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The map label for this gene is iap [H]

Identifier: 169629811

GI number: 169629811

Start: 2775679

End: 2776401

Strand: Reverse

Name: iap [H]

Synonym: MAB_2727c

Alternate gene names: 169629811

Gene position: 2776401-2775679 (Counterclockwise)

Preceding gene: 169629812

Following gene: 169629810

Centisome position: 54.79

GC content: 66.8

Gene sequence:

>723_bases
GTGCAGGGGCTCTTCCTATTACGGTCGGCCATCGCAGTGACTATCGCCATCGCACTGGTGTTGTTCATGGGTGTCCCGCG
GGCCGCGGCCGACGATAACCCGCTCGGTCCCAATGTCGGTACCGCCTTCCTCAACGCTCTCGGACTGAACCCGACCGGCG
GCCAATACGACCCCACGCTGCCCTTCGCCGGCCCGAGCCAGGGCGCGGATCCCGCAAAGATCATGAACGGCGTGATGGGG
GTCGGTCAGACCGCGTTGGGAGCGCTGGGGATCGGTGGAAACAGCGCGTCCGCGGGCGCGGGGCGCCCGCTGGTCTACGG
CCGTGCCGCCGTGGAGCGCGTGATTCAGCGTGGCGGGACCCAACTCGGGGTGCCGTACTCCTGGGGCGGTGGCACAGTGC
GCGGGCCCAGCGGTGGTGTCGACTATGACTCGGGCAAGGTCGGCTACGACTGCTCCGGGTTCACCATGTTTTCGTACGCG
GCCGCGGGAGTGAAGCTGCCGAAGTACTCGGGAGACCAGTACAACGCCGGCCAAAAGGTCCCGGTCGCGCAGGCAAAACG
TGGTGACCTTCTGTTCTACGGTCCCGGCGGTTCTCAGCACGTGGTGATCTACCTCGGCAATGGCCAGATGCTGGAGGCCA
GCGGCAGTGCGGGCAAGGTGACCGTGTCCCCGGTGCGCACGGGCGGCATGACTCCTTACGCCGTTCGTATCATCGCGTGG
TAG

Upstream 100 bases:

>100_bases
ATGTGGTCAAGGTGTCGCCGGTCCGCACCAGTGGCATGACGCCCTATGTAACCCGGATGATTGAGTGGTAGAAGTGGTGA
AGGCGGCAAAGGTGCTAAAA

Downstream 100 bases:

>100_bases
CTCTTCTGATCCTTCGGGTGAGCTAGAAGGGCGCGCCAGCGAACGGGTACGTGGACCAAACCCCGGGATGCTGGAATAGT
GGACCGAAGGCGCCGCCCAG

Product: invasion protein Inv2

Products: NA

Alternate protein names: Invasion-associated protein [H]

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MQGLFLLRSAIAVTIAIALVLFMGVPRAAADDNPLGPNVGTAFLNALGLNPTGGQYDPTLPFAGPSQGADPAKIMNGVMG
VGQTALGALGIGGNSASAGAGRPLVYGRAAVERVIQRGGTQLGVPYSWGGGTVRGPSGGVDYDSGKVGYDCSGFTMFSYA
AAGVKLPKYSGDQYNAGQKVPVAQAKRGDLLFYGPGGSQHVVIYLGNGQMLEASGSAGKVTVSPVRTGGMTPYAVRIIAW

Sequences:

>Translated_240_residues
MQGLFLLRSAIAVTIAIALVLFMGVPRAAADDNPLGPNVGTAFLNALGLNPTGGQYDPTLPFAGPSQGADPAKIMNGVMG
VGQTALGALGIGGNSASAGAGRPLVYGRAAVERVIQRGGTQLGVPYSWGGGTVRGPSGGVDYDSGKVGYDCSGFTMFSYA
AAGVKLPKYSGDQYNAGQKVPVAQAKRGDLLFYGPGGSQHVVIYLGNGQMLEASGSAGKVTVSPVRTGGMTPYAVRIIAW
>Mature_240_residues
MQGLFLLRSAIAVTIAIALVLFMGVPRAAADDNPLGPNVGTAFLNALGLNPTGGQYDPTLPFAGPSQGADPAKIMNGVMG
VGQTALGALGIGGNSASAGAGRPLVYGRAAVERVIQRGGTQLGVPYSWGGGTVRGPSGGVDYDSGKVGYDCSGFTMFSYA
AAGVKLPKYSGDQYNAGQKVPVAQAKRGDLLFYGPGGSQHVVIYLGNGQMLEASGSAGKVTVSPVRTGGMTPYAVRIIAW

Specific function: This major extracellular protein may be involved in the invasion of non-professional phagocytic cells by Listeria [H]

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 LysM repeats [H]

Homologues:

Organism=Escherichia coli, GI1787944, Length=140, Percent_Identity=25, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064
- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR003646
- InterPro:   IPR013247 [H]

Pfam domain/function: PF01476 LysM; PF00877 NLPC_P60; PF08239 SH3_3 [H]

EC number: NA

Molecular weight: Translated: 24256; Mature: 24256

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGLFLLRSAIAVTIAIALVLFMGVPRAAADDNPLGPNVGTAFLNALGLNPTGGQYDPTL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
PFAGPSQGADPAKIMNGVMGVGQTALGALGIGGNSASAGAGRPLVYGRAAVERVIQRGGT
CCCCCCCCCCHHHHHHHHHHCCCHHHHEEECCCCCCCCCCCCCEEECHHHHHHHHHHCCC
QLGVPYSWGGGTVRGPSGGVDYDSGKVGYDCSGFTMFSYAAAGVKLPKYSGDQYNAGQKV
EECCEEECCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCEECCCCCCCCCCCCCCC
PVAQAKRGDLLFYGPGGSQHVVIYLGNGQMLEASGSAGKVTVSPVRTGGMTPYAVRIIAW
CCCCCCCCCEEEECCCCCCEEEEEECCCEEEEECCCCCEEEEEEECCCCCCCEEEEEEEC
>Mature Secondary Structure
MQGLFLLRSAIAVTIAIALVLFMGVPRAAADDNPLGPNVGTAFLNALGLNPTGGQYDPTL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
PFAGPSQGADPAKIMNGVMGVGQTALGALGIGGNSASAGAGRPLVYGRAAVERVIQRGGT
CCCCCCCCCCHHHHHHHHHHCCCHHHHEEECCCCCCCCCCCCCEEECHHHHHHHHHHCCC
QLGVPYSWGGGTVRGPSGGVDYDSGKVGYDCSGFTMFSYAAAGVKLPKYSGDQYNAGQKV
EECCEEECCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCEECCCCCCCCCCCCCCC
PVAQAKRGDLLFYGPGGSQHVVIYLGNGQMLEASGSAGKVTVSPVRTGGMTPYAVRIIAW
CCCCCCCCCEEEECCCCCCEEEEEECCCEEEEECCCCCEEEEEEECCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1514809; 1459966 [H]