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The map label for this gene is rnaSA [H]

Identifier: 169629554

GI number: 169629554

Start: 2521742

End: 2522143

Strand: Direct

Name: rnaSA [H]

Synonym: MAB_2468

Alternate gene names: 169629554

Gene position: 2521742-2522143 (Clockwise)

Preceding gene: 169629553

Following gene: 169629555

Centisome position: 49.77

GC content: 64.18

Gene sequence:

>402_bases
ATGCAGTACCGTCGAGTGGTGTCGCTGCGTTTGCGTGTGGTGGGTGCTGCGCTTCTCGCGCTGGCACTCATTGGTTGCAC
TGAACCCTCGCCCGCGCGCGCCACCATCAGCCAGTGCAATCTTTCCGAACTGCCCGCGGAGGCCTCAGGGACCGTGGATC
TCATCCATGCCGGCGGCCCCTTTCCCTACCCGCGCAACGACGGCGTCGTGTTCCAGAACCGCGAGCGGGTGCTGCCATCG
GAGCCTCGCGGCTACTACCACGAGTACACAGTCCGCACTCCGGGGGCAAAAACACGGGGCACGCGGCGCATCATCACCGG
CGGCAACCCGCTGAACGATCCGCCGCACGTGTATTACACGGGCGACCACTACCAGTCATTCTGTGAGGTTGAAGGCACAT
GA

Upstream 100 bases:

>100_bases
CGCACTGGCCGAAGCCGAACACGAGGCCATGTGCGCGCAGCTTGCCGCGCTGCGGCAGTGATCCGACAGAAGTGGCGGCT
CGATCTTCTAAGCTACCGGC

Downstream 100 bases:

>100_bases
AGACCTACGTCGTCGATGGCTCTCGTGTCCGCACCCGGGCTGACTTCTTCACCGAACTCGGCCGCGCGGTGAACGGGCCG
GGTGGCTATTTCGGCAGCAA

Product: putative guanyl-specific ribonuclease Sa

Products: NA

Alternate protein names: RNase Sa [H]

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MQYRRVVSLRLRVVGAALLALALIGCTEPSPARATISQCNLSELPAEASGTVDLIHAGGPFPYPRNDGVVFQNRERVLPS
EPRGYYHEYTVRTPGAKTRGTRRIITGGNPLNDPPHVYYTGDHYQSFCEVEGT

Sequences:

>Translated_133_residues
MQYRRVVSLRLRVVGAALLALALIGCTEPSPARATISQCNLSELPAEASGTVDLIHAGGPFPYPRNDGVVFQNRERVLPS
EPRGYYHEYTVRTPGAKTRGTRRIITGGNPLNDPPHVYYTGDHYQSFCEVEGT
>Mature_133_residues
MQYRRVVSLRLRVVGAALLALALIGCTEPSPARATISQCNLSELPAEASGTVDLIHAGGPFPYPRNDGVVFQNRERVLPS
EPRGYYHEYTVRTPGAKTRGTRRIITGGNPLNDPPHVYYTGDHYQSFCEVEGT

Specific function: Unknown

COG id: COG4290

COG function: function code F; Guanyl-specific ribonuclease Sa

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribonuclease N1/T1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000026
- InterPro:   IPR016191 [H]

Pfam domain/function: PF00545 Ribonuclease [H]

EC number: =3.1.27.3 [H]

Molecular weight: Translated: 14629; Mature: 14629

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYRRVVSLRLRVVGAALLALALIGCTEPSPARATISQCNLSELPAEASGTVDLIHAGGP
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCC
FPYPRNDGVVFQNRERVLPSEPRGYYHEYTVRTPGAKTRGTRRIITGGNPLNDPPHVYYT
CCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEC
GDHYQSFCEVEGT
CCCCCCEEEECCC
>Mature Secondary Structure
MQYRRVVSLRLRVVGAALLALALIGCTEPSPARATISQCNLSELPAEASGTVDLIHAGGP
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCC
FPYPRNDGVVFQNRERVLPSEPRGYYHEYTVRTPGAKTRGTRRIITGGNPLNDPPHVYYT
CCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEC
GDHYQSFCEVEGT
CCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3098582; 3118883; 1654932; 8396032; 9757110; 9819211; 11455593 [H]