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The map label for this gene is uidR [C]

Identifier: 169629762

GI number: 169629762

Start: 2718913

End: 2719449

Strand: Reverse

Name: uidR [C]

Synonym: MAB_2677c

Alternate gene names: 169629762

Gene position: 2719449-2718913 (Counterclockwise)

Preceding gene: 169629765

Following gene: 169629759

Centisome position: 53.67

GC content: 60.89

Gene sequence:

>537_bases
ATGCTCTCCGACGCGGCCGTCGCACCAGGCACCAGGGAGCGCATCCAGACTGTTGCGCGCGACCTGTTCGCCGAACGCGG
GTTGCGCAATACCAGCCTGCAGGACATCGCAAGCCGTCTTAAGATCACCAAACCCGCTCTGTACTACCACTTCTCGTCGC
GCGATGAGCTGGTTCGGAGCATAGTCCAGCCGATGGTGGATGACCTGCAAACGTTTCTGGCGACGAATAACGCAGGGGAT
AGGCGTCAACTGCTCGAGGACTACTTCGATGTGTTATGGACTCACCGGGTTGTCTTGGGCATCATCGTGCGCGACTTGGC
TGCCCTGGGGCAACTCGAATTGGGTGAATGGATGATGGGATGGCGCCGCAGGCTGATCGTCCTGCTTGCGGGTGGTAAAC
CTTCGGCGGCGCAAATGATCCAGGCAACTGTGGCCCTCGGCGGATTGTCGGATTGCACCATCGAATACGCGGACCGTCCG
CACCGACAGGTGAAGAAGACGGCGGTAGCGGCGGCCATCGCCGCGCTGGAGAGCTGA

Upstream 100 bases:

>100_bases
CCCGAAATCAACACCCGCATGGCATCTCCTTACTTAACGATAGGTAAGTAGAGCGAGCGTACTGCTTACCGACCGGAAAG
TCAGGCGTTAAGATCGGCAG

Downstream 100 bases:

>100_bases
GATTCGCTAGAGGGAACGTCCGCCGAGCACCTTGGCGCCGATCCAACCCAGTTTGAGCAGGCCGAGATAGGTCGACGGTT
TGAATGCCAGTGGCCAGCTC

Product: putative trancscriptional regulator,TetR

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Trancscriptional Regulator TetR; Gamma-Butyrolactone Autoregulator Receptor; TetR-Family Regulator; TetR Family Regulator; Transcriptional Regulator TetR Family Protein; TetR-Family Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MLSDAAVAPGTRERIQTVARDLFAERGLRNTSLQDIASRLKITKPALYYHFSSRDELVRSIVQPMVDDLQTFLATNNAGD
RRQLLEDYFDVLWTHRVVLGIIVRDLAALGQLELGEWMMGWRRRLIVLLAGGKPSAAQMIQATVALGGLSDCTIEYADRP
HRQVKKTAVAAAIAALES

Sequences:

>Translated_178_residues
MLSDAAVAPGTRERIQTVARDLFAERGLRNTSLQDIASRLKITKPALYYHFSSRDELVRSIVQPMVDDLQTFLATNNAGD
RRQLLEDYFDVLWTHRVVLGIIVRDLAALGQLELGEWMMGWRRRLIVLLAGGKPSAAQMIQATVALGGLSDCTIEYADRP
HRQVKKTAVAAAIAALES
>Mature_178_residues
MLSDAAVAPGTRERIQTVARDLFAERGLRNTSLQDIASRLKITKPALYYHFSSRDELVRSIVQPMVDDLQTFLATNNAGD
RRQLLEDYFDVLWTHRVVLGIIVRDLAALGQLELGEWMMGWRRRLIVLLAGGKPSAAQMIQATVALGGLSDCTIEYADRP
HRQVKKTAVAAAIAALES

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19760; Mature: 19760

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSDAAVAPGTRERIQTVARDLFAERGLRNTSLQDIASRLKITKPALYYHFSSRDELVRS
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHEEECCHHHHHHH
IVQPMVDDLQTFLATNNAGDRRQLLEDYFDVLWTHRVVLGIIVRDLAALGQLELGEWMMG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
WRRRLIVLLAGGKPSAAQMIQATVALGGLSDCTIEYADRPHRQVKKTAVAAAIAALES
HHHHHEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLSDAAVAPGTRERIQTVARDLFAERGLRNTSLQDIASRLKITKPALYYHFSSRDELVRS
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHEEECCHHHHHHH
IVQPMVDDLQTFLATNNAGDRRQLLEDYFDVLWTHRVVLGIIVRDLAALGQLELGEWMMG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
WRRRLIVLLAGGKPSAAQMIQATVALGGLSDCTIEYADRPHRQVKKTAVAAAIAALES
HHHHHEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA