Click here to switch to the map view.

The map label for this gene is lpqH [H]

Identifier: 169629465

GI number: 169629465

Start: 2437288

End: 2437776

Strand: Direct

Name: lpqH [H]

Synonym: MAB_2379

Alternate gene names: 169629465

Gene position: 2437288-2437776 (Clockwise)

Preceding gene: 169629463

Following gene: 169629467

Centisome position: 48.1

GC content: 60.53

Gene sequence:

>489_bases
ATGCAGCGCACCGGCAGTGTGGTTGTCATAGGAGCAGGGGCGATCATCGCTTTGGGCTTGGCTGGGTGTTCGGGTGATGG
GAATGAATCGGCGCCCTCTTCAGCGGAAAAGACCACGGTCAGCGCCGAAGGTGGTGCCGCAGCGATGAATAGCAGCGCCA
AAGTGGTCGTGGACGGCAAAGAGAAAAAGGTCGAAGGCGCTATCGCGTGCTCCACTGCAGCCGGGCAAGTCAATATCGGA
ATGGGCGCCGGGATGCAGGCAATCGCCGTGGTGCTATCCGACGGCGATTCGCCCAAGGTGACCTCGGTAGGCCTGGGCAA
CATCGACGGTGTGACCCTGGGCTTTGCGGACGGGGCTCCAGGTGGAAAGGCAACCGCAACAAAAGATGGCAAGAAATACA
CCGTGACCGGCACGGCAACCGGCGTGGACACAGCCAACCCCATGCAACCGATTGAGAAGCCCTTCGAAATCGAAGTCACC
TGCCCCTAG

Upstream 100 bases:

>100_bases
GGGTGATCGGCTACGGTGCAGTTTCGAGATTGATTGTGCGCGCCCAGCTTTAACGTGTGACCGTCTGGCTGGGCGCCGAA
ACATCGTGAAGGAGAACGCA

Downstream 100 bases:

>100_bases
TACACGCGACAAGAGCGCCAAAGCGCATACTTCTTGGCCCGGGCGCCTCCCAGCGGGGTGGGGCGCCCGGACCAAGATTA
CTGCACTCCAATCTATTTGG

Product: lipoprotein LpqH precursor

Products: NA

Alternate protein names: 19 kDa lipoprotein antigen [H]

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MQRTGSVVVIGAGAIIALGLAGCSGDGNESAPSSAEKTTVSAEGGAAAMNSSAKVVVDGKEKKVEGAIACSTAAGQVNIG
MGAGMQAIAVVLSDGDSPKVTSVGLGNIDGVTLGFADGAPGGKATATKDGKKYTVTGTATGVDTANPMQPIEKPFEIEVT
CP

Sequences:

>Translated_162_residues
MQRTGSVVVIGAGAIIALGLAGCSGDGNESAPSSAEKTTVSAEGGAAAMNSSAKVVVDGKEKKVEGAIACSTAAGQVNIG
MGAGMQAIAVVLSDGDSPKVTSVGLGNIDGVTLGFADGAPGGKATATKDGKKYTVTGTATGVDTANPMQPIEKPFEIEVT
CP
>Mature_162_residues
MQRTGSVVVIGAGAIIALGLAGCSGDGNESAPSSAEKTTVSAEGGAAAMNSSAKVVVDGKEKKVEGAIACSTAAGQVNIG
MGAGMQAIAVVLSDGDSPKVTSVGLGNIDGVTLGFADGAPGGKATATKDGKKYTVTGTATGVDTANPMQPIEKPFEIEVT
CP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mycobacterial 19 kDa antigen family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008691 [H]

Pfam domain/function: PF05481 Myco_19_kDa [H]

EC number: NA

Molecular weight: Translated: 15643; Mature: 15643

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRTGSVVVIGAGAIIALGLAGCSGDGNESAPSSAEKTTVSAEGGAAAMNSSAKVVVDGK
CCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCEEECCCCEEEECCC
EKKVEGAIACSTAAGQVNIGMGAGMQAIAVVLSDGDSPKVTSVGLGNIDGVTLGFADGAP
CCCCCEEEEEECCCCEEEECCCCCCEEEEEEEECCCCCCEEEEECCCCCCEEEECCCCCC
GGKATATKDGKKYTVTGTATGVDTANPMQPIEKPFEIEVTCP
CCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MQRTGSVVVIGAGAIIALGLAGCSGDGNESAPSSAEKTTVSAEGGAAAMNSSAKVVVDGK
CCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCEEECCCCEEEECCC
EKKVEGAIACSTAAGQVNIGMGAGMQAIAVVLSDGDSPKVTSVGLGNIDGVTLGFADGAP
CCCCCEEEEEECCCCEEEECCCCCCEEEEEEEECCCCCCEEEEECCCCCCEEEECCCCCC
GGKATATKDGKKYTVTGTATGVDTANPMQPIEKPFEIEVTCP
CCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2230723; 12788972 [H]