| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630116
Identifier: 169630116
GI number: 169630116
Start: 3085514
End: 3086506
Strand: Direct
Name: 169630116
Synonym: MAB_3033
Alternate gene names: NA
Gene position: 3085514-3086506 (Clockwise)
Preceding gene: 169630115
Following gene: 169630117
Centisome position: 60.89
GC content: 64.95
Gene sequence:
>993_bases ATGACCAGCAATGAGGGTGTAGAGCCACAGCCGTACAAACCGGATCAGAGCGGCATGTACGAGCTGGAATTTCCGGGCCC GCAGCTGGCATCTGCCGACGGACGCGGCCCGGTTCTCGTGCACGCGCTACAGGGTTTCTCCGACTCCGGCCATGCCGTGA AACTGGCCGCCGCGCATCTACGCCAGACGCTTGAGAGCGAGCTGGTGGCGTCGTTCGCGATCGACGATCTGCTCGACTAC CGGTCGCGCCGGCCGGTGATGACATTCAAGAGCGATCACTTCACCGAGTACGCCACCCCCGAGCTGAATCTGTATGCCCT CAAGGACACCAAGGGCACACCGTTCTTGTTGCTGGCCGGGCTCGAACCGGATCTGAAATGGGAGCGATTCGTCAACGCGA TCCGGCTGCTCGCCGAGCAGCTCGGCGTGCGTAAGACGATCGGATTGGGCGCCATTCCGATGGCGGTTCCGCATACCCGC CCGATCACGCTGACCGCGCACGGCAACGATCGCAAGACGCTCGACGAGCACCCTGGCTGGATCGATGAGGTTCAGGTGCC GGGCAGCGCGTCCAATCTGCTGGAGTTCCGCCTGGCCCAGCACGGGCACGACGTGGTCGGCTTCGCCGTGCACGTTCCGC ATTACCTGGCGCAGACCGACTACCCGGAGGCCTCGCAGCGCCTGCTGGAAGAGGTCGCCAGGACCGGCGATCTGGATCTG CCGCTACAGGAGCTCAGCGAGGCGGCCGCCAAGGTGCGCAACCAGATCAACGAGCAGGTCGAGGGCAGCGAGGAAGTGGC GCAGGTGGTCCAGGCCCTCGAGCGCCAGTACGACGCCTTTGTCGCGGCCCAGGAGAATCGTTCGTTGCTGGCACGGGACG AAGAGCTGCCCAGCGGTGACGAGCTGGCCGGAGAGTTCGAGCGATTCCTCGCCGAACAGGCCAAGTTCGGCGACGATCCC TCGGGTCCGTCACCGGAAGGCCCCATTCTCTAG
Upstream 100 bases:
>100_bases AATTCGCATCCCGCCCGGGCCGTTGACCCGATAGGTACATTCGCCGTTTGCCTGCCGGTAAGGGACACTGGTAGGACGAG GACGCGAAGGGAGGCGAGCC
Downstream 100 bases:
>100_bases CCGGGTTGTGCGCTCGCCGCGCCAAATTTGCGGCGACGGGTCAAAATACTTCACATGAATCCTCCACCGCGGCTCCTGCG TCCGGTGCCGGATACCGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MTSNEGVEPQPYKPDQSGMYELEFPGPQLASADGRGPVLVHALQGFSDSGHAVKLAAAHLRQTLESELVASFAIDDLLDY RSRRPVMTFKSDHFTEYATPELNLYALKDTKGTPFLLLAGLEPDLKWERFVNAIRLLAEQLGVRKTIGLGAIPMAVPHTR PITLTAHGNDRKTLDEHPGWIDEVQVPGSASNLLEFRLAQHGHDVVGFAVHVPHYLAQTDYPEASQRLLEEVARTGDLDL PLQELSEAAAKVRNQINEQVEGSEEVAQVVQALERQYDAFVAAQENRSLLARDEELPSGDELAGEFERFLAEQAKFGDDP SGPSPEGPIL
Sequences:
>Translated_330_residues MTSNEGVEPQPYKPDQSGMYELEFPGPQLASADGRGPVLVHALQGFSDSGHAVKLAAAHLRQTLESELVASFAIDDLLDY RSRRPVMTFKSDHFTEYATPELNLYALKDTKGTPFLLLAGLEPDLKWERFVNAIRLLAEQLGVRKTIGLGAIPMAVPHTR PITLTAHGNDRKTLDEHPGWIDEVQVPGSASNLLEFRLAQHGHDVVGFAVHVPHYLAQTDYPEASQRLLEEVARTGDLDL PLQELSEAAAKVRNQINEQVEGSEEVAQVVQALERQYDAFVAAQENRSLLARDEELPSGDELAGEFERFLAEQAKFGDDP SGPSPEGPIL >Mature_329_residues TSNEGVEPQPYKPDQSGMYELEFPGPQLASADGRGPVLVHALQGFSDSGHAVKLAAAHLRQTLESELVASFAIDDLLDYR SRRPVMTFKSDHFTEYATPELNLYALKDTKGTPFLLLAGLEPDLKWERFVNAIRLLAEQLGVRKTIGLGAIPMAVPHTRP ITLTAHGNDRKTLDEHPGWIDEVQVPGSASNLLEFRLAQHGHDVVGFAVHVPHYLAQTDYPEASQRLLEEVARTGDLDLP LQELSEAAAKVRNQINEQVEGSEEVAQVVQALERQYDAFVAAQENRSLLARDEELPSGDELAGEFERFLAEQAKFGDDPS GPSPEGPIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36303; Mature: 36172
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSNEGVEPQPYKPDQSGMYELEFPGPQLASADGRGPVLVHALQGFSDSGHAVKLAAAHL CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEHHHHHHH RQTLESELVASFAIDDLLDYRSRRPVMTFKSDHFTEYATPELNLYALKDTKGTPFLLLAG HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEEC LEPDLKWERFVNAIRLLAEQLGVRKTIGLGAIPMAVPHTRPITLTAHGNDRKTLDEHPGW CCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHCCCCC IDEVQVPGSASNLLEFRLAQHGHDVVGFAVHVPHYLAQTDYPEASQRLLEEVARTGDLDL HHEEECCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC PLQELSEAAAKVRNQINEQVEGSEEVAQVVQALERQYDAFVAAQENRSLLARDEELPSGD CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCH ELAGEFERFLAEQAKFGDDPSGPSPEGPIL HHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TSNEGVEPQPYKPDQSGMYELEFPGPQLASADGRGPVLVHALQGFSDSGHAVKLAAAHL CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEHHHHHHH RQTLESELVASFAIDDLLDYRSRRPVMTFKSDHFTEYATPELNLYALKDTKGTPFLLLAG HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEEC LEPDLKWERFVNAIRLLAEQLGVRKTIGLGAIPMAVPHTRPITLTAHGNDRKTLDEHPGW CCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHCCCCC IDEVQVPGSASNLLEFRLAQHGHDVVGFAVHVPHYLAQTDYPEASQRLLEEVARTGDLDL HHEEECCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC PLQELSEAAAKVRNQINEQVEGSEEVAQVVQALERQYDAFVAAQENRSLLARDEELPSGD CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCH ELAGEFERFLAEQAKFGDDPSGPSPEGPIL HHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA