| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630043
Identifier: 169630043
GI number: 169630043
Start: 3014490
End: 3016538
Strand: Direct
Name: 169630043
Synonym: MAB_2960
Alternate gene names: NA
Gene position: 3014490-3016538 (Clockwise)
Preceding gene: 169630042
Following gene: 169630044
Centisome position: 59.49
GC content: 66.52
Gene sequence:
>2049_bases ATGACGACTGTTCCGTCTCCTGCCGAGGATACGGCGATGCGGATGTGGGAATTCCCCGAGGAAAATCCGGAACCGCCCGC CCGGTGGGGCAAGTATGTCCCCGGCGAACCGCAGCTGCGTGCGGCGGCATTCGGCACGCTGGTCGGCCTCCTGGTAGCGG TACTCATGGGTGCGGCATATGCCGCGCAGCCCGGCGCATCGCTGTGGGCTTTGAACAAGACCATCTTCCCCACCCACTCG CAGGACATCGCGGTGCGCGCGGTGGTGTCCGACCTCAAGAACGCTCAGGACATCCTGGGGAACAACAAACAGCCCTCACC CGATCAGCTCACCCAGGCACGCAGCTCACTCAATGAGGCCAAGCAAGGTTTGGAATTCGTCTCCGACTCCGACGAGCGCA CCTCGCTGCAAAATCTCTATCTGCAGCTCAACCAGCAGCTGCGCCAGTACACCCCCGAACAGGCCCAACAGCTCCCCGCG CTGCCGGCGCCCCCAGGAGTCAACACCGACACAAATCTGGCCGCCAACATCGGGCCCGCGGCACCTGCGTCGTCACCACC GCCCAGTTGGGGGTACGCCACCGCGGCCAGCGCCCCGGCCCCGGCAGCAGAGTCCTACCTGGTCCCGCCGCCCGCGGGCA TCCCGGTCGATCCGGTACCCGACTGGCCGGCACCCGTTGCGCCGCCTTTGACGCCGAACCTGCTGGATCTGGGGGGTTAT GACCCATCGTGGTCCCTGCTGTACGGATACAACGTCTTGGATTGGTTCAACTGGGGGCTATCCGGATTCAACCGGTACGG ATACGACTTCATGGGCTTCGACCGGTGGGGCTATGACCGCTGGGGGTACGACCGGTGGGGCTATGACCGCTGGGGTTACA ACTGGGATGGCTACAACTGGTCGGGATACAACCGCGACGGCCGCGATCGCGACGGCCGCAATGAGTGGGGGCAGATCCAC GACGACGACCCCCGCGACCAGGGGTGGTATGACCGCTACCACCCTTACCGCCAGTACTACGACTGGAAATTCCAGAACAC CAATCCCGTCTACAGCCGGAGCCTCTGGGATCAGTCACATGGAATCGACCCGTCCCAGTACCGAGATTGGAATCTGAATC GCAACTGGGACAACCCGTTGGAACGTGACTGGTCACCGGTCGCCCGCGTCGCCGATCGGCCGCTACTGGCGGAGCCCGTG GTGAACCTGGACGCATCGCTCGCGCAATTCATCACCGACGACAAGTCGGCCCGGTCGTCGCAGGACCTGATCAAGGATCT GTCGAACAAGTCGGCCCGCAACTTCAGCAAGGAGCTTGCCGCTCAGACCCCCCGGCCCGATAGGTCGACCGGACCGGATG CACCTGCTGCCGTAAAGCCGGCCGCTCCACCAGTATTGACGGCTCCGGTGCCGGTGGTGCCACCCAAGGAGGTGCCCGCC GATTTCACGCCTCCGTCGTTGCCCCCTGTTGCGCCGGTGACTCCCGCGCCACGTACGACATCAAGTGCGCCGAGTTCGGC CCCATCGACGGAACCGTCACACACACCGGAACCGTCGTCCGAGCCTCCGGCCAACGGGACAACGAGCAACCCGGGTCCCA CTCCAACCTCTGTCGCGCCGGCACCCACCCAGAAGGATGAGTCCTCCGCACCGGTGACCACCGCCGTCACTCCCACTCAT GAGACACCGGCAACGACTGCTCCGCGCCAGACGGCCACCGTGCCACCGTCACAACCCGTGGAACCCACGACGGCTCCCGA GCCGACCAAACAGCACAGCACGCCGACCCACGATGTGCCGACATCCGAGGCACCCGCACCCCGAGCGACGGCAGAGCCGG CACCCGCAGAGCCCCCCGCCAAGCAGGCGCCCGCCGAGCGAGAAACACCCCCGTCACGTACCGCAGCGCCGGAGCCCGCC GCCCCCACCCGAGAAGCCCCCGCTCGCGAGGCACCCACGCGGGAAGCACCGAGTTACAGCACGGCCACGCAGGCACCCAG CGCGGGGGGCGGCAACAGTGGTGGTGGCAGCGGCGGCGGGCGCCACTAG
Upstream 100 bases:
>100_bases GCTAGGCTGGCGATGGAATACCTAGAGTTCGGTGTGCACTTAGTGCTGATAGTTGTCCCTGCGAGGCTCGGTGGGGACAC CAGTAGTACAGAAGGTTGAG
Downstream 100 bases:
>100_bases CGAGGGCTCCCCATCGCGCCAAGTAAGGGTAGCCTTAGTTCATGCCTACGACATGGATGGACACCGTGGTACGGCAAGTG CGCCGGGTCGGCGACTTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 682; Mature: 681
Protein sequence:
>682_residues MTTVPSPAEDTAMRMWEFPEENPEPPARWGKYVPGEPQLRAAAFGTLVGLLVAVLMGAAYAAQPGASLWALNKTIFPTHS QDIAVRAVVSDLKNAQDILGNNKQPSPDQLTQARSSLNEAKQGLEFVSDSDERTSLQNLYLQLNQQLRQYTPEQAQQLPA LPAPPGVNTDTNLAANIGPAAPASSPPPSWGYATAASAPAPAAESYLVPPPAGIPVDPVPDWPAPVAPPLTPNLLDLGGY DPSWSLLYGYNVLDWFNWGLSGFNRYGYDFMGFDRWGYDRWGYDRWGYDRWGYNWDGYNWSGYNRDGRDRDGRNEWGQIH DDDPRDQGWYDRYHPYRQYYDWKFQNTNPVYSRSLWDQSHGIDPSQYRDWNLNRNWDNPLERDWSPVARVADRPLLAEPV VNLDASLAQFITDDKSARSSQDLIKDLSNKSARNFSKELAAQTPRPDRSTGPDAPAAVKPAAPPVLTAPVPVVPPKEVPA DFTPPSLPPVAPVTPAPRTTSSAPSSAPSTEPSHTPEPSSEPPANGTTSNPGPTPTSVAPAPTQKDESSAPVTTAVTPTH ETPATTAPRQTATVPPSQPVEPTTAPEPTKQHSTPTHDVPTSEAPAPRATAEPAPAEPPAKQAPAERETPPSRTAAPEPA APTREAPAREAPTREAPSYSTATQAPSAGGGNSGGGSGGGRH
Sequences:
>Translated_682_residues MTTVPSPAEDTAMRMWEFPEENPEPPARWGKYVPGEPQLRAAAFGTLVGLLVAVLMGAAYAAQPGASLWALNKTIFPTHS QDIAVRAVVSDLKNAQDILGNNKQPSPDQLTQARSSLNEAKQGLEFVSDSDERTSLQNLYLQLNQQLRQYTPEQAQQLPA LPAPPGVNTDTNLAANIGPAAPASSPPPSWGYATAASAPAPAAESYLVPPPAGIPVDPVPDWPAPVAPPLTPNLLDLGGY DPSWSLLYGYNVLDWFNWGLSGFNRYGYDFMGFDRWGYDRWGYDRWGYDRWGYNWDGYNWSGYNRDGRDRDGRNEWGQIH DDDPRDQGWYDRYHPYRQYYDWKFQNTNPVYSRSLWDQSHGIDPSQYRDWNLNRNWDNPLERDWSPVARVADRPLLAEPV VNLDASLAQFITDDKSARSSQDLIKDLSNKSARNFSKELAAQTPRPDRSTGPDAPAAVKPAAPPVLTAPVPVVPPKEVPA DFTPPSLPPVAPVTPAPRTTSSAPSSAPSTEPSHTPEPSSEPPANGTTSNPGPTPTSVAPAPTQKDESSAPVTTAVTPTH ETPATTAPRQTATVPPSQPVEPTTAPEPTKQHSTPTHDVPTSEAPAPRATAEPAPAEPPAKQAPAERETPPSRTAAPEPA APTREAPAREAPTREAPSYSTATQAPSAGGGNSGGGSGGGRH >Mature_681_residues TTVPSPAEDTAMRMWEFPEENPEPPARWGKYVPGEPQLRAAAFGTLVGLLVAVLMGAAYAAQPGASLWALNKTIFPTHSQ DIAVRAVVSDLKNAQDILGNNKQPSPDQLTQARSSLNEAKQGLEFVSDSDERTSLQNLYLQLNQQLRQYTPEQAQQLPAL PAPPGVNTDTNLAANIGPAAPASSPPPSWGYATAASAPAPAAESYLVPPPAGIPVDPVPDWPAPVAPPLTPNLLDLGGYD PSWSLLYGYNVLDWFNWGLSGFNRYGYDFMGFDRWGYDRWGYDRWGYDRWGYNWDGYNWSGYNRDGRDRDGRNEWGQIHD DDPRDQGWYDRYHPYRQYYDWKFQNTNPVYSRSLWDQSHGIDPSQYRDWNLNRNWDNPLERDWSPVARVADRPLLAEPVV NLDASLAQFITDDKSARSSQDLIKDLSNKSARNFSKELAAQTPRPDRSTGPDAPAAVKPAAPPVLTAPVPVVPPKEVPAD FTPPSLPPVAPVTPAPRTTSSAPSSAPSTEPSHTPEPSSEPPANGTTSNPGPTPTSVAPAPTQKDESSAPVTTAVTPTHE TPATTAPRQTATVPPSQPVEPTTAPEPTKQHSTPTHDVPTSEAPAPRATAEPAPAEPPAKQAPAERETPPSRTAAPEPAA PTREAPAREAPTREAPSYSTATQAPSAGGGNSGGGSGGGRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73555; Mature: 73424
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVPSPAEDTAMRMWEFPEENPEPPARWGKYVPGEPQLRAAAFGTLVGLLVAVLMGAAY CCCCCCCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AAQPGASLWALNKTIFPTHSQDIAVRAVVSDLKNAQDILGNNKQPSPDQLTQARSSLNEA HCCCCCCEEEECCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH KQGLEFVSDSDERTSLQNLYLQLNQQLRQYTPEQAQQLPALPAPPGVNTDTNLAANIGPA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC APASSPPPSWGYATAASAPAPAAESYLVPPPAGIPVDPVPDWPAPVAPPLTPNLLDLGGY CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC DPSWSLLYGYNVLDWFNWGLSGFNRYGYDFMGFDRWGYDRWGYDRWGYDRWGYNWDGYNW CCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGYNRDGRDRDGRNEWGQIHDDDPRDQGWYDRYHPYRQYYDWKFQNTNPVYSRSLWDQSH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCHHHHHCCEEECCCCCHHHHHHHHHHC GIDPSQYRDWNLNRNWDNPLERDWSPVARVADRPLLAEPVVNLDASLAQFITDDKSARSS CCCHHHCCCCCCCCCCCCHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHH QDLIKDLSNKSARNFSKELAAQTPRPDRSTGPDAPAAVKPAAPPVLTAPVPVVPPKEVPA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC DFTPPSLPPVAPVTPAPRTTSSAPSSAPSTEPSHTPEPSSEPPANGTTSNPGPTPTSVAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APTQKDESSAPVTTAVTPTHETPATTAPRQTATVPPSQPVEPTTAPEPTKQHSTPTHDVP CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TSEAPAPRATAEPAPAEPPAKQAPAERETPPSRTAAPEPAAPTREAPAREAPTREAPSYS CCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TATQAPSAGGGNSGGGSGGGRH CHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTVPSPAEDTAMRMWEFPEENPEPPARWGKYVPGEPQLRAAAFGTLVGLLVAVLMGAAY CCCCCCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AAQPGASLWALNKTIFPTHSQDIAVRAVVSDLKNAQDILGNNKQPSPDQLTQARSSLNEA HCCCCCCEEEECCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH KQGLEFVSDSDERTSLQNLYLQLNQQLRQYTPEQAQQLPALPAPPGVNTDTNLAANIGPA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC APASSPPPSWGYATAASAPAPAAESYLVPPPAGIPVDPVPDWPAPVAPPLTPNLLDLGGY CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC DPSWSLLYGYNVLDWFNWGLSGFNRYGYDFMGFDRWGYDRWGYDRWGYDRWGYNWDGYNW CCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGYNRDGRDRDGRNEWGQIHDDDPRDQGWYDRYHPYRQYYDWKFQNTNPVYSRSLWDQSH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCHHHHHCCEEECCCCCHHHHHHHHHHC GIDPSQYRDWNLNRNWDNPLERDWSPVARVADRPLLAEPVVNLDASLAQFITDDKSARSS CCCHHHCCCCCCCCCCCCHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHH QDLIKDLSNKSARNFSKELAAQTPRPDRSTGPDAPAAVKPAAPPVLTAPVPVVPPKEVPA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC DFTPPSLPPVAPVTPAPRTTSSAPSSAPSTEPSHTPEPSSEPPANGTTSNPGPTPTSVAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APTQKDESSAPVTTAVTPTHETPATTAPRQTATVPPSQPVEPTTAPEPTKQHSTPTHDVP CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TSEAPAPRATAEPAPAEPPAKQAPAERETPPSRTAAPEPAAPTREAPAREAPTREAPSYS CCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TATQAPSAGGGNSGGGSGGGRH CHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA