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The map label for this gene is glxA [H]

Identifier: 169629983

GI number: 169629983

Start: 2951506

End: 2952600

Strand: Reverse

Name: glxA [H]

Synonym: MAB_2899c

Alternate gene names: 169629983

Gene position: 2952600-2951506 (Counterclockwise)

Preceding gene: 169629985

Following gene: 169629982

Centisome position: 58.27

GC content: 69.13

Gene sequence:

>1095_bases
ATGCGTTCTGCGAGAGGGCCTCACTCTGGGGAGCCGGGTCGTTCGGGCGAGCCTCACTCTGGGCGGCTGGGTCGTTCGGG
CGAGCCTCACTCCGGGCGGCTGGGTCGTTCGGGCGAGCCTCACTCCGGGCGGCTGGGTCGTTCGGGCGAGCCTCACTCCG
TCGTCGTTCTTGCGCTTCCCGGAACCATCGGCTTCGATCTGGCCACTGCGGTTGAGGTGTTCCGCCGCGTGTACCTCGCC
GACGGCAGCAGGCCCTACCTCGTGCGGGTGTGTGGCACCGAGCCCGTGGTCTCCGCGGGACCGTTCGGCATCGCGACAGA
TCTTGGGCTCGAGGCTGTTTCGGAGGCCGAGACCATCGTGGTTCCCGCGCGTGACAACCCCACCGCGCCCCTACCCGAGG
GCGTCCTCGATGCGCTGAGGGGCGCCTACGAGCGCGGAACGCGCATCGCCTCCATATGCGCCGGTGCCTTCACACTCGCT
GAAGCCGGGATTCTGGACGGCAAGCGCGCCACCACGCACTGGCTCGCCGCCGACCTGTTCCGCGAGAGGTACCCGGCGGT
GCACCTGGACGCCGACGTGCTGTACGTCGACGAGGGGCAGGTGCTCACCTCCGCGGGTGCCGCCGCCGGGCTCGACCTAT
GTCTGCACATCGTGGCGCGCGATCACGGCGCGGCGGTCGCCGCGGAAGCTGCCCGTGTTGCGGTGGCCCCGCTGCACCGC
GACGGCGGGCAAGCGCAGTACGTCATCCGGAATCGCCGGCGCGCCGAGGTCAGCCTTGGCGAGATATTGGCCTGGATCGA
ACACAACGCCCATCGCGAACTATCCCTGGAGGACCTCGCGACCGAGGCGTCCACCAGCGTGCGCAGCCTCAACCGGCGGT
TTCGGGCCGAAACAGGCCAGACGCCCATGCAGTGGCTGACCGGAGTACGGGTCCGTCATGCCCAGCAGCTCCTGGAGCGA
TCGGCGGATTCCGTGGAGTGGATCGGGCGTGAGGTGGGGTTCGGCTCACCTGCGAATTTCCGGGAGCAGTTCCGTCGTCT
CACCGGGGTCTCGCCCCTGGCATATCGGAACACATTCCGCGCGCAATCGGCCTGA

Upstream 100 bases:

>100_bases
TCTGCATCAACACATCGTCGTGCAGTGGCCGTTTCCGTAGAAGTGGCCAAATAGCCACTGACCGATGAGATCTTGCCATT
AGCGCGATAGGCTCACCCGC

Downstream 100 bases:

>100_bases
GTGCGCATGGCACCCATCGGGCTGGGAAGTGGCTGGTGCGGACCGATAGCATGAGTTCGCAAACCCCCCGTCTCTGAATT
GGAGAACTGCCGATGACTGC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MRSARGPHSGEPGRSGEPHSGRLGRSGEPHSGRLGRSGEPHSGRLGRSGEPHSVVVLALPGTIGFDLATAVEVFRRVYLA
DGSRPYLVRVCGTEPVVSAGPFGIATDLGLEAVSEAETIVVPARDNPTAPLPEGVLDALRGAYERGTRIASICAGAFTLA
EAGILDGKRATTHWLAADLFRERYPAVHLDADVLYVDEGQVLTSAGAAAGLDLCLHIVARDHGAAVAAEAARVAVAPLHR
DGGQAQYVIRNRRRAEVSLGEILAWIEHNAHRELSLEDLATEASTSVRSLNRRFRAETGQTPMQWLTGVRVRHAQQLLER
SADSVEWIGREVGFGSPANFREQFRRLTGVSPLAYRNTFRAQSA

Sequences:

>Translated_364_residues
MRSARGPHSGEPGRSGEPHSGRLGRSGEPHSGRLGRSGEPHSGRLGRSGEPHSVVVLALPGTIGFDLATAVEVFRRVYLA
DGSRPYLVRVCGTEPVVSAGPFGIATDLGLEAVSEAETIVVPARDNPTAPLPEGVLDALRGAYERGTRIASICAGAFTLA
EAGILDGKRATTHWLAADLFRERYPAVHLDADVLYVDEGQVLTSAGAAAGLDLCLHIVARDHGAAVAAEAARVAVAPLHR
DGGQAQYVIRNRRRAEVSLGEILAWIEHNAHRELSLEDLATEASTSVRSLNRRFRAETGQTPMQWLTGVRVRHAQQLLER
SADSVEWIGREVGFGSPANFREQFRRLTGVSPLAYRNTFRAQSA
>Mature_364_residues
MRSARGPHSGEPGRSGEPHSGRLGRSGEPHSGRLGRSGEPHSGRLGRSGEPHSVVVLALPGTIGFDLATAVEVFRRVYLA
DGSRPYLVRVCGTEPVVSAGPFGIATDLGLEAVSEAETIVVPARDNPTAPLPEGVLDALRGAYERGTRIASICAGAFTLA
EAGILDGKRATTHWLAADLFRERYPAVHLDADVLYVDEGQVLTSAGAAAGLDLCLHIVARDHGAAVAAEAARVAVAPLHR
DGGQAQYVIRNRRRAEVSLGEILAWIEHNAHRELSLEDLATEASTSVRSLNRRFRAETGQTPMQWLTGVRVRHAQQLLER
SADSVEWIGREVGFGSPANFREQFRRLTGVSPLAYRNTFRAQSA

Specific function: Activator Of The L-Rhamnose Operon. Rhar Putatively Autoregulates Its Synthesis. [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 39043; Mature: 39043

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSARGPHSGEPGRSGEPHSGRLGRSGEPHSGRLGRSGEPHSGRLGRSGEPHSVVVLALP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
GTIGFDLATAVEVFRRVYLADGSRPYLVRVCGTEPVVSAGPFGIATDLGLEAVSEAETIV
CCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEE
VPARDNPTAPLPEGVLDALRGAYERGTRIASICAGAFTLAEAGILDGKRATTHWLAADLF
EECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
RERYPAVHLDADVLYVDEGQVLTSAGAAAGLDLCLHIVARDHGAAVAAEAARVAVAPLHR
HHHCCEEEECCEEEEECCCCEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHEEEEECCC
DGGQAQYVIRNRRRAEVSLGEILAWIEHNAHRELSLEDLATEASTSVRSLNRRFRAETGQ
CCCCEEHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
TPMQWLTGVRVRHAQQLLERSADSVEWIGREVGFGSPANFREQFRRLTGVSPLAYRNTFR
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHCHH
AQSA
CCCC
>Mature Secondary Structure
MRSARGPHSGEPGRSGEPHSGRLGRSGEPHSGRLGRSGEPHSGRLGRSGEPHSVVVLALP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
GTIGFDLATAVEVFRRVYLADGSRPYLVRVCGTEPVVSAGPFGIATDLGLEAVSEAETIV
CCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEE
VPARDNPTAPLPEGVLDALRGAYERGTRIASICAGAFTLAEAGILDGKRATTHWLAADLF
EECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
RERYPAVHLDADVLYVDEGQVLTSAGAAAGLDLCLHIVARDHGAAVAAEAARVAVAPLHR
HHHCCEEEECCEEEEECCCCEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHEEEEECCC
DGGQAQYVIRNRRRAEVSLGEILAWIEHNAHRELSLEDLATEASTSVRSLNRRFRAETGQ
CCCCEEHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
TPMQWLTGVRVRHAQQLLERSADSVEWIGREVGFGSPANFREQFRRLTGVSPLAYRNTFR
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHCHH
AQSA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]