHHHHHHHH
PLFTGEELWCQLFSEPGAGSDLAGLATRAVRDGDEWVINGQKVWTSGAHQARWALLVARS
HHCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEECCCEEECCCCCCCEEEEEEECC
NPDVAKHRGLTYFVVDMTDPGVEVRPLRQMTGDAEFNEVYLTDVRIPDAHRLGNEGDGWR
CCCHHHHCCCEEEEEECCCCCCCEEHHHHHCCCCCCCEEEEEEEECCCHHHCCCCCCCEE
VSMTTLMNERSALGGAFDHGRGGGSIGNALNLWKQRPDLHTPELRAKLTNLFVRSEGNRY
EEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC
GTQMRIAAQGDAPMGPEGSIGKLMGAELNQQIYDFCVELLGIEATLYASYDMRRVVEDDR
CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHH
RADTMWAFLRSKANTIEGGTSDVMRNIIGERVLGLPGDIRVDTDKAWKDVPRG
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCHHHHCCCCC
>Mature Secondary Structure 
PVTSSEPSSAGSNALHTSGSSQRDRVAAAAHEVLAKHPPATTPVTDLLGAVYDAGLAWV
CCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEE
HFPVGLGGLDAPPALQAVSDTILRAAGVPDPLFVNVIGYGMAAPTVLAHGQPELIRRILR
EECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHCCHHEECCCHHHHHHHHH
PLFTGEELWCQLFSEPGAGSDLAGLATRAVRDGDEWVINGQKVWTSGAHQARWALLVARS
HHCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEECCCEEECCCCCCCEEEEEEECC
NPDVAKHRGLTYFVVDMTDPGVEVRPLRQMTGDAEFNEVYLTDVRIPDAHRLGNEGDGWR
CCCHHHHCCCEEEEEECCCCCCCEEHHHHHCCCCCCCEEEEEEEECCCHHHCCCCCCCEE
VSMTTLMNERSALGGAFDHGRGGGSIGNALNLWKQRPDLHTPELRAKLTNLFVRSEGNRY
EEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC
GTQMRIAAQGDAPMGPEGSIGKLMGAELNQQIYDFCVELLGIEATLYASYDMRRVVEDDR
CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHH
RADTMWAFLRSKANTIEGGTSDVMRNIIGERVLGLPGDIRVDTDKAWKDVPRG
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]