| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169630061
Identifier: 169630061
GI number: 169630061
Start: 3037603
End: 3038967
Strand: Direct
Name: 169630061
Synonym: MAB_2978
Alternate gene names: NA
Gene position: 3037603-3038967 (Clockwise)
Preceding gene: 169630060
Following gene: 169630062
Centisome position: 59.95
GC content: 61.54
Gene sequence:
>1365_bases GTGGTGTCAGTCGATGCATTAGTCACAGGCTTCAAGAACTCTTTGGCACCGAAAACAGCGCCGCCGTCGGTCGCGACCAT CCTGCGGTCGGTGCTGTGGCCCGTGGCCATCATGGCGGTGATTCACCGCAGCTATGTGCTGGGCACCAACGGCTACATCA CCGACGACTTCGGGCCCGTCTATCGCGCCGTCATCGCCTTCAAACTCCACCAGCCTGTCTACGGCGAGAACTTCAACTAC GTCGACCCGCATTACATCTATCCACCGGGCGGCACGTTACTGTTGGCGCCCTTCGGATATCTGCCGGTGGACGCGTCGCG GTACTGGTTCATCACCATCAACACCATCGCGATCGTGATCGCGGCCTACTTCCTGCTGCGGCTGTTCAACTTCACGCTGG CCTCGGTGGCCGCACCCGCGCTGCTGCTGGCCATGTTCTGCACCGAGAGTGTCACCAACACACTGGTTTTCACCAACATC AACGGTGTGGTGCTGCTGCTGGAGGTGCTGTTCTTCCGCTGGTTGCTGCACGGCACCAAGAAATCCGAATGGTTGGCCGG GGTTGCCATCGGCCTCACGCTGGTGATCAAACCGCTGCTGGCTCCCCTGCTGTTGCTGCCGCTGTTGAATCGCCAATGGC GTGTGTTCGCCGCCGCGTTCGGCATTCCCGCCTTCTTCAATCTGGTGGCCCTGTACGGCCCCCGCAAGGTCAGGATCGTC GACGGCTGGGACTATCTGCGCCGCACCGTGAAGTACCTGGGCGAAACCCGCGATTACTTCAACAGCTCCATCGCCGGCAA CGGCCTGTACTACGGGCTGCCCGAGCCGTTGATCGCCTTTTTGCGGATTGCTTTCCTGGCGATCGCCCTGGTCAGCGTGT GGCTGCTGTACAAGTACTACCGTCGGCGCGATCCCAGGTTCTGGGCACTGACCACCGGCGGTGTGCTGTTGACCGCGTCT TTCCTGCTGCTGGGCCTGGGCCAGGGGTACTACTCGATGGCGCTGTTCCCGTTCGTCATGACGATCGTGCTGCCCAATTC GGTGCTGAGGAACTGGCCCGCCTGGCTGGCGGTCTACGGGTTCTTTTCCATGGATCGCTGGCTGCTTGGCCATTGGCCCA CCACGGGCCGCGCGCTGGAATACCTCAAGATCACCTACGGGTGGTGCCTGCTGCTGATCGTCGTGATGATGGTGCTGGTG CTTCGGTACCGGGATGCCCGGGCCGCTGGCACACTGGATCAAGGACTAGATCCGGAGTGGATGAGGGCCCAGACAGGCAC TAAGGAGTCAGCAACCGATGACGACATCGAACGACCCGAAGGTGAATCTGACCGACGAGCAGTGGCGGGAGCGACTGACT CCTGA
Upstream 100 bases:
>100_bases GGCGTACCTGGGTGACGGCAAGCTCCCGGACACCGACACGTTCTGCCCGGCCTAGCCGTACTTGCGGGAGCCTTTCGGGG CGCTCAGGTACGGTGCCTGC
Downstream 100 bases:
>100_bases CGAGTTCGCGGTGCTGCGCCGTGCGGGCACCGAACGACCGTTCGTCGGCGAGTACACCGACACCAAGACCGAGGGCGTGT ACAACTGCCGGGCATGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Arabinofuranosyl Transferase C; Transmembrane Protein; Conserved Membrane Protein; Arabinosyltransferase AftC
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MVSVDALVTGFKNSLAPKTAPPSVATILRSVLWPVAIMAVIHRSYVLGTNGYITDDFGPVYRAVIAFKLHQPVYGENFNY VDPHYIYPPGGTLLLAPFGYLPVDASRYWFITINTIAIVIAAYFLLRLFNFTLASVAAPALLLAMFCTESVTNTLVFTNI NGVVLLLEVLFFRWLLHGTKKSEWLAGVAIGLTLVIKPLLAPLLLLPLLNRQWRVFAAAFGIPAFFNLVALYGPRKVRIV DGWDYLRRTVKYLGETRDYFNSSIAGNGLYYGLPEPLIAFLRIAFLAIALVSVWLLYKYYRRRDPRFWALTTGGVLLTAS FLLLGLGQGYYSMALFPFVMTIVLPNSVLRNWPAWLAVYGFFSMDRWLLGHWPTTGRALEYLKITYGWCLLLIVVMMVLV LRYRDARAAGTLDQGLDPEWMRAQTGTKESATDDDIERPEGESDRRAVAGATDS
Sequences:
>Translated_454_residues MVSVDALVTGFKNSLAPKTAPPSVATILRSVLWPVAIMAVIHRSYVLGTNGYITDDFGPVYRAVIAFKLHQPVYGENFNY VDPHYIYPPGGTLLLAPFGYLPVDASRYWFITINTIAIVIAAYFLLRLFNFTLASVAAPALLLAMFCTESVTNTLVFTNI NGVVLLLEVLFFRWLLHGTKKSEWLAGVAIGLTLVIKPLLAPLLLLPLLNRQWRVFAAAFGIPAFFNLVALYGPRKVRIV DGWDYLRRTVKYLGETRDYFNSSIAGNGLYYGLPEPLIAFLRIAFLAIALVSVWLLYKYYRRRDPRFWALTTGGVLLTAS FLLLGLGQGYYSMALFPFVMTIVLPNSVLRNWPAWLAVYGFFSMDRWLLGHWPTTGRALEYLKITYGWCLLLIVVMMVLV LRYRDARAAGTLDQGLDPEWMRAQTGTKESATDDDIERPEGESDRRAVAGATDS >Mature_454_residues MVSVDALVTGFKNSLAPKTAPPSVATILRSVLWPVAIMAVIHRSYVLGTNGYITDDFGPVYRAVIAFKLHQPVYGENFNY VDPHYIYPPGGTLLLAPFGYLPVDASRYWFITINTIAIVIAAYFLLRLFNFTLASVAAPALLLAMFCTESVTNTLVFTNI NGVVLLLEVLFFRWLLHGTKKSEWLAGVAIGLTLVIKPLLAPLLLLPLLNRQWRVFAAAFGIPAFFNLVALYGPRKVRIV DGWDYLRRTVKYLGETRDYFNSSIAGNGLYYGLPEPLIAFLRIAFLAIALVSVWLLYKYYRRRDPRFWALTTGGVLLTAS FLLLGLGQGYYSMALFPFVMTIVLPNSVLRNWPAWLAVYGFFSMDRWLLGHWPTTGRALEYLKITYGWCLLLIVVMMVLV LRYRDARAAGTLDQGLDPEWMRAQTGTKESATDDDIERPEGESDRRAVAGATDS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50943; Mature: 50943
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSVDALVTGFKNSLAPKTAPPSVATILRSVLWPVAIMAVIHRSYVLGTNGYITDDFGPV CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEECCHHHH YRAVIAFKLHQPVYGENFNYVDPHYIYPPGGTLLLAPFGYLPVDASRYWFITINTIAIVI HHHHHHHHHCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCCEEEEEHHHHHHHH AAYFLLRLFNFTLASVAAPALLLAMFCTESVTNTLVFTNINGVVLLLEVLFFRWLLHGTK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHCCCC KSEWLAGVAIGLTLVIKPLLAPLLLLPLLNRQWRVFAAAFGIPAFFNLVALYGPRKVRIV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHCCCCEEEEE DGWDYLRRTVKYLGETRDYFNSSIAGNGLYYGLPEPLIAFLRIAFLAIALVSVWLLYKYY CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH RRRDPRFWALTTGGVLLTASFLLLGLGQGYYSMALFPFVMTIVLPNSVLRNWPAWLAVYG HCCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH FFSMDRWLLGHWPTTGRALEYLKITYGWCLLLIVVMMVLVLRYRDARAAGTLDQGLDPEW HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHCCCCHHH MRAQTGTKESATDDDIERPEGESDRRAVAGATDS HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVSVDALVTGFKNSLAPKTAPPSVATILRSVLWPVAIMAVIHRSYVLGTNGYITDDFGPV CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEECCHHHH YRAVIAFKLHQPVYGENFNYVDPHYIYPPGGTLLLAPFGYLPVDASRYWFITINTIAIVI HHHHHHHHHCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCCEEEEEHHHHHHHH AAYFLLRLFNFTLASVAAPALLLAMFCTESVTNTLVFTNINGVVLLLEVLFFRWLLHGTK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHCCCC KSEWLAGVAIGLTLVIKPLLAPLLLLPLLNRQWRVFAAAFGIPAFFNLVALYGPRKVRIV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHCCCCEEEEE DGWDYLRRTVKYLGETRDYFNSSIAGNGLYYGLPEPLIAFLRIAFLAIALVSVWLLYKYY CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH RRRDPRFWALTTGGVLLTASFLLLGLGQGYYSMALFPFVMTIVLPNSVLRNWPAWLAVYG HCCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH FFSMDRWLLGHWPTTGRALEYLKITYGWCLLLIVVMMVLVLRYRDARAAGTLDQGLDPEW HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHCCCCHHH MRAQTGTKESATDDDIERPEGESDRRAVAGATDS HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA