Click here to switch to the map view.

The map label for this gene is mmpS4 [H]

Identifier: 169629386

GI number: 169629386

Start: 2348718

End: 2349119

Strand: Direct

Name: mmpS4 [H]

Synonym: MAB_2300

Alternate gene names: 169629386

Gene position: 2348718-2349119 (Clockwise)

Preceding gene: 169629384

Following gene: 169629387

Centisome position: 46.35

GC content: 59.45

Gene sequence:

>402_bases
GTGGTCATGGTCCTGGTCCTGGTCATCGCGGGCTTCGCGGTATGGCGGATTCGCGGCATCTTCGGTTCGCATCAGCTGCC
CACCTACGCCGGCAGCATGACCGACGACAAAAACAACTCCAAGCCCAAGCATGTCCTCTACGAGATCTTCGGCCCGCCCG
GCACCATTGCGGACATCAACTACATCGACAAGGAAGGGGAGCCCCACCAAATCAACGGGGCGGTCCTGCCGTGGTCGATC
GAGATCATCACCACCGCGCCGTCGATGACGGGCAACATCTTGGCCCAGACGCGCAATGCCGACGGGCTGGGTTGCCGCAT
CACGGCCAATGACGAGAAAAAAGATGAAAGGTATACCAACGAGGTGAGCGCCTACGTCTACTGCTTTGTGAAGTCCGCAT
GA

Upstream 100 bases:

>100_bases
TTGAGCCAGGTTCGAGCAAGCACGCGGTACCGGCTTGCGAAACGCCAACGGGTGAAGGGGTTTTACGATTCTCAGCGTTC
TGAAGCGGGCTTGGATCCCG

Downstream 100 bases:

>100_bases
GCGGGTCGCACGCAGGACGTTCGGCGGCCGAACCCACCTTCTTGGCCAAATGGATCCGCCGCCTGTCGATCCCCATCGTC
ATCGGCTGGCTGGCCATCGT

Product: putative membrane protein, MmpS

Products: NA

Alternate protein names: PGB14T-X [H]

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MVMVLVLVIAGFAVWRIRGIFGSHQLPTYAGSMTDDKNNSKPKHVLYEIFGPPGTIADINYIDKEGEPHQINGAVLPWSI
EIITTAPSMTGNILAQTRNADGLGCRITANDEKKDERYTNEVSAYVYCFVKSA

Sequences:

>Translated_133_residues
MVMVLVLVIAGFAVWRIRGIFGSHQLPTYAGSMTDDKNNSKPKHVLYEIFGPPGTIADINYIDKEGEPHQINGAVLPWSI
EIITTAPSMTGNILAQTRNADGLGCRITANDEKKDERYTNEVSAYVYCFVKSA
>Mature_133_residues
MVMVLVLVIAGFAVWRIRGIFGSHQLPTYAGSMTDDKNNSKPKHVLYEIFGPPGTIADINYIDKEGEPHQINGAVLPWSI
EIITTAPSMTGNILAQTRNADGLGCRITANDEKKDERYTNEVSAYVYCFVKSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008693 [H]

Pfam domain/function: PF05423 Mycobact_memb [H]

EC number: NA

Molecular weight: Translated: 14649; Mature: 14649

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMVLVLVIAGFAVWRIRGIFGSHQLPTYAGSMTDDKNNSKPKHVLYEIFGPPGTIADIN
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEECE
YIDKEGEPHQINGAVLPWSIEIITTAPSMTGNILAQTRNADGLGCRITANDEKKDERYTN
EECCCCCCCEECCEECCEEEEEEEECCCCCCCEEEEECCCCCCEEEEECCCCCCHHHHHH
EVSAYVYCFVKSA
CCEEEEEEEEECC
>Mature Secondary Structure
MVMVLVLVIAGFAVWRIRGIFGSHQLPTYAGSMTDDKNNSKPKHVLYEIFGPPGTIADIN
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEECE
YIDKEGEPHQINGAVLPWSIEIITTAPSMTGNILAQTRNADGLGCRITANDEKKDERYTN
EECCCCCCCEECCEECCEEEEEEEECCCCCCCEEEEECCCCCCEEEEECCCCCCHHHHHH
EVSAYVYCFVKSA
CCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]