| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is lip2 [H]
Identifier: 169629740
GI number: 169629740
Start: 2698267
End: 2699316
Strand: Direct
Name: lip2 [H]
Synonym: MAB_2655
Alternate gene names: 169629740
Gene position: 2698267-2699316 (Clockwise)
Preceding gene: 169629739
Following gene: 169629741
Centisome position: 53.25
GC content: 64.67
Gene sequence:
>1050_bases ATGACGAGCATCACTGCGGAGGCACCGCCACGCCTGACCGTCTCCGAACTGATCCAGCGCGCCGCGTTCACAACACTGGA CCGAATTCCGAAAGTTGTTCTTCGCCAGCTTATCCCACCGGTAGTCAACGCGGATGGCGATGTCATGGCACCGGAGATCG CATTGCTCATGCGATTCGCCGCCGCAGCACCTGACTTCAGCGACTGTGGCGTCGCCGAAGCGAGGGCCATCATCGAAACC GACTCCAGAGTGTTCGCGGACACCTCCGAGACCGCTGACGCAGACTCCGGCATCGTGCTCCCCAGCGGCATCCGAGCCAG CCTCTACCGCCCAAAGACACAGTCGAACGGGTTGGTGCTGTTCCTGCACGGTGGAGGTTTCGTCCTCGGCAGCCGCACGG CATACGACTCCCCCGCCCGGCTCATCGCGGCCCACGCCGGCGTCAACGTCCTGTCGATCGAGTATCGACTAGCCCCCGAG GCCCCCTTCCCCGCCGCGCTCGAGGATGCCTCGGAAGCATGGCGATTCGCAGTCGGCCACAGCTCCGACTGGGGCATCGA CCCGGCCCGTATCGTGCTGCTCGGCGACAGTGCCGGCGCAAACCTGTGCGCAGTGCTCTCGAACCAACTCCGCGATGAGG AGATCCGGCCCAGAATGCAGGTATTGATGTACCCCGTCGTCGATGCCGTAGGTGAGTACCGTTCACGCGAGGAGTTCGCC GACAACCCGGCACTCTCGGCCAAGCAGATCGAATGGCTGTCCGCACTGTATGTGCCCGACGCGAGCGACCGATCCGACCC GCGCGTGTCACCGATGCTTGCCGACGATCTGTCCGGGGCGCCGGCGACGCTCATCACCGTCGCCGGTTTCGACCCGCTGC GCGACGAGGCAATCGCCTACGCCAAGCGGCTCAAGGATTCCGGGGTATCCACGCGACTGCTACGCGAAGGCAGCCTCGTA CACGGCTACATCTCCATGACACAGATCAGCCAGGCCGCACGCAATGCCGTCCAACGTGTCGCCGCCGCCATCAACCACGC AGTGCGCTAA
Upstream 100 bases:
>100_bases ACTTCAGTTCGCGGTTGGAGCGCGAACTGAAGGACAGCGGCAGCAACAGTCCTGATCGTCGCACCCAGATCAGCCGAGCA TCTTCCGGAGGCGCGACGTC
Downstream 100 bases:
>100_bases CGGTTACCGGCCCCGCCCACACCTATATCGAAAGTCTGAGCTTTGATCGTGTCCACAAACCGGCGAGCACTGCTTCTAGG CGGGCTTGCGTTCACGGCCG
Product: lipase/esterase (LipN)
Products: NA
Alternate protein names: Triacylglycerol lipase [H]
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MTSITAEAPPRLTVSELIQRAAFTTLDRIPKVVLRQLIPPVVNADGDVMAPEIALLMRFAAAAPDFSDCGVAEARAIIET DSRVFADTSETADADSGIVLPSGIRASLYRPKTQSNGLVLFLHGGGFVLGSRTAYDSPARLIAAHAGVNVLSIEYRLAPE APFPAALEDASEAWRFAVGHSSDWGIDPARIVLLGDSAGANLCAVLSNQLRDEEIRPRMQVLMYPVVDAVGEYRSREEFA DNPALSAKQIEWLSALYVPDASDRSDPRVSPMLADDLSGAPATLITVAGFDPLRDEAIAYAKRLKDSGVSTRLLREGSLV HGYISMTQISQAARNAVQRVAAAINHAVR
Sequences:
>Translated_349_residues MTSITAEAPPRLTVSELIQRAAFTTLDRIPKVVLRQLIPPVVNADGDVMAPEIALLMRFAAAAPDFSDCGVAEARAIIET DSRVFADTSETADADSGIVLPSGIRASLYRPKTQSNGLVLFLHGGGFVLGSRTAYDSPARLIAAHAGVNVLSIEYRLAPE APFPAALEDASEAWRFAVGHSSDWGIDPARIVLLGDSAGANLCAVLSNQLRDEEIRPRMQVLMYPVVDAVGEYRSREEFA DNPALSAKQIEWLSALYVPDASDRSDPRVSPMLADDLSGAPATLITVAGFDPLRDEAIAYAKRLKDSGVSTRLLREGSLV HGYISMTQISQAARNAVQRVAAAINHAVR >Mature_348_residues TSITAEAPPRLTVSELIQRAAFTTLDRIPKVVLRQLIPPVVNADGDVMAPEIALLMRFAAAAPDFSDCGVAEARAIIETD SRVFADTSETADADSGIVLPSGIRASLYRPKTQSNGLVLFLHGGGFVLGSRTAYDSPARLIAAHAGVNVLSIEYRLAPEA PFPAALEDASEAWRFAVGHSSDWGIDPARIVLLGDSAGANLCAVLSNQLRDEEIRPRMQVLMYPVVDAVGEYRSREEFAD NPALSAKQIEWLSALYVPDASDRSDPRVSPMLADDLSGAPATLITVAGFDPLRDEAIAYAKRLKDSGVSTRLLREGSLVH GYISMTQISQAARNAVQRVAAAINHAVR
Specific function: Has An Esterase Activity. Triacetyl Glycerol (Triacetin) Is A Substrate Of The Enzyme. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Homo sapiens, GI206597554, Length=290, Percent_Identity=28.6206896551724, Blast_Score=99, Evalue=7e-21, Organism=Homo sapiens, GI68299767, Length=306, Percent_Identity=27.4509803921569, Blast_Score=99, Evalue=9e-21, Organism=Homo sapiens, GI157041239, Length=309, Percent_Identity=24.9190938511327, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI68051721, Length=276, Percent_Identity=26.4492753623188, Blast_Score=85, Evalue=8e-17, Organism=Homo sapiens, GI21328446, Length=131, Percent_Identity=37.4045801526718, Blast_Score=82, Evalue=8e-16, Organism=Homo sapiens, GI61966717, Length=285, Percent_Identity=26.6666666666667, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI226423947, Length=284, Percent_Identity=26.056338028169, Blast_Score=77, Evalue=2e-14, Organism=Escherichia coli, GI1786682, Length=274, Percent_Identity=25.9124087591241, Blast_Score=93, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17567059, Length=272, Percent_Identity=29.4117647058824, Blast_Score=110, Evalue=7e-25, Organism=Caenorhabditis elegans, GI72001146, Length=135, Percent_Identity=37.7777777777778, Blast_Score=98, Evalue=6e-21, Organism=Caenorhabditis elegans, GI71996133, Length=134, Percent_Identity=38.8059701492537, Blast_Score=94, Evalue=8e-20, Organism=Caenorhabditis elegans, GI17540028, Length=131, Percent_Identity=39.6946564885496, Blast_Score=92, Evalue=6e-19, Organism=Drosophila melanogaster, GI24656084, Length=104, Percent_Identity=36.5384615384615, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24656076, Length=104, Percent_Identity=36.5384615384615, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI20130169, Length=104, Percent_Identity=36.5384615384615, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 37389; Mature: 37258
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSITAEAPPRLTVSELIQRAAFTTLDRIPKVVLRQLIPPVVNADGDVMAPEIALLMRFA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEHHHHHHHHHHH AAAPDFSDCGVAEARAIIETDSRVFADTSETADADSGIVLPSGIRASLYRPKTQSNGLVL HCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCEECCCCCCHHEECCCCCCCCEEE FLHGGGFVLGSRTAYDSPARLIAAHAGVNVLSIEYRLAPEAPFPAALEDASEAWRFAVGH EEECCCEEEECCCCCCCHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHHHHHEEECCC SSDWGIDPARIVLLGDSAGANLCAVLSNQLRDEEIRPRMQVLMYPVVDAVGEYRSREEFA CCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC DNPALSAKQIEWLSALYVPDASDRSDPRVSPMLADDLSGAPATLITVAGFDPLRDEAIAY CCCCCCHHHHHHHHHEECCCCCCCCCCCCCCHHHHCCCCCCEEEEEEECCCHHHHHHHHH AKRLKDSGVSTRLLREGSLVHGYISMTQISQAARNAVQRVAAAINHAVR HHHHHHCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TSITAEAPPRLTVSELIQRAAFTTLDRIPKVVLRQLIPPVVNADGDVMAPEIALLMRFA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEHHHHHHHHHHH AAAPDFSDCGVAEARAIIETDSRVFADTSETADADSGIVLPSGIRASLYRPKTQSNGLVL HCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCEECCCCCCHHEECCCCCCCCEEE FLHGGGFVLGSRTAYDSPARLIAAHAGVNVLSIEYRLAPEAPFPAALEDASEAWRFAVGH EEECCCEEEECCCCCCCHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHHHHHEEECCC SSDWGIDPARIVLLGDSAGANLCAVLSNQLRDEEIRPRMQVLMYPVVDAVGEYRSREEFA CCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC DNPALSAKQIEWLSALYVPDASDRSDPRVSPMLADDLSGAPATLITVAGFDPLRDEAIAY CCCCCCHHHHHHHHHEECCCCCCCCCCCCCCHHHHCCCCCCEEEEEEECCCHHHHHHHHH AKRLKDSGVSTRLLREGSLVHGYISMTQISQAARNAVQRVAAAINHAVR HHHHHHCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1907455 [H]