| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is priA
Identifier: 169629751
GI number: 169629751
Start: 2708260
End: 2708991
Strand: Reverse
Name: priA
Synonym: MAB_2666c
Alternate gene names: 169629751
Gene position: 2708991-2708260 (Counterclockwise)
Preceding gene: 169629752
Following gene: 169629750
Centisome position: 53.46
GC content: 64.48
Gene sequence:
>732_bases TTGAGTCTCGTTCTATTACCGGCGGTTGATGTCGCGGACGGTCAGGCTGTACGCCTGGTGCAGGGCAAGGCGGGCAGTGA AACCACGTACGGTTCGCCGCGTGACGCGGCACTGGCGTGGCAGAACGACGGTGCCGAGTGGGTACATCTGGTGGACCTGG ATGCGGCCTTTGGCCGTGGCTCAAATCGTGAGCTGCTGGCGCAGGTCGTCGGTGAGCTCGACGTCAAGGTGGAGCTCTCG GGTGGTATCCGTGACGATGAGGCGTTGACCGCGGCGCTCGCCACCGGTTGCGCACGAGTCAATCTCGGTACCGCTGCGCT GGAGGACCCCGAATGGTGCGCTTCGGCGATCGCCCGGCACGGTGAACGCGTGGCTGTGGGTCTGGATGTCGAAATTGTCG AGGGCGCACACCGTCTACGCGGCCGTGGCTGGGTGAGTGACGGCGGAGATCTCTGGGAGGTGCTCGAACGTCTGCGTGCA CAGGGATGTTCGCGCTACGTGGTCACGGATGTAACCAAGGACGGTACCCTGACCGGGCCAAATCTTGAGCTGCTGGCACA GGTCGCCGGTGTGGCCAACGCTCCGGTCATTGCCTCGGGCGGGGTGTCGAGTCTGGATGATCTGCGTGCCATCGCGGAAT TGACCGGCGCCGGTGTCGAGGGCGCGATCGTCGGAAAGGCCCTTTACGCAGGCCGTTTCACCCTGCCCGATGCGATAGCA GCCGTTTCCTGA
Upstream 100 bases:
>100_bases CGGCGGTGGAGAATGGGCCACTTGCTGCCACACAGTTCCATCCGGAAAAGAGTGGTGACGCGGGGGCCGTGTTGTTGAGC AATTGGGTGAAGGGAATCTC
Downstream 100 bases:
>100_bases GATGACCACGACCGCGGAACTGGAAGCTCTGGTGCGCGAGGCGTCCGTGATTCTGGATGCGGCGGCCCAGCGTTTCGTGG CCGGTCATGGGGCCGAGGGT
Product: phosphoribosyl isomerase A
Products: NA
Alternate protein names: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; N-(5'-phosphoribosyl)anthranilate isomerase; PRAI; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MSLVLLPAVDVADGQAVRLVQGKAGSETTYGSPRDAALAWQNDGAEWVHLVDLDAAFGRGSNRELLAQVVGELDVKVELS GGIRDDEALTAALATGCARVNLGTAALEDPEWCASAIARHGERVAVGLDVEIVEGAHRLRGRGWVSDGGDLWEVLERLRA QGCSRYVVTDVTKDGTLTGPNLELLAQVAGVANAPVIASGGVSSLDDLRAIAELTGAGVEGAIVGKALYAGRFTLPDAIA AVS
Sequences:
>Translated_243_residues MSLVLLPAVDVADGQAVRLVQGKAGSETTYGSPRDAALAWQNDGAEWVHLVDLDAAFGRGSNRELLAQVVGELDVKVELS GGIRDDEALTAALATGCARVNLGTAALEDPEWCASAIARHGERVAVGLDVEIVEGAHRLRGRGWVSDGGDLWEVLERLRA QGCSRYVVTDVTKDGTLTGPNLELLAQVAGVANAPVIASGGVSSLDDLRAIAELTGAGVEGAIVGKALYAGRFTLPDAIA AVS >Mature_242_residues SLVLLPAVDVADGQAVRLVQGKAGSETTYGSPRDAALAWQNDGAEWVHLVDLDAAFGRGSNRELLAQVVGELDVKVELSG GIRDDEALTAALATGCARVNLGTAALEDPEWCASAIARHGERVAVGLDVEIVEGAHRLRGRGWVSDGGDLWEVLERLRAQ GCSRYVVTDVTKDGTLTGPNLELLAQVAGVANAPVIASGGVSSLDDLRAIAELTGAGVEGAIVGKALYAGRFTLPDAIAA VS
Specific function: Involved in both the histidine and tryptophan biosynthetic pathways
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=247, Percent_Identity=36.8421052631579, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1788336, Length=234, Percent_Identity=24.7863247863248, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_MYCA9 (B1MBX5)
Other databases:
- EMBL: CU458896 - RefSeq: YP_001703400.1 - ProteinModelPortal: B1MBX5 - SMR: B1MBX5 - EnsemblBacteria: EBMYCT00000006309 - GeneID: 5965175 - GenomeReviews: CU458896_GR - KEGG: mab:MAB_2666c - GeneTree: EBGT00050000015857 - HOGENOM: HBG541613 - OMA: CARYVVT - ProtClustDB: PRK14024 - BioCyc: MABS561007:MAB_2666C-MONOMER - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR010188 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR01919
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16; =5.3.1.24
Molecular weight: Translated: 25075; Mature: 24944
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: ACT_SITE 10-10 ACT_SITE 129-129
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLVLLPAVDVADGQAVRLVQGKAGSETTYGSPRDAALAWQNDGAEWVHLVDLDAAFGRG CCEEEEECEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEHHHHCCC SNRELLAQVVGELDVKVELSGGIRDDEALTAALATGCARVNLGTAALEDPEWCASAIARH CCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHC GERVAVGLDVEIVEGAHRLRGRGWVSDGGDLWEVLERLRAQGCSRYVVTDVTKDGTLTGP CCEEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC NLELLAQVAGVANAPVIASGGVSSLDDLRAIAELTGAGVEGAIVGKALYAGRFTLPDAIA CHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHH AVS HCC >Mature Secondary Structure SLVLLPAVDVADGQAVRLVQGKAGSETTYGSPRDAALAWQNDGAEWVHLVDLDAAFGRG CEEEEECEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEHHHHCCC SNRELLAQVVGELDVKVELSGGIRDDEALTAALATGCARVNLGTAALEDPEWCASAIARH CCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHC GERVAVGLDVEIVEGAHRLRGRGWVSDGGDLWEVLERLRAQGCSRYVVTDVTKDGTLTGP CCEEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC NLELLAQVAGVANAPVIASGGVSSLDDLRAIAELTGAGVEGAIVGKALYAGRFTLPDAIA CHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHH AVS HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA