| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629979
Identifier: 169629979
GI number: 169629979
Start: 2947197
End: 2948162
Strand: Reverse
Name: 169629979
Synonym: MAB_2895c
Alternate gene names: NA
Gene position: 2948162-2947197 (Counterclockwise)
Preceding gene: 169629980
Following gene: 169629978
Centisome position: 58.18
GC content: 66.36
Gene sequence:
>966_bases ATGAGTGTCTGGGGAGAGCGCGCCGCCGACTGGGGATATGCCGCGGGATGGAATCTGACGCAGATCACTCCAGACCTGCT TGCCCGCGCCATATTCGACGTCGGCGCCATGGCCGGTGCCCGTAAAGGGGGACCCGAGCAGCTGCGCAAGAACCTCGCGC GGGTGCTGGACGTACACCCCCGGGAGGTGCCCGACCGGCTCATCATCGACTCGATGCGTTCCTACGCACGGTACTGGCGC GAAGCGTTCCGGCTGCCCTCGCAGAACATGGAGCGTCTCGCCGCCCGCCTGGATAGTTGCCTATACGGCCGTCGGAACCT TGACGCCTCGCAGGCCGAAGGGCGGGGAACGGTTATCGCGCTGCCGCACAGCGGAAACTGGGACATGGCGGGGGTGTGGC TGGCGCAGACCTACGGCACCTTCACCACCGTGGCCGAGCGTCTGAAACCCGAGTCGTTGTACCGGCGCTTCCTGGACTAT CGCGAGACCCTGGGATTCGAGGTGCTTGCGCTCACCGGCGATGCGTCGGGGCCATATGAGCTGCTGGCCCAGCGATTGCG GGAGAACCGTGTCGTCTGCCTCATGGCCGATCGCGATCTGAGTCGCAGTGGCGTACCCGTCGATTTTTTCGGTGCCGAGG CCCGCATGCCCGCAGGGCCCGCACGTCTGGCGATCGACACCGGAGCACGTCTGTTACCTGCGCACTGCTGGTTTGAACCG CATGAGCGGTGGGGAGTCCGCATCCATCAGGCCGTTGATACCTCGGCGGGCGATGTCGCGGTCGCCACACAGGCGATGGC CGATGTCTTCGCCGCCAATATCGCCGAACGACCCGCGGATTGGCACATGCTGCAGCCGCTATGGCTCGACGATTTGTCCG AGGAGCGCCGCTCCAAACTGCGGACGGCGCCGCCGCAGGAGCCTGCGGCCTCCCGGGAGACCGATCCCGTTGGTGGGCAG GCGTAA
Upstream 100 bases:
>100_bases CGGTGGCCCAGCGTATGCATGCGGTCCGTACCTCTCCCGGAGCGCTGGACCTGCTGCCCAATTCCGATGCGGGACAGGAC ACCGCGGAGACGAATCAGCC
Downstream 100 bases:
>100_bases TGCGCATCGGGATGGTCTGCCCGTACTCCTTTGACGTACCGGGTGGCGTCCAGTCCCATGTCGTGCAGCTGGCAGAGGTC ATGCGTGATCGCGGCCACCA
Product: lipid A biosynthesis lauroyl acyltransferase
Products: NA
Alternate protein names: PIM acyltransferase [H]
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MSVWGERAADWGYAAGWNLTQITPDLLARAIFDVGAMAGARKGGPEQLRKNLARVLDVHPREVPDRLIIDSMRSYARYWR EAFRLPSQNMERLAARLDSCLYGRRNLDASQAEGRGTVIALPHSGNWDMAGVWLAQTYGTFTTVAERLKPESLYRRFLDY RETLGFEVLALTGDASGPYELLAQRLRENRVVCLMADRDLSRSGVPVDFFGAEARMPAGPARLAIDTGARLLPAHCWFEP HERWGVRIHQAVDTSAGDVAVATQAMADVFAANIAERPADWHMLQPLWLDDLSEERRSKLRTAPPQEPAASRETDPVGGQ A
Sequences:
>Translated_321_residues MSVWGERAADWGYAAGWNLTQITPDLLARAIFDVGAMAGARKGGPEQLRKNLARVLDVHPREVPDRLIIDSMRSYARYWR EAFRLPSQNMERLAARLDSCLYGRRNLDASQAEGRGTVIALPHSGNWDMAGVWLAQTYGTFTTVAERLKPESLYRRFLDY RETLGFEVLALTGDASGPYELLAQRLRENRVVCLMADRDLSRSGVPVDFFGAEARMPAGPARLAIDTGARLLPAHCWFEP HERWGVRIHQAVDTSAGDVAVATQAMADVFAANIAERPADWHMLQPLWLDDLSEERRSKLRTAPPQEPAASRETDPVGGQ A >Mature_320_residues SVWGERAADWGYAAGWNLTQITPDLLARAIFDVGAMAGARKGGPEQLRKNLARVLDVHPREVPDRLIIDSMRSYARYWRE AFRLPSQNMERLAARLDSCLYGRRNLDASQAEGRGTVIALPHSGNWDMAGVWLAQTYGTFTTVAERLKPESLYRRFLDYR ETLGFEVLALTGDASGPYELLAQRLRENRVVCLMADRDLSRSGVPVDFFGAEARMPAGPARLAIDTGARLLPAHCWFEPH ERWGVRIHQAVDTSAGDVAVATQAMADVFAANIAERPADWHMLQPLWLDDLSEERRSKLRTAPPQEPAASRETDPVGGQA
Specific function: Catalyzes the acylation to the position 6 of the alpha- 1,2-linked mannose residue of the phosphatidyl-myo-inositol dimannoside (PIM2) or monomannoside (PIM1) [H]
COG id: COG1560
COG function: function code M; Lauroyl/myristoyl acyltransferase
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the htrB/msbB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004960 [H]
Pfam domain/function: PF03279 Lip_A_acyltrans [H]
EC number: 2.3.1.-
Molecular weight: Translated: 35783; Mature: 35652
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVWGERAADWGYAAGWNLTQITPDLLARAIFDVGAMAGARKGGPEQLRKNLARVLDVHP CCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC REVPDRLIIDSMRSYARYWREAFRLPSQNMERLAARLDSCLYGRRNLDASQAEGRGTVIA HHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE LPHSGNWDMAGVWLAQTYGTFTTVAERLKPESLYRRFLDYRETLGFEVLALTGDASGPYE ECCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHH LLAQRLRENRVVCLMADRDLSRSGVPVDFFGAEARMPAGPARLAIDTGARLLPAHCWFEP HHHHHHHCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCHHHHHCCCCC HERWGVRIHQAVDTSAGDVAVATQAMADVFAANIAERPADWHMLQPLWLDDLSEERRSKL HHHHCEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHH RTAPPQEPAASRETDPVGGQA CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SVWGERAADWGYAAGWNLTQITPDLLARAIFDVGAMAGARKGGPEQLRKNLARVLDVHP CCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC REVPDRLIIDSMRSYARYWREAFRLPSQNMERLAARLDSCLYGRRNLDASQAEGRGTVIA HHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE LPHSGNWDMAGVWLAQTYGTFTTVAERLKPESLYRRFLDYRETLGFEVLALTGDASGPYE ECCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHH LLAQRLRENRVVCLMADRDLSRSGVPVDFFGAEARMPAGPARLAIDTGARLLPAHCWFEP HHHHHHHCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCHHHHHCCCCC HERWGVRIHQAVDTSAGDVAVATQAMADVFAANIAERPADWHMLQPLWLDDLSEERRSKL HHHHCEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHH RTAPPQEPAASRETDPVGGQA CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA