| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629767
Identifier: 169629767
GI number: 169629767
Start: 2725104
End: 2725892
Strand: Reverse
Name: 169629767
Synonym: MAB_2682c
Alternate gene names: NA
Gene position: 2725892-2725104 (Counterclockwise)
Preceding gene: 169629768
Following gene: 169629765
Centisome position: 53.8
GC content: 66.92
Gene sequence:
>789_bases ATGAGCGCGAGCGAAGAGCCGCAGGTTTCGATGAGCGTGAGCGAAGAGCCGCAGGTTCCGATGAGCGTGAGCGAAGAGCC GCAGGTTCCGATGAGCGTGAGCGAAGAGCCGCAGGTTCCGATGAGCGTGAGCGGGCAACCGGTGGCTGTGGCGAGCCGGG AGGGCGCGCCGCGCTTTTCGCACATTGGCGCGGCAGCGATCGTGTTCGGCGGATTGGCCGCGACCGGTGTGCTGGTGGGA GTGCTCTGGAGCTTTCTGGCCCCCGGTGTGCACGGGGCCATCGCTGACACGCGGGACAATGGTCGAGTATTTGTGCACTT GGGCAACCAGGCCGACAACTTCTTCATCGGCACCACCCTGCTTGTGGGGATGGCCGCGGTGGTCGCGGTGATCGCGGCGG CGGCGGCATGGCAGTGGCGGGCGCACCGCGGCCCGATGATGGTGGGCGCGCTCACCCTGGGATCCTTGGCCTGCTCGGCG GTGGCGGCGGGAGTCGGCGCCGTCCTGGTCCGGTTGCGTTACGGCGCATTGGATATCGCGGGCGCCTCACTGGATGCGGG ACATCGGATCAAGTATGTCGTCCAGGCTCCTGCGGTGTTCTACGGTCATACGGAAGCTCAGATAGCCGTCACGCTGGCGC TGGCACCCTGCCTGGCCGCGGTGGTCTATATGTTCTGCGTAGTTGCTTGCGCCCGTGACGATCTGGATGCCTGGCCGCCT GCGCCGGTACCCGAATACCGGGCGCCCGTGCTCGTGCCGCCGACAGAAGGCGCTAATTCGACGGCCTAG
Upstream 100 bases:
>100_bases CGGCGTGTGGACGACGAATGATCGTCCAGGTGCGGCCGGATGGGTGGCACGCGAAGTGTTCCCGGCACGGCGAGGTGGAC TCCAAGCAGCTCGAGCAGCG
Downstream 100 bases:
>100_bases CTTGATCGAGCCGCAGTGAACGTGCAGTACTCCGCGCCGAACGGGTGACCGCCGCCTCGTCCCAGGTGATGTCTCCGGCA CCCGGCATGGCCGCGGTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MSASEEPQVSMSVSEEPQVPMSVSEEPQVPMSVSEEPQVPMSVSGQPVAVASREGAPRFSHIGAAAIVFGGLAATGVLVG VLWSFLAPGVHGAIADTRDNGRVFVHLGNQADNFFIGTTLLVGMAAVVAVIAAAAAWQWRAHRGPMMVGALTLGSLACSA VAAGVGAVLVRLRYGALDIAGASLDAGHRIKYVVQAPAVFYGHTEAQIAVTLALAPCLAAVVYMFCVVACARDDLDAWPP APVPEYRAPVLVPPTEGANSTA
Sequences:
>Translated_262_residues MSASEEPQVSMSVSEEPQVPMSVSEEPQVPMSVSEEPQVPMSVSGQPVAVASREGAPRFSHIGAAAIVFGGLAATGVLVG VLWSFLAPGVHGAIADTRDNGRVFVHLGNQADNFFIGTTLLVGMAAVVAVIAAAAAWQWRAHRGPMMVGALTLGSLACSA VAAGVGAVLVRLRYGALDIAGASLDAGHRIKYVVQAPAVFYGHTEAQIAVTLALAPCLAAVVYMFCVVACARDDLDAWPP APVPEYRAPVLVPPTEGANSTA >Mature_261_residues SASEEPQVSMSVSEEPQVPMSVSEEPQVPMSVSEEPQVPMSVSGQPVAVASREGAPRFSHIGAAAIVFGGLAATGVLVGV LWSFLAPGVHGAIADTRDNGRVFVHLGNQADNFFIGTTLLVGMAAVVAVIAAAAAWQWRAHRGPMMVGALTLGSLACSAV AAGVGAVLVRLRYGALDIAGASLDAGHRIKYVVQAPAVFYGHTEAQIAVTLALAPCLAAVVYMFCVVACARDDLDAWPPA PVPEYRAPVLVPPTEGANSTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML1222 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021213 [H]
Pfam domain/function: PF10821 DUF2567 [H]
EC number: NA
Molecular weight: Translated: 26894; Mature: 26763
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASEEPQVSMSVSEEPQVPMSVSEEPQVPMSVSEEPQVPMSVSGQPVAVASREGAPRFS CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHH HIGAAAIVFGGLAATGVLVGVLWSFLAPGVHGAIADTRDNGRVFVHLGNQADNFFIGTTL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCEEEEEECCCCCCEEHHHHH LVGMAAVVAVIAAAAAWQWRAHRGPMMVGALTLGSLACSAVAAGVGAVLVRLRYGALDIA HHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEC GASLDAGHRIKYVVQAPAVFYGHTEAQIAVTLALAPCLAAVVYMFCVVACARDDLDAWPP CCCCCCCCEEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC APVPEYRAPVLVPPTEGANSTA CCCCCCCCCEEECCCCCCCCCC >Mature Secondary Structure SASEEPQVSMSVSEEPQVPMSVSEEPQVPMSVSEEPQVPMSVSGQPVAVASREGAPRFS CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHH HIGAAAIVFGGLAATGVLVGVLWSFLAPGVHGAIADTRDNGRVFVHLGNQADNFFIGTTL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCEEEEEECCCCCCEEHHHHH LVGMAAVVAVIAAAAAWQWRAHRGPMMVGALTLGSLACSAVAAGVGAVLVRLRYGALDIA HHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEC GASLDAGHRIKYVVQAPAVFYGHTEAQIAVTLALAPCLAAVVYMFCVVACARDDLDAWPP CCCCCCCCEEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC APVPEYRAPVLVPPTEGANSTA CCCCCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]