| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630003
Identifier: 169630003
GI number: 169630003
Start: 2972753
End: 2973424
Strand: Reverse
Name: 169630003
Synonym: MAB_2920c
Alternate gene names: NA
Gene position: 2973424-2972753 (Counterclockwise)
Preceding gene: 169630005
Following gene: 169630002
Centisome position: 58.68
GC content: 60.12
Gene sequence:
>672_bases GTGGAGAGCGGACCCGCTCGGCCCGGCTGGCTGGAACTTGGTGTAGCTGCGGCCACCGCTGTCTTTCTGTATCTAGTGGG TGGCGTGGCCGCATACTTCGTGTCGGAAGATTTCCCCATTGCCCTCGGACATGTGAACTTCCTGATTTCAGGGCTTGCAC CGTTGGGAGCTTTTGCTGTTGCGGTCCTCGTTCGGATCCGTGATGTCCGCCCGTTCGGGTTGCGGCATACGAGTCTCTTG TGGCTGCTGACCGGCGTTGTCATCGGCCTGGTGTGCTTCGGGCTTAGTTGGCCGGTTTCGGCGATTTTTGATCCGCTGTT TCCGGGGTCAGAGGGTGTTCAGCAGCCCTACCGTGATGCTGCTCGGTCGGGAGCAGTGCCTCCTATCGTGGCAGTGGGGC TGGGCGGTATCTTGACGCCGCTCGGTGAGGAGGCTTTGTTTCGTGGCGTGCTTGCGACTTTCCTGTTCCGCTGGGGCAGC TGCGTCAGTGTGGTCTTTAGCGCGGCAGTTTTCGCTGTGGCACATGGGATCAACGGCGTGATGCCATTGGCGCTCATGAT CGGTTTGACCAATGGTGTCCTGCTGTGGTGCTCAGGTTCGATCTGGCCTGCGGTCATGGTGCACATCGCCTATAACAGTG CGGGCATCGTGTACCACGGCCTCGGATACTGA
Upstream 100 bases:
>100_bases GGAGATGTTGTTGAGGCAGCGCCACGGCGCGACGAAGCTTGAGTATGCCCGAGGGGCATAGCTGATACTTCGCCCCATGA GTGTTGTAGAGCACTTCGGC
Downstream 100 bases:
>100_bases CTGCCGGGGCTCGCTGTGCCGCTGCGGCACAGCGCAAGTCGCTCTTGACTATGCCGCTACGTCCGAGTGTTGGATGACTG GTGTGACGACATTGCTGAGC
Product: putative abortive infection protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MESGPARPGWLELGVAAATAVFLYLVGGVAAYFVSEDFPIALGHVNFLISGLAPLGAFAVAVLVRIRDVRPFGLRHTSLL WLLTGVVIGLVCFGLSWPVSAIFDPLFPGSEGVQQPYRDAARSGAVPPIVAVGLGGILTPLGEEALFRGVLATFLFRWGS CVSVVFSAAVFAVAHGINGVMPLALMIGLTNGVLLWCSGSIWPAVMVHIAYNSAGIVYHGLGY
Sequences:
>Translated_223_residues MESGPARPGWLELGVAAATAVFLYLVGGVAAYFVSEDFPIALGHVNFLISGLAPLGAFAVAVLVRIRDVRPFGLRHTSLL WLLTGVVIGLVCFGLSWPVSAIFDPLFPGSEGVQQPYRDAARSGAVPPIVAVGLGGILTPLGEEALFRGVLATFLFRWGS CVSVVFSAAVFAVAHGINGVMPLALMIGLTNGVLLWCSGSIWPAVMVHIAYNSAGIVYHGLGY >Mature_223_residues MESGPARPGWLELGVAAATAVFLYLVGGVAAYFVSEDFPIALGHVNFLISGLAPLGAFAVAVLVRIRDVRPFGLRHTSLL WLLTGVVIGLVCFGLSWPVSAIFDPLFPGSEGVQQPYRDAARSGAVPPIVAVGLGGILTPLGEEALFRGVLATFLFRWGS CVSVVFSAAVFAVAHGINGVMPLALMIGLTNGVLLWCSGSIWPAVMVHIAYNSAGIVYHGLGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23322; Mature: 23322
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESGPARPGWLELGVAAATAVFLYLVGGVAAYFVSEDFPIALGHVNFLISGLAPLGAFAV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH AVLVRIRDVRPFGLRHTSLLWLLTGVVIGLVCFGLSWPVSAIFDPLFPGSEGVQQPYRDA HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHH ARSGAVPPIVAVGLGGILTPLGEEALFRGVLATFLFRWGSCVSVVFSAAVFAVAHGINGV HHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH MPLALMIGLTNGVLLWCSGSIWPAVMVHIAYNSAGIVYHGLGY HHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCEEEECCCC >Mature Secondary Structure MESGPARPGWLELGVAAATAVFLYLVGGVAAYFVSEDFPIALGHVNFLISGLAPLGAFAV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH AVLVRIRDVRPFGLRHTSLLWLLTGVVIGLVCFGLSWPVSAIFDPLFPGSEGVQQPYRDA HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHH ARSGAVPPIVAVGLGGILTPLGEEALFRGVLATFLFRWGSCVSVVFSAAVFAVAHGINGV HHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH MPLALMIGLTNGVLLWCSGSIWPAVMVHIAYNSAGIVYHGLGY HHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA