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The map label for this gene is rpe [H]

Identifier: 169629893

GI number: 169629893

Start: 2857443

End: 2858126

Strand: Reverse

Name: rpe [H]

Synonym: MAB_2809c

Alternate gene names: 169629893

Gene position: 2858126-2857443 (Counterclockwise)

Preceding gene: 169629894

Following gene: 169629892

Centisome position: 56.4

GC content: 65.64

Gene sequence:

>684_bases
ATGTCTCACCGCGCTCCCATGATCGCCCCCTCGATCCTGTCCGCCGATTTCGCACGCCTCGCCGAGGAGATGGCGGCCGT
TGAAGGAGCCGACTGGCTGCACGTGGACGTGATGGACGGGCATTTCGTGCCCAACCTCACCCTGGGGCTGCCCGTGGTCG
ACAGTCTGCTCGCCGCAACCGATATCCCCATCGACTGCCACTTGATGATCGACAACCCGGATCGCTGGGCACCTGGCTAT
GCCGAGGCCGGCGCGCATAATGTGACATTCCACGCCGAGGCCACCGACAATCCCGTCGGGGTCGCGCGCGACATTCGGGC
GGCGGGTGCGAAGGCCGGGCTGAGTATCAAGCCGGGCACACCGCTGGAGCCATACCTTGAGGTGCTGAAGGACTTTGACA
CGTTGTTGGTCATGTCGGTCGAACCGGGGTTCGGCGGGCAATCCTTCATCGCGAGCGTGTTGGACAAGGTGCGCGCGGTG
CGCAAACTCGTCGACTCTGGCGAGCTGTCGGTGCTGGTGGAAATCGACGGCGGCATCAACACCGACACCATCGAGCAGGC
CGCCGAGGCGGGCGTCGACTGTTTTGTCGCAGGTTCGGCGGTCTATGGGGCGCAGAACCCCGAAGCGGCGGTGCGGGCGC
TGCGCGAGCAAGCCGCCAGGGCAGCAGCACATTCGGCCCGTTGA

Upstream 100 bases:

>100_bases
GCAGATGCGGTGCAGCTATGGCCGCACCGGCACGGCACTGACGCCATGTTCACCGCCCTCCTGCGTAAACACGCATGAAG
GGGCACATAAGCTGAACGAC

Downstream 100 bases:

>100_bases
TTGATATGACCAACCCGATCGGCCTCGACGAGGCCATGGATCTGGCGATCCGGGCCGCCGAAGAGGTCAAGGGCAGCACC
TATCCCAATCCGCCTGTCGG

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSHRAPMIAPSILSADFARLAEEMAAVEGADWLHVDVMDGHFVPNLTLGLPVVDSLLAATDIPIDCHLMIDNPDRWAPGY
AEAGAHNVTFHAEATDNPVGVARDIRAAGAKAGLSIKPGTPLEPYLEVLKDFDTLLVMSVEPGFGGQSFIASVLDKVRAV
RKLVDSGELSVLVEIDGGINTDTIEQAAEAGVDCFVAGSAVYGAQNPEAAVRALREQAARAAAHSAR

Sequences:

>Translated_227_residues
MSHRAPMIAPSILSADFARLAEEMAAVEGADWLHVDVMDGHFVPNLTLGLPVVDSLLAATDIPIDCHLMIDNPDRWAPGY
AEAGAHNVTFHAEATDNPVGVARDIRAAGAKAGLSIKPGTPLEPYLEVLKDFDTLLVMSVEPGFGGQSFIASVLDKVRAV
RKLVDSGELSVLVEIDGGINTDTIEQAAEAGVDCFVAGSAVYGAQNPEAAVRALREQAARAAAHSAR
>Mature_226_residues
SHRAPMIAPSILSADFARLAEEMAAVEGADWLHVDVMDGHFVPNLTLGLPVVDSLLAATDIPIDCHLMIDNPDRWAPGYA
EAGAHNVTFHAEATDNPVGVARDIRAAGAKAGLSIKPGTPLEPYLEVLKDFDTLLVMSVEPGFGGQSFIASVLDKVRAVR
KLVDSGELSVLVEIDGGINTDTIEQAAEAGVDCFVAGSAVYGAQNPEAAVRALREQAARAAAHSAR

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=219, Percent_Identity=44.7488584474886, Blast_Score=186, Evalue=2e-47,
Organism=Homo sapiens, GI219879828, Length=219, Percent_Identity=43.37899543379, Blast_Score=176, Evalue=1e-44,
Organism=Homo sapiens, GI24307923, Length=174, Percent_Identity=37.3563218390805, Blast_Score=121, Evalue=4e-28,
Organism=Escherichia coli, GI1789788, Length=219, Percent_Identity=45.662100456621, Blast_Score=187, Evalue=4e-49,
Organism=Escherichia coli, GI1790523, Length=214, Percent_Identity=35.0467289719626, Blast_Score=140, Evalue=8e-35,
Organism=Escherichia coli, GI1790754, Length=207, Percent_Identity=31.8840579710145, Blast_Score=108, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17552948, Length=217, Percent_Identity=44.7004608294931, Blast_Score=187, Evalue=5e-48,
Organism=Saccharomyces cerevisiae, GI6322341, Length=230, Percent_Identity=41.7391304347826, Blast_Score=194, Evalue=1e-50,
Organism=Drosophila melanogaster, GI24586301, Length=212, Percent_Identity=43.3962264150943, Blast_Score=173, Evalue=1e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 23832; Mature: 23701

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHRAPMIAPSILSADFARLAEEMAAVEGADWLHVDVMDGHFVPNLTLGLPVVDSLLAAT
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEECHHHHHHHHHHC
DIPIDCHLMIDNPDRWAPGYAEAGAHNVTFHAEATDNPVGVARDIRAAGAKAGLSIKPGT
CCCEEEEEEECCCCCCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCEECCCC
PLEPYLEVLKDFDTLLVMSVEPGFGGQSFIASVLDKVRAVRKLVDSGELSVLVEIDGGIN
CHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
TDTIEQAAEAGVDCFVAGSAVYGAQNPEAAVRALREQAARAAAHSAR
HHHHHHHHHCCCEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SHRAPMIAPSILSADFARLAEEMAAVEGADWLHVDVMDGHFVPNLTLGLPVVDSLLAAT
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEECHHHHHHHHHHC
DIPIDCHLMIDNPDRWAPGYAEAGAHNVTFHAEATDNPVGVARDIRAAGAKAGLSIKPGT
CCCEEEEEEECCCCCCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCEECCCC
PLEPYLEVLKDFDTLLVMSVEPGFGGQSFIASVLDKVRAVRKLVDSGELSVLVEIDGGIN
CHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
TDTIEQAAEAGVDCFVAGSAVYGAQNPEAAVRALREQAARAAAHSAR
HHHHHHHHHCCCEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]