| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is pheT [H]
Identifier: 169629421
GI number: 169629421
Start: 2388274
End: 2390757
Strand: Direct
Name: pheT [H]
Synonym: MAB_2335
Alternate gene names: 169629421
Gene position: 2388274-2390757 (Clockwise)
Preceding gene: 169629420
Following gene: 169629422
Centisome position: 47.13
GC content: 65.42
Gene sequence:
>2484_bases ATGCGAGTTCCTTACAGCTGGCTGCTTGAGGTGTTGCGGGTCGGTGCCCCGGAGTTCACCGCCAGTGCGGCCGATATCGA AGAAACCCTGATTCGCATTGGCCATGAGGTCGAAGAGGTCGTGATCCCCGGGCCGGTGACAGGGCCTCTCGTGGTGGGAC GAGTTGTTCAGATCACCGAACTCACCGAGTTCAAGAAGCCGATCCGCTTCTGCCTGGTTGACGTTGGCGAGGCCGAGCCT CGTGAAATCGTGTGTGGTGCTTCTAATTTCGCGGTCGATGATCTAGTTGTAGTGGCACTTCCGGGCGTCACGCTGCCGGG TGACTTCACGATCGCGACGCGAAAGACATACGGGCATACGTCCGATGGCATGATCTGCTCTACGAGCGAGCTCGGCCTGG GCATCGAATCGTCAGGATCGCCGGGCATCTTGGTGCTGCCACCGGAAACCGCGGCGCCCGGAGCCGATGCCATCGCGGTG GTGGGACTGGATGATGCCATTTACGATCTGTCCATCACGCCCGATCGGGGTTACTGTCTGTCTGTCCGCGGGCTGGCTCG CGATCTGGCCTGCGCATACGACCTGAACTTCGTAGACCCCGCTGCAGTACAGCCTCTTCCGGCGGAAGGGGCGTCGTTAC CCGTACATATCGATGCCGGGACCGGAGTGAAGCGCTTCGGGCTGCGGCCTGTGGTCGGCATCGATCCGGCCGCGGTCTCG CCCTGGTGGTTACAGCGGCGACTGATGCTTTGTGGGATCCGGGCAATCTCGCCCGCGGTAGACGCGACCAACTACGTGAT GCTCGAGATCGGGCACCCCATGCATGCGCACGACAAGACGCATGTCCGTGGCGATTTCCGAGTACGGTTCGCAACACCCG GCGAAACGGTGGTCACGCTGGACGATCTGGAGCGCAGACTCGAACCCGGCGACGTGCTTATTGCCGACGATGCGGGTGTC ACCGCCATCGGCGGCGTGATGGGCGCCGGCAGCACCGAGATGCGGGAGGATTCCACCGATGTGCTGCTGGAAGCCGCGGT GTGGGATCCGGCGGCCGTGCTGCGCACGCAACGCCGGCTTCATCTGCACAGCGAGGCGGGGCGTCGCTATGAGCGCTCCG TGGATCCTGCAATATCCGTTGCCGCGCTTGATCGCTGCGCATCTCTGCTGTGCGATATCGCCGGCGGGACCGCACCTGCC GAACTCACGGACTGGCGTGCTGACAGCGAAGCCCGGCCAGAGATTGTTATGGCCGCCGATCTTCCGGCGCGGATCGCCGG GGTCGATTATGCGGACGGCGTGGTGGAACGACGGCTGCGCCAAATCGGCGCCGGAGTGGTCGTCGAGGGCGACACACTGC GAGTGACGCCGCCGAGCTGGCGCCCGGACATCACCGAAGGCGCCGATCTGGTCGAGGAAGTGCTCCGCCTTGAAGGTCTC AGCGATATTCCCTCCATACTGCCCGCGGCACCGCAAGGCGGAGGTCTCACGCCGGTGCAGCGCCGTCGTCGTGCGGTAGG GAAGTCGTTGGCGCTGAACGGTTACACAGAGATCTTGCCGATGCCGTTCCTGCCTGCCGGCGTGTTCGACGCGTGGGGTC TGGATGACAACGACCCGCGCCGTCACACCACGAAGGTGCTCAATCCACTGGAATCGGATCGCCCGGAGCTCGCCAGCACC CTGTTGCCGGGCGTGCTGGAAGCACTGTCGCGCAACATTTCCCGAGGAAATGCCGACGTTGCGCTCTTTACCATCGGCCA GGTGGTGCGGCCGACGGAGACCACCCGGGCGATTCCATTGCTCGACGTGAGCGGTCGACCTTCGGAGGCCGAGCTCCATG CGCTGCTCGAATCGCTACCCGCACAACCGGTCCACGTGGCGCTGGTGCTGGCCGGTGCGCGCGAGCCGAGCGGGCCGTGG GGACGTGGTCGCACGGCCGATGTCACCGACGCGCTGGAGGCGGCCCGGGTCATCGGGCGTGCTGCCTACGTCGACATAGC GCTGCGCGCAGGTGAGGAACTGCCGTGGCATCCGGGGCGTTGTGCCGAGATCGTGGTCGACGGCCAGATTGTCGGGCATA CCGGAGAGCTGCATCCTGCGGTAATCGAGCGTCTCGGCCTGCCGAAGCGGACCTGCGCCCTGGAGCTCAGCCTTGACGCG CTTCCTGTTGCCAATCCGCTTCCGGCACCGAGGATTTCGCCCTTCCCGGCGGTACACCAAGACGTGTCGCTGGTGGTTAC CGAGACGGTCCCGGCCGATGCCGTCACCGAAGCGCTGCGTGATGGCGCGGGGGAGCTGATCGAGGATGTGCGGCTGGTGG AGGTCTACACCGGACCGCAGGTTGGCGAGGGCAACAAATCTCTGAACTTCCGGCTGCGCTTCCGGGCGGCGGACCGAACT CTCACAGAAGACGAAGCCACCGCCGCGCGGGTGGCGGCGGTGGCTTCTGCGGCTGAGCGCGTGGGGGCGGCCCAACGCGC TTAG
Upstream 100 bases:
>100_bases GATTGGAGCGCACCCTGCAGTTCCGCAATGGGCTTCCCGATATGCGCGACATGATCGAGGGCGACGTCCGCTTCAGCTTG CCGTTCGGAGTGAGTGCCTG
Downstream 100 bases:
>100_bases CAGGTCTTACTGTCCTCGGCGCTGGTCAGCCTGCTCGCGGTGCTGCTCCTGGCGCTGACGATCGGCACGATCCGACATGG AAGGCTCCCTTCTCGTACTC
Product: phenylalanyl-tRNA synthetase subunit beta
Products: NA
Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]
Number of amino acids: Translated: 827; Mature: 827
Protein sequence:
>827_residues MRVPYSWLLEVLRVGAPEFTASAADIEETLIRIGHEVEEVVIPGPVTGPLVVGRVVQITELTEFKKPIRFCLVDVGEAEP REIVCGASNFAVDDLVVVALPGVTLPGDFTIATRKTYGHTSDGMICSTSELGLGIESSGSPGILVLPPETAAPGADAIAV VGLDDAIYDLSITPDRGYCLSVRGLARDLACAYDLNFVDPAAVQPLPAEGASLPVHIDAGTGVKRFGLRPVVGIDPAAVS PWWLQRRLMLCGIRAISPAVDATNYVMLEIGHPMHAHDKTHVRGDFRVRFATPGETVVTLDDLERRLEPGDVLIADDAGV TAIGGVMGAGSTEMREDSTDVLLEAAVWDPAAVLRTQRRLHLHSEAGRRYERSVDPAISVAALDRCASLLCDIAGGTAPA ELTDWRADSEARPEIVMAADLPARIAGVDYADGVVERRLRQIGAGVVVEGDTLRVTPPSWRPDITEGADLVEEVLRLEGL SDIPSILPAAPQGGGLTPVQRRRRAVGKSLALNGYTEILPMPFLPAGVFDAWGLDDNDPRRHTTKVLNPLESDRPELAST LLPGVLEALSRNISRGNADVALFTIGQVVRPTETTRAIPLLDVSGRPSEAELHALLESLPAQPVHVALVLAGAREPSGPW GRGRTADVTDALEAARVIGRAAYVDIALRAGEELPWHPGRCAEIVVDGQIVGHTGELHPAVIERLGLPKRTCALELSLDA LPVANPLPAPRISPFPAVHQDVSLVVTETVPADAVTEALRDGAGELIEDVRLVEVYTGPQVGEGNKSLNFRLRFRAADRT LTEDEATAARVAAVASAAERVGAAQRA
Sequences:
>Translated_827_residues MRVPYSWLLEVLRVGAPEFTASAADIEETLIRIGHEVEEVVIPGPVTGPLVVGRVVQITELTEFKKPIRFCLVDVGEAEP REIVCGASNFAVDDLVVVALPGVTLPGDFTIATRKTYGHTSDGMICSTSELGLGIESSGSPGILVLPPETAAPGADAIAV VGLDDAIYDLSITPDRGYCLSVRGLARDLACAYDLNFVDPAAVQPLPAEGASLPVHIDAGTGVKRFGLRPVVGIDPAAVS PWWLQRRLMLCGIRAISPAVDATNYVMLEIGHPMHAHDKTHVRGDFRVRFATPGETVVTLDDLERRLEPGDVLIADDAGV TAIGGVMGAGSTEMREDSTDVLLEAAVWDPAAVLRTQRRLHLHSEAGRRYERSVDPAISVAALDRCASLLCDIAGGTAPA ELTDWRADSEARPEIVMAADLPARIAGVDYADGVVERRLRQIGAGVVVEGDTLRVTPPSWRPDITEGADLVEEVLRLEGL SDIPSILPAAPQGGGLTPVQRRRRAVGKSLALNGYTEILPMPFLPAGVFDAWGLDDNDPRRHTTKVLNPLESDRPELAST LLPGVLEALSRNISRGNADVALFTIGQVVRPTETTRAIPLLDVSGRPSEAELHALLESLPAQPVHVALVLAGAREPSGPW GRGRTADVTDALEAARVIGRAAYVDIALRAGEELPWHPGRCAEIVVDGQIVGHTGELHPAVIERLGLPKRTCALELSLDA LPVANPLPAPRISPFPAVHQDVSLVVTETVPADAVTEALRDGAGELIEDVRLVEVYTGPQVGEGNKSLNFRLRFRAADRT LTEDEATAARVAAVASAAERVGAAQRA >Mature_827_residues MRVPYSWLLEVLRVGAPEFTASAADIEETLIRIGHEVEEVVIPGPVTGPLVVGRVVQITELTEFKKPIRFCLVDVGEAEP REIVCGASNFAVDDLVVVALPGVTLPGDFTIATRKTYGHTSDGMICSTSELGLGIESSGSPGILVLPPETAAPGADAIAV VGLDDAIYDLSITPDRGYCLSVRGLARDLACAYDLNFVDPAAVQPLPAEGASLPVHIDAGTGVKRFGLRPVVGIDPAAVS PWWLQRRLMLCGIRAISPAVDATNYVMLEIGHPMHAHDKTHVRGDFRVRFATPGETVVTLDDLERRLEPGDVLIADDAGV TAIGGVMGAGSTEMREDSTDVLLEAAVWDPAAVLRTQRRLHLHSEAGRRYERSVDPAISVAALDRCASLLCDIAGGTAPA ELTDWRADSEARPEIVMAADLPARIAGVDYADGVVERRLRQIGAGVVVEGDTLRVTPPSWRPDITEGADLVEEVLRLEGL SDIPSILPAAPQGGGLTPVQRRRRAVGKSLALNGYTEILPMPFLPAGVFDAWGLDDNDPRRHTTKVLNPLESDRPELAST LLPGVLEALSRNISRGNADVALFTIGQVVRPTETTRAIPLLDVSGRPSEAELHALLESLPAQPVHVALVLAGAREPSGPW GRGRTADVTDALEAARVIGRAAYVDIALRAGEELPWHPGRCAEIVVDGQIVGHTGELHPAVIERLGLPKRTCALELSLDA LPVANPLPAPRISPFPAVHQDVSLVVTETVPADAVTEALRDGAGELIEDVRLVEVYTGPQVGEGNKSLNFRLRFRAADRT LTEDEATAARVAAVASAAERVGAAQRA
Specific function: Unknown
COG id: COG0072
COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788006, Length=766, Percent_Identity=33.420365535248, Blast_Score=327, Evalue=1e-90,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005146 - InterPro: IPR005147 - InterPro: IPR009061 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR004532 - InterPro: IPR020825 - InterPro: IPR005121 - InterPro: IPR002547 [H]
Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind [H]
EC number: =6.1.1.20 [H]
Molecular weight: Translated: 87866; Mature: 87866
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: PS50886 TRBD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVPYSWLLEVLRVGAPEFTASAADIEETLIRIGHEVEEVVIPGPVTGPLVVGRVVQITE CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHEEEECCCCCCHHHHHHHHHHHH LTEFKKPIRFCLVDVGEAEPREIVCGASNFAVDDLVVVALPGVTLPGDFTIATRKTYGHT HHHHHHHHHEEEEECCCCCCCEEEECCCCCCHHCEEEEEECCEECCCCEEEEEEECCCCC SDGMICSTSELGLGIESSGSPGILVLPPETAAPGADAIAVVGLDDAIYDLSITPDRGYCL CCCEEEECHHCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEE SVRGLARDLACAYDLNFVDPAAVQPLPAEGASLPVHIDAGTGVKRFGLRPVVGIDPAAVS EHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCC PWWLQRRLMLCGIRAISPAVDATNYVMLEIGHPMHAHDKTHVRGDFRVRFATPGETVVTL HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEECCEEEEEEECCCCEEEEH DDLERRLEPGDVLIADDAGVTAIGGVMGAGSTEMREDSTDVLLEAAVWDPAAVLRTQRRL HHHHHHCCCCCEEEECCCCCEEHHHHHCCCCCCCCCCCHHHEEEEHHCCHHHHHHHHHHH HLHSEAGRRYERSVDPAISVAALDRCASLLCDIAGGTAPAELTDWRADSEARPEIVMAAD HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCEEEEEC LPARIAGVDYADGVVERRLRQIGAGVVVEGDTLRVTPPSWRPDITEGADLVEEVLRLEGL CCHHHCCCCHHHHHHHHHHHHHCCCEEEECCEEEECCCCCCCCCCCHHHHHHHHHHHCCC SDIPSILPAAPQGGGLTPVQRRRRAVGKSLALNGYTEILPMPFLPAGVFDAWGLDDNDPR HHHHHHCCCCCCCCCCCHHHHHHHHHCCCEECCCCHHHCCCCCCCCCCCCCCCCCCCCCH RHTTKVLNPLESDRPELASTLLPGVLEALSRNISRGNADVALFTIGQVVRPTETTRAIPL HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEE LDVSGRPSEAELHALLESLPAQPVHVALVLAGAREPSGPWGRGRTADVTDALEAARVIGR EECCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH AAYVDIALRAGEELPWHPGRCAEIVVDGQIVGHTGELHPAVIERLGLPKRTCALELSLDA HHHEEEEEECCCCCCCCCCCEEEEEECCEEECCCCCCCHHHHHHCCCCCHHEEEEEECCC LPVANPLPAPRISPFPAVHQDVSLVVTETVPADAVTEALRDGAGELIEDVRLVEVYTGPQ CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCHHHHHHCCEEEEEECCCC VGEGNKSLNFRLRFRAADRTLTEDEATAARVAAVASAAERVGAAQRA CCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRVPYSWLLEVLRVGAPEFTASAADIEETLIRIGHEVEEVVIPGPVTGPLVVGRVVQITE CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHEEEECCCCCCHHHHHHHHHHHH LTEFKKPIRFCLVDVGEAEPREIVCGASNFAVDDLVVVALPGVTLPGDFTIATRKTYGHT HHHHHHHHHEEEEECCCCCCCEEEECCCCCCHHCEEEEEECCEECCCCEEEEEEECCCCC SDGMICSTSELGLGIESSGSPGILVLPPETAAPGADAIAVVGLDDAIYDLSITPDRGYCL CCCEEEECHHCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEE SVRGLARDLACAYDLNFVDPAAVQPLPAEGASLPVHIDAGTGVKRFGLRPVVGIDPAAVS EHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCC PWWLQRRLMLCGIRAISPAVDATNYVMLEIGHPMHAHDKTHVRGDFRVRFATPGETVVTL HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEECCEEEEEEECCCCEEEEH DDLERRLEPGDVLIADDAGVTAIGGVMGAGSTEMREDSTDVLLEAAVWDPAAVLRTQRRL HHHHHHCCCCCEEEECCCCCEEHHHHHCCCCCCCCCCCHHHEEEEHHCCHHHHHHHHHHH HLHSEAGRRYERSVDPAISVAALDRCASLLCDIAGGTAPAELTDWRADSEARPEIVMAAD HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCEEEEEC LPARIAGVDYADGVVERRLRQIGAGVVVEGDTLRVTPPSWRPDITEGADLVEEVLRLEGL CCHHHCCCCHHHHHHHHHHHHHCCCEEEECCEEEECCCCCCCCCCCHHHHHHHHHHHCCC SDIPSILPAAPQGGGLTPVQRRRRAVGKSLALNGYTEILPMPFLPAGVFDAWGLDDNDPR HHHHHHCCCCCCCCCCCHHHHHHHHHCCCEECCCCHHHCCCCCCCCCCCCCCCCCCCCCH RHTTKVLNPLESDRPELASTLLPGVLEALSRNISRGNADVALFTIGQVVRPTETTRAIPL HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEE LDVSGRPSEAELHALLESLPAQPVHVALVLAGAREPSGPWGRGRTADVTDALEAARVIGR EECCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH AAYVDIALRAGEELPWHPGRCAEIVVDGQIVGHTGELHPAVIERLGLPKRTCALELSLDA HHHEEEEEECCCCCCCCCCCEEEEEECCEEECCCCCCCHHHHHHCCCCCHHEEEEEECCC LPVANPLPAPRISPFPAVHQDVSLVVTETVPADAVTEALRDGAGELIEDVRLVEVYTGPQ CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCHHHHHHCCEEEEEECCCC VGEGNKSLNFRLRFRAADRTLTEDEATAARVAAVASAAERVGAAQRA CCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA