| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630060
Identifier: 169630060
GI number: 169630060
Start: 3036004
End: 3037557
Strand: Direct
Name: 169630060
Synonym: MAB_2977
Alternate gene names: NA
Gene position: 3036004-3037557 (Clockwise)
Preceding gene: 169630059
Following gene: 169630061
Centisome position: 59.92
GC content: 69.82
Gene sequence:
>1554_bases ATGCGTGCACGGCTGATGGGGGTGATGGCGGTTGCCCAGCTGCTGACCGGGGTCCTGGCTGGGTGTGCGCCCGGTCCCTC GGCGGGACCGCATTTCGCGATGGACGAGGGCCACGGAAATGTGGGCCCCTCTACGGCACCGCCGCAAAGCGGCCCGCCCG CTATCGACAAGCCCAAGGTGGATCTGTCGTGGCAAGACTGCACCCGTGAGGTGCTCGCCAACGCCAACATCACCACCTCG CCCGCCTTTACGCTCGAGTGCGCGGAGTACAAGGCCCCGCTGGACCCGATCAACGGCGCGCCGGGCAGCGTGACCCTGGG CGCGGTACGCGCCAAGACCTCACAGACTCCCGCCGATGCCGGCCCCCTCGTCTTCACCACGGGCTCCGATCTGCCGTCCT CGGTCCAACTGGCGACATGGCTCAACGGCCCGGGCGCGGAGGTTCTCAAGCAGCGTCCCGTGGTCGCGGTCGACCGCCGC GGTATCGGGCGATCCGATGCCATCACGTGCCGAGACACCTGGGATACGCGGGACATGCGTGACCAGGCCCAGAACCGTGC CGGCGACGACCCGGTGGCGAGCCTGGGCAAGATCGTCGAGACGGCAACCACCAACTGCACCGACACCATCTCCCCCGGAG ATTCCGCGTACAACGACGCGCATGCCGCCGAGGACCTTGAGGCGCTACGCGCCCAATGGGACGTGCCCGCCCTGGCGCTC CTGGGTGTCGGCAGCGGCGCCCGGGTCGCCTTGGCCTATGCCGGATCGCACCCCAACAAAGTGGCGCGGCTCCTGCTCGA CTCGCCGGTGGCCGCCGACATCGCGGCGGAGGCAGCTGCCGAACAGCGGCTCAAGGGCCAGCAGTCCGCATTCGACGCGT TCGCCGCGCAGTGTGTCGCCAACAACTGCCCGCTCGGGCCCGATCCGGCCGGGGCCGTCGGCGACCTGCTGAACCGTGCA CAGAACGGTGGCCTCCCCTGGTCGCGAGCGACGGTCGTCCGGGCCATCACGACGGCGCTGGCGTATCCCGTTGGGGACAG CACCGCCGTCGTACAGAACCTCGCGAACACGTTGAACGCGGCCCGCGGGCCCGACAGCGGCGCATTGGCCCCGTTGGTGG ACCGGGCCAACGCGCTGCGCGATACCGACGGGCAGTTCGTCAACTCCTGCAGCGACGCGCTGGCCCGTCCCACCCCGGAC CGAGTGCGGGAACTGGTCGTCGCCTGGGGCAAGCAGTACCCGTTGTTCGGCCGCACCTCTGCCCTGGAACTGGTGAACTG CCTGCAGTGGCCCAGCGGATCCAAGCCGAACCCGCCGCAGGACCTGAAGATCAACGTGCTGATCCTCGGCGGGCAACACG ATCCGATCTCCGGCAGCGAGGGCGTCTCCGCGACGGCCGCGGTGATCATCAACGCCAAGGCCGCCAGCAAGCGCGTGATG TGGCAGGGCATCGGTCACGGCGCCATCGTCTACACCCCGTGCGCGCAGCCCCCTGCCCTGGCGTACCTGGGTGACGGCAA GCTCCCGGACACCGACACGTTCTGCCCGGCCTAG
Upstream 100 bases:
>100_bases ACGGGATGGCGGCGGGTGTTGCTACTCGCAGATGCGGACGGCTACCTGTTCACACGGTACGTCCCGGCTTAGCCAATGTT CACCCGATACTGTGGTCGGC
Downstream 100 bases:
>100_bases CCGTACTTGCGGGAGCCTTTCGGGGCGCTCAGGTACGGTGCCTGCGTGGTGTCAGTCGATGCATTAGTCACAGGCTTCAA GAACTCTTTGGCACCGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 517; Mature: 517
Protein sequence:
>517_residues MRARLMGVMAVAQLLTGVLAGCAPGPSAGPHFAMDEGHGNVGPSTAPPQSGPPAIDKPKVDLSWQDCTREVLANANITTS PAFTLECAEYKAPLDPINGAPGSVTLGAVRAKTSQTPADAGPLVFTTGSDLPSSVQLATWLNGPGAEVLKQRPVVAVDRR GIGRSDAITCRDTWDTRDMRDQAQNRAGDDPVASLGKIVETATTNCTDTISPGDSAYNDAHAAEDLEALRAQWDVPALAL LGVGSGARVALAYAGSHPNKVARLLLDSPVAADIAAEAAAEQRLKGQQSAFDAFAAQCVANNCPLGPDPAGAVGDLLNRA QNGGLPWSRATVVRAITTALAYPVGDSTAVVQNLANTLNAARGPDSGALAPLVDRANALRDTDGQFVNSCSDALARPTPD RVRELVVAWGKQYPLFGRTSALELVNCLQWPSGSKPNPPQDLKINVLILGGQHDPISGSEGVSATAAVIINAKAASKRVM WQGIGHGAIVYTPCAQPPALAYLGDGKLPDTDTFCPA
Sequences:
>Translated_517_residues MRARLMGVMAVAQLLTGVLAGCAPGPSAGPHFAMDEGHGNVGPSTAPPQSGPPAIDKPKVDLSWQDCTREVLANANITTS PAFTLECAEYKAPLDPINGAPGSVTLGAVRAKTSQTPADAGPLVFTTGSDLPSSVQLATWLNGPGAEVLKQRPVVAVDRR GIGRSDAITCRDTWDTRDMRDQAQNRAGDDPVASLGKIVETATTNCTDTISPGDSAYNDAHAAEDLEALRAQWDVPALAL LGVGSGARVALAYAGSHPNKVARLLLDSPVAADIAAEAAAEQRLKGQQSAFDAFAAQCVANNCPLGPDPAGAVGDLLNRA QNGGLPWSRATVVRAITTALAYPVGDSTAVVQNLANTLNAARGPDSGALAPLVDRANALRDTDGQFVNSCSDALARPTPD RVRELVVAWGKQYPLFGRTSALELVNCLQWPSGSKPNPPQDLKINVLILGGQHDPISGSEGVSATAAVIINAKAASKRVM WQGIGHGAIVYTPCAQPPALAYLGDGKLPDTDTFCPA >Mature_517_residues MRARLMGVMAVAQLLTGVLAGCAPGPSAGPHFAMDEGHGNVGPSTAPPQSGPPAIDKPKVDLSWQDCTREVLANANITTS PAFTLECAEYKAPLDPINGAPGSVTLGAVRAKTSQTPADAGPLVFTTGSDLPSSVQLATWLNGPGAEVLKQRPVVAVDRR GIGRSDAITCRDTWDTRDMRDQAQNRAGDDPVASLGKIVETATTNCTDTISPGDSAYNDAHAAEDLEALRAQWDVPALAL LGVGSGARVALAYAGSHPNKVARLLLDSPVAADIAAEAAAEQRLKGQQSAFDAFAAQCVANNCPLGPDPAGAVGDLLNRA QNGGLPWSRATVVRAITTALAYPVGDSTAVVQNLANTLNAARGPDSGALAPLVDRANALRDTDGQFVNSCSDALARPTPD RVRELVVAWGKQYPLFGRTSALELVNCLQWPSGSKPNPPQDLKINVLILGGQHDPISGSEGVSATAAVIINAKAASKRVM WQGIGHGAIVYTPCAQPPALAYLGDGKLPDTDTFCPA
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S33 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 53378; Mature: 53378
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRARLMGVMAVAQLLTGVLAGCAPGPSAGPHFAMDEGHGNVGPSTAPPQSGPPAIDKPKV CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC DLSWQDCTREVLANANITTSPAFTLECAEYKAPLDPINGAPGSVTLGAVRAKTSQTPADA CCCHHHHHHHHHHCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC GPLVFTTGSDLPSSVQLATWLNGPGAEVLKQRPVVAVDRRGIGRSDAITCRDTWDTRDMR CCEEEECCCCCCCCEEEEEECCCCCHHHHHCCCCEEECCCCCCCCCCEEECCCCCCHHHH DQAQNRAGDDPVASLGKIVETATTNCTDTISPGDSAYNDAHAAEDLEALRAQWDVPALAL HHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEE LGVGSGARVALAYAGSHPNKVARLLLDSPVAADIAAEAAAEQRLKGQQSAFDAFAAQCVA EECCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH NNCPLGPDPAGAVGDLLNRAQNGGLPWSRATVVRAITTALAYPVGDSTAVVQNLANTLNA CCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH ARGPDSGALAPLVDRANALRDTDGQFVNSCSDALARPTPDRVRELVVAWGKQYPLFGRTS CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHH ALELVNCLQWPSGSKPNPPQDLKINVLILGGQHDPISGSEGVSATAAVIINAKAASKRVM HHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCHHCCHHH WQGIGHGAIVYTPCAQPPALAYLGDGKLPDTDTFCPA HHCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCC >Mature Secondary Structure MRARLMGVMAVAQLLTGVLAGCAPGPSAGPHFAMDEGHGNVGPSTAPPQSGPPAIDKPKV CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC DLSWQDCTREVLANANITTSPAFTLECAEYKAPLDPINGAPGSVTLGAVRAKTSQTPADA CCCHHHHHHHHHHCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC GPLVFTTGSDLPSSVQLATWLNGPGAEVLKQRPVVAVDRRGIGRSDAITCRDTWDTRDMR CCEEEECCCCCCCCEEEEEECCCCCHHHHHCCCCEEECCCCCCCCCCEEECCCCCCHHHH DQAQNRAGDDPVASLGKIVETATTNCTDTISPGDSAYNDAHAAEDLEALRAQWDVPALAL HHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEE LGVGSGARVALAYAGSHPNKVARLLLDSPVAADIAAEAAAEQRLKGQQSAFDAFAAQCVA EECCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH NNCPLGPDPAGAVGDLLNRAQNGGLPWSRATVVRAITTALAYPVGDSTAVVQNLANTLNA CCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH ARGPDSGALAPLVDRANALRDTDGQFVNSCSDALARPTPDRVRELVVAWGKQYPLFGRTS CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHH ALELVNCLQWPSGSKPNPPQDLKINVLILGGQHDPISGSEGVSATAAVIINAKAASKRVM HHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCHHCCHHH WQGIGHGAIVYTPCAQPPALAYLGDGKLPDTDTFCPA HHCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]