| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629864
Identifier: 169629864
GI number: 169629864
Start: 2827207
End: 2828544
Strand: Reverse
Name: 169629864
Synonym: MAB_2780c
Alternate gene names: NA
Gene position: 2828544-2827207 (Counterclockwise)
Preceding gene: 169629865
Following gene: 169629863
Centisome position: 55.82
GC content: 65.4
Gene sequence:
>1338_bases GTGGACTTCCCCGAACAGTTGAAAACCGAAGGGGTCCTTGGCAAAAACTCCGGGGGCTCTTCCGGCGGGGAGTCACATCC TTCGACGTCCGGCCTCCCGCGGGCGCTGCGCCCGATGCGACACCGCGACTATCGACTGCTCACGCTTGGCCTCGCGATCA CGCTGCTGGGCAACGGCATGTGGACTGTCGCGCTCGTCTGGCAGGTCATCCGGATGGGGTTGGGGCCGGCACAAGTTGCC GTTGTCGGTACCACGTTCAGCGTCGGCCTGCTGCTCAGCGTGCTACCGGCAGGCGTGGCGGCCGACCGTCTGCCCAAGCT GTGGGTGATGCGGTGCTCGCTCGCGGTGCAGACCGCATTGATGCTGACCACCGCGACCCTTGCGCTGACCGGCGCGGCCC ATATCTGGCATTTGGCACTGAACTCATTGCTGTTCGGTATCGCCGAGGGTTTCTACATACCGGCCTATACCGCATTGTTG CCCAGTCTGCTCCCTGCCGATGAGCTATTGGCCGCCAACGGAATCGAAGGCATCCTGCGGCCGGTGATGCAGCTGGCCGC AGGCCCTGCGGTAAGCGCGGCCATCGTGAGCGTGTGGTCGCCGGGTGGCGCATTCCTACTGGAGGGCATGCTCGTCGGCG CGGGTCTGAGTTGCCTGCTGCTGGTCCGGCACAAGCATGAGCCGCCCGCATCCGCGGAGGTGCGGCAGCACCCGTTGCGT CGTGCCCTCGCCGATTTGGCAGAGGGATTCCGGTACATGGTGCGCACCACCTGGTTTTTCGCCACACTGCTGTTCGCGAT CGGCTACGTGCTGGTGGTCGTGGGCCCCATCGAGATACTGCTGCCGTTCGTCATCCGCGATCACGGCGGCGACCCCGGCG CCCATGCCACGGTATTGGCGCTTTTCGGTCTGGCGGGAGCGGTTGGCTCATTCATCGTGTCGTCACTACCGTTGGCCCGC CGATATTTGACGGTGATGATCCTGATGTGGGGAGCGGGCTCGTTACCCCTGATCTTCATCGGGTTCACCGGCCACGTCTG GATGATCGCGGTCGCCATGATCATCGTCGGCGGCACCATGCAGGCGGCCAACGTCATCTGGGGCACGCTGATGCAGCGTC GCGTGCCCGAGGAGATGCTGGGCCGTGCGGCCAGCATGGACTTCTTCGTCTCCCTGGTCGGGCTGCCGGCATCCTTCGCG CTGGTGGTTCCCGTGGCACATGTCATCGGCAACACGACGGTGTTCGTCATCGCGGGAGTGGCGCCGCTGGTGCTGGCAGC CGCCGCCCATATCGTCGCGCGACTGGGCCGGGACGAAATGGCTCACCCCCTGGGCTAA
Upstream 100 bases:
>100_bases TCCGCCGTGACCCCCGAGCTGCTCGAAGAGGCCTAGTCTGCCGCTCGCGGCGGTCGAAAAACGTTGGCGAATTGTCGGAG CGCTTTCGTACCCTGGATTG
Downstream 100 bases:
>100_bases TGTGAGTGCCGATAACGGGTACACCACATCTCAAACCGACAAAGAGGGAGCGCTACGTGACTGTCCGGGTAGGCGTAAAC GGGTTTGGCCGGATCGGCCG
Product: putative transporter
Products: NA
Alternate protein names: Tetracycline-Resistance Determinant TetV; H+ Antiporter Protein; Facilitator Transporter; MFS Transporter; Transmembrane Efflux Protein; Facilitator Superfamily Transporter
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MDFPEQLKTEGVLGKNSGGSSGGESHPSTSGLPRALRPMRHRDYRLLTLGLAITLLGNGMWTVALVWQVIRMGLGPAQVA VVGTTFSVGLLLSVLPAGVAADRLPKLWVMRCSLAVQTALMLTTATLALTGAAHIWHLALNSLLFGIAEGFYIPAYTALL PSLLPADELLAANGIEGILRPVMQLAAGPAVSAAIVSVWSPGGAFLLEGMLVGAGLSCLLLVRHKHEPPASAEVRQHPLR RALADLAEGFRYMVRTTWFFATLLFAIGYVLVVVGPIEILLPFVIRDHGGDPGAHATVLALFGLAGAVGSFIVSSLPLAR RYLTVMILMWGAGSLPLIFIGFTGHVWMIAVAMIIVGGTMQAANVIWGTLMQRRVPEEMLGRAASMDFFVSLVGLPASFA LVVPVAHVIGNTTVFVIAGVAPLVLAAAAHIVARLGRDEMAHPLG
Sequences:
>Translated_445_residues MDFPEQLKTEGVLGKNSGGSSGGESHPSTSGLPRALRPMRHRDYRLLTLGLAITLLGNGMWTVALVWQVIRMGLGPAQVA VVGTTFSVGLLLSVLPAGVAADRLPKLWVMRCSLAVQTALMLTTATLALTGAAHIWHLALNSLLFGIAEGFYIPAYTALL PSLLPADELLAANGIEGILRPVMQLAAGPAVSAAIVSVWSPGGAFLLEGMLVGAGLSCLLLVRHKHEPPASAEVRQHPLR RALADLAEGFRYMVRTTWFFATLLFAIGYVLVVVGPIEILLPFVIRDHGGDPGAHATVLALFGLAGAVGSFIVSSLPLAR RYLTVMILMWGAGSLPLIFIGFTGHVWMIAVAMIIVGGTMQAANVIWGTLMQRRVPEEMLGRAASMDFFVSLVGLPASFA LVVPVAHVIGNTTVFVIAGVAPLVLAAAAHIVARLGRDEMAHPLG >Mature_445_residues MDFPEQLKTEGVLGKNSGGSSGGESHPSTSGLPRALRPMRHRDYRLLTLGLAITLLGNGMWTVALVWQVIRMGLGPAQVA VVGTTFSVGLLLSVLPAGVAADRLPKLWVMRCSLAVQTALMLTTATLALTGAAHIWHLALNSLLFGIAEGFYIPAYTALL PSLLPADELLAANGIEGILRPVMQLAAGPAVSAAIVSVWSPGGAFLLEGMLVGAGLSCLLLVRHKHEPPASAEVRQHPLR RALADLAEGFRYMVRTTWFFATLLFAIGYVLVVVGPIEILLPFVIRDHGGDPGAHATVLALFGLAGAVGSFIVSSLPLAR RYLTVMILMWGAGSLPLIFIGFTGHVWMIAVAMIIVGGTMQAANVIWGTLMQRRVPEEMLGRAASMDFFVSLVGLPASFA LVVPVAHVIGNTTVFVIAGVAPLVLAAAAHIVARLGRDEMAHPLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46875; Mature: 46875
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFPEQLKTEGVLGKNSGGSSGGESHPSTSGLPRALRPMRHRDYRLLTLGLAITLLGNGM CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCH WTVALVWQVIRMGLGPAQVAVVGTTFSVGLLLSVLPAGVAADRLPKLWVMRCSLAVQTAL HHHHHHHHHHHHCCCHHHEEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH MLTTATLALTGAAHIWHLALNSLLFGIAEGFYIPAYTALLPSLLPADELLAANGIEGILR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHCCHHHHHH PVMQLAAGPAVSAAIVSVWSPGGAFLLEGMLVGAGLSCLLLVRHKHEPPASAEVRQHPLR HHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHH RALADLAEGFRYMVRTTWFFATLLFAIGYVLVVVGPIEILLPFVIRDHGGDPGAHATVLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LFGLAGAVGSFIVSSLPLARRYLTVMILMWGAGSLPLIFIGFTGHVWMIAVAMIIVGGTM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCH QAANVIWGTLMQRRVPEEMLGRAASMDFFVSLVGLPASFALVVPVAHVIGNTTVFVIAGV HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEHHHH APLVLAAAAHIVARLGRDEMAHPLG HHHHHHHHHHHHHHHCCHHCCCCCC >Mature Secondary Structure MDFPEQLKTEGVLGKNSGGSSGGESHPSTSGLPRALRPMRHRDYRLLTLGLAITLLGNGM CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCH WTVALVWQVIRMGLGPAQVAVVGTTFSVGLLLSVLPAGVAADRLPKLWVMRCSLAVQTAL HHHHHHHHHHHHCCCHHHEEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH MLTTATLALTGAAHIWHLALNSLLFGIAEGFYIPAYTALLPSLLPADELLAANGIEGILR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHCCHHHHHH PVMQLAAGPAVSAAIVSVWSPGGAFLLEGMLVGAGLSCLLLVRHKHEPPASAEVRQHPLR HHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHH RALADLAEGFRYMVRTTWFFATLLFAIGYVLVVVGPIEILLPFVIRDHGGDPGAHATVLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LFGLAGAVGSFIVSSLPLARRYLTVMILMWGAGSLPLIFIGFTGHVWMIAVAMIIVGGTM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCH QAANVIWGTLMQRRVPEEMLGRAASMDFFVSLVGLPASFALVVPVAHVIGNTTVFVIAGV HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEHHHH APLVLAAAAHIVARLGRDEMAHPLG HHHHHHHHHHHHHHHCCHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA