| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629689
Identifier: 169629689
GI number: 169629689
Start: 2640972
End: 2641649
Strand: Reverse
Name: 169629689
Synonym: MAB_2603c
Alternate gene names: NA
Gene position: 2641649-2640972 (Counterclockwise)
Preceding gene: 169629690
Following gene: 169629688
Centisome position: 52.13
GC content: 66.08
Gene sequence:
>678_bases ATGGTGCTCGCGCAACAACGGCGAGATGTGCTCAACCGCCGGATCCGGTTCTTTGTCGTTGCCACCATCGCCTACAACGT GATCGAGGCCATCGTGGCCCTCACCGAGGGTTCTCGGGTGTCGTCGACGGCCCTGATCGGCTTTGGCCTGGATTCGGTCA TCGAGGTGTCGTCCGCGGCGGCAGTGGCCTGGCAGTTCAGCGCCAAGGACCCAGAGACGCGGGAGAAGGTGGCCCTGCGG GTGATCGCATTCTCATTCTTCGCGCTGGCCGCCTACGTGGCCGTCGACTCGGTACGAGCGTTGGCGGGCCTCGACCAAGC CAGGCAGTCGACGGTGGGGATCGCCCTCGCGGCGGCCAGCCTCGTGATCATGCCTGCGCTGTCCTGGGCCCAGCGGCGAA CCGGCAGGGAATTGGGGTCCGCTTCGGCGGTCGCCGACTCCAAACAGACGTTGTTGTGCACGTATCTGTCGGCGGTTCTG CTCGCCGGGCTGTTGGTCAACTCTCTGTTCGCATGGTCGTGGGCTGACCCGATCGCAGCGCTGGCGATCGCGGTGATCGC GGTACGTGAAGGCATGAACGCCTGGCGCGGCGAATCCTGCTGCATGCCAGTGTTCGCCGCTGGAGCGTCGGAGTTGACCG GTAGCCAATGCGGCTGCTGCGAGCGTCGCGCGCCCTAG
Upstream 100 bases:
>100_bases ATGAGCTGGCGGACGAACGAATCGGACGAGCCCTGGATGACCTGGTGGACCTGGTGCTGACGGTGGATCCGTCGTACTGC CCAGTGGGCGAGGAATGCTG
Downstream 100 bases:
>100_bases TGGTCTACTATCTGCGTATCAATGCAGGTATGCAGGAGGAGTGTCCGATATGGAACAGCGGGATAGACCACCGCTGGGCG ATGAGCAGGTCGGGCTGGTG
Product: integral membrane protein
Products: NA
Alternate protein names: Integral Membrane Protein; Cation Efflux Family Protein; Co/Zn/Cd Cation Transporter-Like Protein; Co/Zn/Cd Cation Transporter; CoZn:Cd Cation Transporter; Conserved Membrane Protein; Co/Zn/Cd Cation Transporters-Like Protein
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MVLAQQRRDVLNRRIRFFVVATIAYNVIEAIVALTEGSRVSSTALIGFGLDSVIEVSSAAAVAWQFSAKDPETREKVALR VIAFSFFALAAYVAVDSVRALAGLDQARQSTVGIALAAASLVIMPALSWAQRRTGRELGSASAVADSKQTLLCTYLSAVL LAGLLVNSLFAWSWADPIAALAIAVIAVREGMNAWRGESCCMPVFAAGASELTGSQCGCCERRAP
Sequences:
>Translated_225_residues MVLAQQRRDVLNRRIRFFVVATIAYNVIEAIVALTEGSRVSSTALIGFGLDSVIEVSSAAAVAWQFSAKDPETREKVALR VIAFSFFALAAYVAVDSVRALAGLDQARQSTVGIALAAASLVIMPALSWAQRRTGRELGSASAVADSKQTLLCTYLSAVL LAGLLVNSLFAWSWADPIAALAIAVIAVREGMNAWRGESCCMPVFAAGASELTGSQCGCCERRAP >Mature_225_residues MVLAQQRRDVLNRRIRFFVVATIAYNVIEAIVALTEGSRVSSTALIGFGLDSVIEVSSAAAVAWQFSAKDPETREKVALR VIAFSFFALAAYVAVDSVRALAGLDQARQSTVGIALAAASLVIMPALSWAQRRTGRELGSASAVADSKQTLLCTYLSAVL LAGLLVNSLFAWSWADPIAALAIAVIAVREGMNAWRGESCCMPVFAAGASELTGSQCGCCERRAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23788; Mature: 23788
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLAQQRRDVLNRRIRFFVVATIAYNVIEAIVALTEGSRVSSTALIGFGLDSVIEVSSAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCHHHHHHHHHHH AVAWQFSAKDPETREKVALRVIAFSFFALAAYVAVDSVRALAGLDQARQSTVGIALAAAS HHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVIMPALSWAQRRTGRELGSASAVADSKQTLLCTYLSAVLLAGLLVNSLFAWSWADPIAA HHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH LAIAVIAVREGMNAWRGESCCMPVFAAGASELTGSQCGCCERRAP HHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHCCCCCCCCCCCCCC >Mature Secondary Structure MVLAQQRRDVLNRRIRFFVVATIAYNVIEAIVALTEGSRVSSTALIGFGLDSVIEVSSAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCHHHHHHHHHHH AVAWQFSAKDPETREKVALRVIAFSFFALAAYVAVDSVRALAGLDQARQSTVGIALAAAS HHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVIMPALSWAQRRTGRELGSASAVADSKQTLLCTYLSAVLLAGLLVNSLFAWSWADPIAA HHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH LAIAVIAVREGMNAWRGESCCMPVFAAGASELTGSQCGCCERRAP HHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA