| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629691
Identifier: 169629691
GI number: 169629691
Start: 2642012
End: 2643814
Strand: Reverse
Name: 169629691
Synonym: MAB_2605c
Alternate gene names: NA
Gene position: 2643814-2642012 (Counterclockwise)
Preceding gene: 169629692
Following gene: 169629690
Centisome position: 52.18
GC content: 62.95
Gene sequence:
>1803_bases ATGGTTCCGTGCAGTGATGCCCAGTTCGACACCGTCATCCGAAATGGGCGATGGTTCGACGGGACGGGGGCGCCGTCCGC CATACGTAACATCGGTATCAAGGATGGCCATGTGGCCGCGGTCTCGGCCGACGACCTCGACGAGACACACTGTCCGAACA TCATTGACGCCAGCGGAAAGTGGGTGCTGCCTGGGCTAGTGGACATCCACACTCACTACGACATCGAAGTGCTGGCCGCA CCGGCGTTGTCGGAGTCGGTGCGTCATGGCGTGACCACGGTCTTGCTTGGTTCTTGCTCCCTGTCGGTCGTACACGTCGA CGGCGTCGATGCCGGGGACATCTTCGGCAGGGTGGAGGCGATACCGCGTGACCACGTGATTCAGGTCGTCGACCGGTACA AGACCTGGACGAATGCCGGTCAATACGTCGCAGCGTTGGAATCGTTGCCTCTGGGGCCGAATGTTGCTGCCTTCCTTGGG CATTCGGATATACGCGCCGCTGCGATGGGGTTGGATCGCGCGACCCGAAAGGATGAGCGCCCGACGGCCGCCGAACAGGC GCAAATGGATCGGTGGCTGACCGAGGCCCTGGATGCCGGATTCGTCGGCATGTCCTCTCAGCAGCTGTTGTTCGACAAGC TCGATGGCGACGTCTGCCGGTCCCGCACCTTGCCTTCCACCTATGCGAAACCTCGCGAGCTCCGTAGGCTGAAAGCGCAA TTGCGCCAACGAAACCGGGTCCTGCAGTCCGGCCCAGACATTCAGAACCCGCTCAATGTGCTGTCGCAAGCCGTCCAGTC CCTCGGCATCCTGCGTAGGCCACTGTCCACGTCGCTGCTGTCGGCCGCGGACATCAAGGCCAACCCGTACGCGATCCGGG CGATGGGGCCGGTCGCAAGCCTGGTGAACAAGCTTGGCGGCAACTTCCGCTGGCAGCACCTTCCGGTGCCGTTCGAGGTG TATGCGGACGGCATCGACCTGGTCATTTTCGAAGAATTTGGTGCCGGGGCGGCCGCGTTGCACCTTCGGGACGAGGTCGA ACGGAATGAGCTACTGCGCGACGAGAAGTATCGGCGCAGGTTTCGCAAGGAGTACGAGAGCAAGTTCGGGGTACGCGTTT GGCACAGAGACTTCTTCGATGCCGAGATCGTTTCCTGCCCGGACAAGTCGGTTCTCGGTAAGTCTTTCGGGCAGGTCGGC ATGGATCGCGGGGGCCTGCACCCGGTGGACGCCTTCCTCGATTTGGTGCTCGAACACGGCACGGCAATGCGCTGGCGCAC CACCATTTCCAACCACAGGCCCGAGGTGCTCAAGCAGCTGGCACAAGACCCCGGTGTCCAGATCGGCTTCTCCGATGCCG GAGCCCACTTGAGGAACATGGCCTTCTACAACTTCGGGCTTCGGCTTCTGCGCCACGTACGTGAGGCGCAACAGGCCGGG AGACCGTTCATGACCGTCGAACAGGCAGTGCACCGCCTTACCGGCGAGCTGGCGGACTGGTATCAGATTGATGCCGGCCA CCTCCGAATCGGGGACCGCGCTGATCTTTTCGTGATCGACCCGGAGAAGCTCGACGCAACACTGACCGCGTATGCCGAGG AGTCGGTTGACGCCTACGGCGGGTTGTCCCGGATGGTCAATCGCAACGATGCGACCGTGAGCACGGTGTTGATCGGTGGA CAGCCGGTCGTGGTTGACGGACAACTCCGCGATCTCTTGGGCAAGCGGCGGACCGGTCGCTTCCTGCCGGCGGGGGCGAA GGCACGCGCGGTTCCCGTCGATACGGCGCCGGCGCCCCATTAG
Upstream 100 bases:
>100_bases CCCGATGATCCAGCGTCGCTTCGCCGCCACTTCCGGCGTTATGTCCTACCGGCGCTTCGTATTGCGCCCGTGAAATAGCT GTACCACAAGGAGAATCAGC
Downstream 100 bases:
>100_bases TACATCTAGATCTGAATACAGGACAAGCTGTACTATCGGCGCGTGGCGACGTTGGTTCATCGTGACGCCCTGACGAGATT CGGATGCGCGCTCTCCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 600; Mature: 600
Protein sequence:
>600_residues MVPCSDAQFDTVIRNGRWFDGTGAPSAIRNIGIKDGHVAAVSADDLDETHCPNIIDASGKWVLPGLVDIHTHYDIEVLAA PALSESVRHGVTTVLLGSCSLSVVHVDGVDAGDIFGRVEAIPRDHVIQVVDRYKTWTNAGQYVAALESLPLGPNVAAFLG HSDIRAAAMGLDRATRKDERPTAAEQAQMDRWLTEALDAGFVGMSSQQLLFDKLDGDVCRSRTLPSTYAKPRELRRLKAQ LRQRNRVLQSGPDIQNPLNVLSQAVQSLGILRRPLSTSLLSAADIKANPYAIRAMGPVASLVNKLGGNFRWQHLPVPFEV YADGIDLVIFEEFGAGAAALHLRDEVERNELLRDEKYRRRFRKEYESKFGVRVWHRDFFDAEIVSCPDKSVLGKSFGQVG MDRGGLHPVDAFLDLVLEHGTAMRWRTTISNHRPEVLKQLAQDPGVQIGFSDAGAHLRNMAFYNFGLRLLRHVREAQQAG RPFMTVEQAVHRLTGELADWYQIDAGHLRIGDRADLFVIDPEKLDATLTAYAEESVDAYGGLSRMVNRNDATVSTVLIGG QPVVVDGQLRDLLGKRRTGRFLPAGAKARAVPVDTAPAPH
Sequences:
>Translated_600_residues MVPCSDAQFDTVIRNGRWFDGTGAPSAIRNIGIKDGHVAAVSADDLDETHCPNIIDASGKWVLPGLVDIHTHYDIEVLAA PALSESVRHGVTTVLLGSCSLSVVHVDGVDAGDIFGRVEAIPRDHVIQVVDRYKTWTNAGQYVAALESLPLGPNVAAFLG HSDIRAAAMGLDRATRKDERPTAAEQAQMDRWLTEALDAGFVGMSSQQLLFDKLDGDVCRSRTLPSTYAKPRELRRLKAQ LRQRNRVLQSGPDIQNPLNVLSQAVQSLGILRRPLSTSLLSAADIKANPYAIRAMGPVASLVNKLGGNFRWQHLPVPFEV YADGIDLVIFEEFGAGAAALHLRDEVERNELLRDEKYRRRFRKEYESKFGVRVWHRDFFDAEIVSCPDKSVLGKSFGQVG MDRGGLHPVDAFLDLVLEHGTAMRWRTTISNHRPEVLKQLAQDPGVQIGFSDAGAHLRNMAFYNFGLRLLRHVREAQQAG RPFMTVEQAVHRLTGELADWYQIDAGHLRIGDRADLFVIDPEKLDATLTAYAEESVDAYGGLSRMVNRNDATVSTVLIGG QPVVVDGQLRDLLGKRRTGRFLPAGAKARAVPVDTAPAPH >Mature_600_residues MVPCSDAQFDTVIRNGRWFDGTGAPSAIRNIGIKDGHVAAVSADDLDETHCPNIIDASGKWVLPGLVDIHTHYDIEVLAA PALSESVRHGVTTVLLGSCSLSVVHVDGVDAGDIFGRVEAIPRDHVIQVVDRYKTWTNAGQYVAALESLPLGPNVAAFLG HSDIRAAAMGLDRATRKDERPTAAEQAQMDRWLTEALDAGFVGMSSQQLLFDKLDGDVCRSRTLPSTYAKPRELRRLKAQ LRQRNRVLQSGPDIQNPLNVLSQAVQSLGILRRPLSTSLLSAADIKANPYAIRAMGPVASLVNKLGGNFRWQHLPVPFEV YADGIDLVIFEEFGAGAAALHLRDEVERNELLRDEKYRRRFRKEYESKFGVRVWHRDFFDAEIVSCPDKSVLGKSFGQVG MDRGGLHPVDAFLDLVLEHGTAMRWRTTISNHRPEVLKQLAQDPGVQIGFSDAGAHLRNMAFYNFGLRLLRHVREAQQAG RPFMTVEQAVHRLTGELADWYQIDAGHLRIGDRADLFVIDPEKLDATLTAYAEESVDAYGGLSRMVNRNDATVSTVLIGG QPVVVDGQLRDLLGKRRTGRFLPAGAKARAVPVDTAPAPH
Specific function: Unknown
COG id: COG3653
COG function: function code Q; N-acyl-D-aspartate/D-glutamate deacylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N-acyl-D-amino-acid deacylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013108 - InterPro: IPR011059 [H]
Pfam domain/function: PF07969 Amidohydro_3 [H]
EC number: NA
Molecular weight: Translated: 66023; Mature: 66023
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPCSDAQFDTVIRNGRWFDGTGAPSAIRNIGIKDGHVAAVSADDLDETHCPNIIDASGK CCCCCCCCHHHHHHCCCEECCCCCCHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCC WVLPGLVDIHTHYDIEVLAAPALSESVRHGVTTVLLGSCSLSVVHVDGVDAGDIFGRVEA EECCCCEEECCCCCEEEEECCHHHHHHHHCHHHEEEECCCEEEEEECCCCHHHHHHHHHC IPRDHVIQVVDRYKTWTNAGQYVAALESLPLGPNVAAFLGHSDIRAAAMGLDRATRKDER CCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHCCHHHHHHHHCCHHHHCCCCC PTAAEQAQMDRWLTEALDAGFVGMSSQQLLFDKLDGDVCRSRTLPSTYAKPRELRRLKAQ CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHCCCCCHHHCCHHHHHHHHHH LRQRNRVLQSGPDIQNPLNVLSQAVQSLGILRRPLSTSLLSAADIKANPYAIRAMGPVAS HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEHHHHHH LVNKLGGNFRWQHLPVPFEVYADGIDLVIFEEFGAGAAALHLRDEVERNELLRDEKYRRR HHHHHCCCCEEEECCCCHHHHCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHH FRKEYESKFGVRVWHRDFFDAEIVSCPDKSVLGKSFGQVGMDRGGLHPVDAFLDLVLEHG HHHHHHHHCCEEEEHHCCCCCHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC TAMRWRTTISNHRPEVLKQLAQDPGVQIGFSDAGAHLRNMAFYNFGLRLLRHVREAQQAG CCEEEEHHHCCCCHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RPFMTVEQAVHRLTGELADWYQIDAGHLRIGDRADLFVIDPEKLDATLTAYAEESVDAYG CCCHHHHHHHHHHHHHHHHHEEECCCEEEECCCCCEEEECHHHHCHHHHHHHHHHHHHHH GLSRMVNRNDATVSTVLIGGQPVVVDGQLRDLLGKRRTGRFLPAGAKARAVPVDTAPAPH HHHHHHCCCCCEEEEEEECCEEEEECCHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCC >Mature Secondary Structure MVPCSDAQFDTVIRNGRWFDGTGAPSAIRNIGIKDGHVAAVSADDLDETHCPNIIDASGK CCCCCCCCHHHHHHCCCEECCCCCCHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCC WVLPGLVDIHTHYDIEVLAAPALSESVRHGVTTVLLGSCSLSVVHVDGVDAGDIFGRVEA EECCCCEEECCCCCEEEEECCHHHHHHHHCHHHEEEECCCEEEEEECCCCHHHHHHHHHC IPRDHVIQVVDRYKTWTNAGQYVAALESLPLGPNVAAFLGHSDIRAAAMGLDRATRKDER CCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHCCHHHHHHHHCCHHHHCCCCC PTAAEQAQMDRWLTEALDAGFVGMSSQQLLFDKLDGDVCRSRTLPSTYAKPRELRRLKAQ CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHCCCCCHHHCCHHHHHHHHHH LRQRNRVLQSGPDIQNPLNVLSQAVQSLGILRRPLSTSLLSAADIKANPYAIRAMGPVAS HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEHHHHHH LVNKLGGNFRWQHLPVPFEVYADGIDLVIFEEFGAGAAALHLRDEVERNELLRDEKYRRR HHHHHCCCCEEEECCCCHHHHCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHH FRKEYESKFGVRVWHRDFFDAEIVSCPDKSVLGKSFGQVGMDRGGLHPVDAFLDLVLEHG HHHHHHHHCCEEEEHHCCCCCHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC TAMRWRTTISNHRPEVLKQLAQDPGVQIGFSDAGAHLRNMAFYNFGLRLLRHVREAQQAG CCEEEEHHHCCCCHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RPFMTVEQAVHRLTGELADWYQIDAGHLRIGDRADLFVIDPEKLDATLTAYAEESVDAYG CCCHHHHHHHHHHHHHHHHHEEECCCEEEECCCCCEEEECHHHHCHHHHHHHHHHHHHHH GLSRMVNRNDATVSTVLIGGQPVVVDGQLRDLLGKRRTGRFLPAGAKARAVPVDTAPAPH HHHHHHCCCCCEEEEEEECCEEEEECCHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]