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The map label for this gene is qcrB [H]

Identifier: 169629553

GI number: 169629553

Start: 2520125

End: 2521702

Strand: Direct

Name: qcrB [H]

Synonym: MAB_2467

Alternate gene names: 169629553

Gene position: 2520125-2521702 (Clockwise)

Preceding gene: 169629550

Following gene: 169629554

Centisome position: 49.73

GC content: 61.98

Gene sequence:

>1578_bases
ATGGGTCAAGCAACGAAGCTTGCCGGTGCGGTCGATTCGCGCTACCGCGCGTCAGCCGGTCTGCGCAGACAGTTGAACAA
GGTCTTTCCCACGCATTGGTCATTCCTGCTGGGGGAGATCGCCGTCTACAGCTTTGTGGTGCTCCTTCTTTCCGGTATCT
ACCTGGCGTTGTTCTTTGATCCGTCCATGTCCGAGATCGCCTACAACGGCGTGTACCAGCCATTGCGCGGCACTGAGATG
TCCACGGCCTACGCAAGCGCACTGGATCTGAGTTTCGAGGTGCGTGGTGGTCTGTTCGTGCGTCAGATCCATCATTGGGC
GGCGCTGATGTTCGCGGCGTCGATTGTGGTGCACCTGGCCCGCGTCTTCTTCACCGGCGCCTTCCGGCGCCCCCGTGAGG
CCAATTGGGTCATCGGATCGGTGCTGTTGATACTCGCCATGGCAGAGGGGTTCACCGGGTACTCACTACCCGATGATCTG
TTGTCCGGGACCGGGCTTCGCGTGGTTACCCAGGGCATGATGTCGCTACCCATTGTCGGTACCTGGATGCACTGGGGGCT
GTTCGGCGGCGATTTTCCCGGGCACAGCGTTCTACCAAGACTTTACGTTCTGCACGTGCTGCTCGTTCCCGCGATCATGA
TCGCGCTGATCAGTGCGCATCTTGTCCTTGTGTGGTACCAGAAACACACTCAGTTCCCGGGACCGCGCCGCACCGAGTCC
AATGTCGTTGGCGTGCGGATCGTTCCGGTGTTCGCACTGAAATCCGGTGCGCTCTTCGCGGTAGTAGTCGCCATCCTGGC
ACTCATGGGCGGTCTGCTGCAGATCAACCCGGTCTGGAATCTTGGTCCCTACAAGCCATCTCAGGTGGCGGCCGGGTCGC
CGCCGGACATTTATCTCATGTGGACCGATGGGCTGTTGCGGCTGGTCCCCAACTGGGAACTGTATGTCTTCGGCCACACC
GTCCCGGCGGTGCTGTGGGGCGTGCTGGGCATCTTGGCTGCCTTTATGGTCATTGTCGCGTGGCCCTGGCTGGAGCAGCA
CTTCACCGGTGATGATGCCGCCCACAACCTGCTGCAGCGCCCACGTGATGCGCCGGTGCGTACAGCCATTGGGGCAGCGG
CCTTTTCGCTGTACTTCTTACTCACACTGTCGTGTATGAACGACATCATCGCGCTGAAGTTCCACATCTCGCTGAACGCG
ACGACGTGGATCGGTCGTATCGGCATGGTCATCTTGCCGGCGGTGGTGTACTACATCGCCTATCGCTGGGCCATCGGCCT
GCAGCGCAGCGATCGCGCGGTGCTGGAGCACGGCATCGAGACCGGCATCATCAAGCGCCTGCCGCACGGTGAGTACATCG
AGATCCACCAGCCGCTGGCCGGAGTCGATGAGCACGGCCATGCGATTCCGCTGGAGTACCAGGGGGCACCGGTGCCTCAG
CGCATGAACAAGCTCGGGTCCGCCGGAGCACCGGGCACCGGCTCGTTCCTGTTCGCCGACCCCGCCGACGAACAACACGC
ACTGGCCGAAGCCGAACACGAGGCCATGTGCGCGCAGCTTGCCGCGCTGCGGCAGTGA

Upstream 100 bases:

>100_bases
ATCGTTCCCGTCCGGATCATCGGAAATCGCTACTACCACTTGTAGTAAATGCGTACTACCCTTCGTAGTAGGCACAAAGT
CTCTTCCCTAGGGAGCAGCC

Downstream 100 bases:

>100_bases
TCCGACAGAAGTGGCGGCTCGATCTTCTAAGCTACCGGCATGCAGTACCGTCGAGTGGTGTCGCTGCGTTTGCGTGTGGT
GGGTGCTGCGCTTCTCGCGC

Product: ubiquinol-cytochrome c reductase cytochrome b subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 525; Mature: 524

Protein sequence:

>525_residues
MGQATKLAGAVDSRYRASAGLRRQLNKVFPTHWSFLLGEIAVYSFVVLLLSGIYLALFFDPSMSEIAYNGVYQPLRGTEM
STAYASALDLSFEVRGGLFVRQIHHWAALMFAASIVVHLARVFFTGAFRRPREANWVIGSVLLILAMAEGFTGYSLPDDL
LSGTGLRVVTQGMMSLPIVGTWMHWGLFGGDFPGHSVLPRLYVLHVLLVPAIMIALISAHLVLVWYQKHTQFPGPRRTES
NVVGVRIVPVFALKSGALFAVVVAILALMGGLLQINPVWNLGPYKPSQVAAGSPPDIYLMWTDGLLRLVPNWELYVFGHT
VPAVLWGVLGILAAFMVIVAWPWLEQHFTGDDAAHNLLQRPRDAPVRTAIGAAAFSLYFLLTLSCMNDIIALKFHISLNA
TTWIGRIGMVILPAVVYYIAYRWAIGLQRSDRAVLEHGIETGIIKRLPHGEYIEIHQPLAGVDEHGHAIPLEYQGAPVPQ
RMNKLGSAGAPGTGSFLFADPADEQHALAEAEHEAMCAQLAALRQ

Sequences:

>Translated_525_residues
MGQATKLAGAVDSRYRASAGLRRQLNKVFPTHWSFLLGEIAVYSFVVLLLSGIYLALFFDPSMSEIAYNGVYQPLRGTEM
STAYASALDLSFEVRGGLFVRQIHHWAALMFAASIVVHLARVFFTGAFRRPREANWVIGSVLLILAMAEGFTGYSLPDDL
LSGTGLRVVTQGMMSLPIVGTWMHWGLFGGDFPGHSVLPRLYVLHVLLVPAIMIALISAHLVLVWYQKHTQFPGPRRTES
NVVGVRIVPVFALKSGALFAVVVAILALMGGLLQINPVWNLGPYKPSQVAAGSPPDIYLMWTDGLLRLVPNWELYVFGHT
VPAVLWGVLGILAAFMVIVAWPWLEQHFTGDDAAHNLLQRPRDAPVRTAIGAAAFSLYFLLTLSCMNDIIALKFHISLNA
TTWIGRIGMVILPAVVYYIAYRWAIGLQRSDRAVLEHGIETGIIKRLPHGEYIEIHQPLAGVDEHGHAIPLEYQGAPVPQ
RMNKLGSAGAPGTGSFLFADPADEQHALAEAEHEAMCAQLAALRQ
>Mature_524_residues
GQATKLAGAVDSRYRASAGLRRQLNKVFPTHWSFLLGEIAVYSFVVLLLSGIYLALFFDPSMSEIAYNGVYQPLRGTEMS
TAYASALDLSFEVRGGLFVRQIHHWAALMFAASIVVHLARVFFTGAFRRPREANWVIGSVLLILAMAEGFTGYSLPDDLL
SGTGLRVVTQGMMSLPIVGTWMHWGLFGGDFPGHSVLPRLYVLHVLLVPAIMIALISAHLVLVWYQKHTQFPGPRRTESN
VVGVRIVPVFALKSGALFAVVVAILALMGGLLQINPVWNLGPYKPSQVAAGSPPDIYLMWTDGLLRLVPNWELYVFGHTV
PAVLWGVLGILAAFMVIVAWPWLEQHFTGDDAAHNLLQRPRDAPVRTAIGAAAFSLYFLLTLSCMNDIIALKFHISLNAT
TWIGRIGMVILPAVVYYIAYRWAIGLQRSDRAVLEHGIETGIIKRLPHGEYIEIHQPLAGVDEHGHAIPLEYQGAPVPQR
MNKLGSAGAPGTGSFLFADPADEQHALAEAEHEAMCAQLAALRQ

Specific function: Unknown

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=228, Percent_Identity=26.7543859649123, Blast_Score=72, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6226529, Length=287, Percent_Identity=26.1324041811847, Blast_Score=70, Evalue=7e-13,
Organism=Saccharomyces cerevisiae, GI6226532, Length=160, Percent_Identity=30, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57569; Mature: 57438

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: PS51002 CYTB_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQATKLAGAVDSRYRASAGLRRQLNKVFPTHWSFLLGEIAVYSFVVLLLSGIYLALFFD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEHEEC
PSMSEIAYNGVYQPLRGTEMSTAYASALDLSFEVRGGLFVRQIHHWAALMFAASIVVHLA
CCHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
RVFFTGAFRRPREANWVIGSVLLILAMAEGFTGYSLPDDLLSGTGLRVVTQGMMSLPIVG
HHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCHH
TWMHWGLFGGDFPGHSVLPRLYVLHVLLVPAIMIALISAHLVLVWYQKHTQFPGPRRTES
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHCCCCCCCCCCC
NVVGVRIVPVFALKSGALFAVVVAILALMGGLLQINPVWNLGPYKPSQVAAGSPPDIYLM
CEEEEEEEEEEHHCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCEEEE
WTDGLLRLVPNWELYVFGHTVPAVLWGVLGILAAFMVIVAWPWLEQHFTGDDAAHNLLQR
ECCCHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
PRDAPVRTAIGAAAFSLYFLLTLSCMNDIIALKFHISLNATTWIGRIGMVILPAVVYYIA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCHHHHHHHHHHHHHHHHHHHH
YRWAIGLQRSDRAVLEHGIETGIIKRLPHGEYIEIHQPLAGVDEHGHAIPLEYQGAPVPQ
HHHHHCCCCCCHHHHHHCHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCHH
RMNKLGSAGAPGTGSFLFADPADEQHALAEAEHEAMCAQLAALRQ
HHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GQATKLAGAVDSRYRASAGLRRQLNKVFPTHWSFLLGEIAVYSFVVLLLSGIYLALFFD
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEHEEC
PSMSEIAYNGVYQPLRGTEMSTAYASALDLSFEVRGGLFVRQIHHWAALMFAASIVVHLA
CCHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
RVFFTGAFRRPREANWVIGSVLLILAMAEGFTGYSLPDDLLSGTGLRVVTQGMMSLPIVG
HHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCHH
TWMHWGLFGGDFPGHSVLPRLYVLHVLLVPAIMIALISAHLVLVWYQKHTQFPGPRRTES
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHCCCCCCCCCCC
NVVGVRIVPVFALKSGALFAVVVAILALMGGLLQINPVWNLGPYKPSQVAAGSPPDIYLM
CEEEEEEEEEEHHCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCEEEE
WTDGLLRLVPNWELYVFGHTVPAVLWGVLGILAAFMVIVAWPWLEQHFTGDDAAHNLLQR
ECCCHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
PRDAPVRTAIGAAAFSLYFLLTLSCMNDIIALKFHISLNATTWIGRIGMVILPAVVYYIA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCHHHHHHHHHHHHHHHHHHHH
YRWAIGLQRSDRAVLEHGIETGIIKRLPHGEYIEIHQPLAGVDEHGHAIPLEYQGAPVPQ
HHHHHCCCCCCHHHHHHCHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCHH
RMNKLGSAGAPGTGSFLFADPADEQHALAEAEHEAMCAQLAALRQ
HHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11234002; 2181404 [H]