| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is mtb12 [H]
Identifier: 169629247
GI number: 169629247
Start: 2175299
End: 2175826
Strand: Reverse
Name: mtb12 [H]
Synonym: MAB_2161c
Alternate gene names: 169629247
Gene position: 2175826-2175299 (Counterclockwise)
Preceding gene: 169629255
Following gene: 169629246
Centisome position: 42.94
GC content: 66.29
Gene sequence:
>528_bases ATGACGGGGGTCGCCATGCTGGGTTTACTCGCGGCCGTGGCGGTTGGCTCGGCAGTGCCGACGGGCGAGCCGACAGCCAG CTCTGCTAGCCCAACAGCAACGACCGTGACGTCCTTCACCATCGCCCCCGCGTCATGGGATGTGCCCCTGGATGTGCCCG CCGAGCCCGCCGACGGGACACCCACGCCCGACGAGCTGAGCGGTTTGCTGTATTCGCTCGCCGATCCGGGCGTGTCGGCG CTCGCCAAGGGCGGTCTGGTGGAGGGCGGCATCGGTGCCGGGGAAGCCATCTATGCCGATCGCGCCTTCAAGAACGCCAA CCGTGACGGGTTCCTGCCGCTGGCCTTCACCGTGTCCAACGTCAAGTCCACCGGGCCAGGCCTCGCCGCGGCCGCGGTCA CCATTACCGGCCCCAAAACCCAGGCCTACACCACCAACATCAACTTCGTGGATCAGGACGGCTGGAAGATCAGCAAGGCC TCGGCCATTTCGCTGATTCAGGCAGCATCCGGTAAGTCTGGAAGGTAG
Upstream 100 bases:
>100_bases CTACGCGTGCGGGGTCTACCCGTTCATGGGGACGTCTACGCTGTTAGCGTTCGTCACATTCAGGCCGATCGAAAGGACAA CCGTGAGCTCACGAACCGGT
Downstream 100 bases:
>100_bases ACGTGGATGAGGAGGATTGGACGATCTCCAAAACCTCACTCGCCGATATCGTCACCGCACTTGGCCGAATGACTTAGCCG ATACGCCGAATGGGAGTCAC
Product: low molecular weight antigen Mtb12
Products: NA
Alternate protein names: CFP-2; Low molecular weight protein antigen 2 [H]
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MTGVAMLGLLAAVAVGSAVPTGEPTASSASPTATTVTSFTIAPASWDVPLDVPAEPADGTPTPDELSGLLYSLADPGVSA LAKGGLVEGGIGAGEAIYADRAFKNANRDGFLPLAFTVSNVKSTGPGLAAAAVTITGPKTQAYTTNINFVDQDGWKISKA SAISLIQAASGKSGR
Sequences:
>Translated_175_residues MTGVAMLGLLAAVAVGSAVPTGEPTASSASPTATTVTSFTIAPASWDVPLDVPAEPADGTPTPDELSGLLYSLADPGVSA LAKGGLVEGGIGAGEAIYADRAFKNANRDGFLPLAFTVSNVKSTGPGLAAAAVTITGPKTQAYTTNINFVDQDGWKISKA SAISLIQAASGKSGR >Mature_174_residues TGVAMLGLLAAVAVGSAVPTGEPTASSASPTATTVTSFTIAPASWDVPLDVPAEPADGTPTPDELSGLLYSLADPGVSAL AKGGLVEGGIGAGEAIYADRAFKNANRDGFLPLAFTVSNVKSTGPGLAAAAVTITGPKTQAYTTNINFVDQDGWKISKAS AISLIQAASGKSGR
Specific function: May play a role in the development of protective immune responses [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MTB12 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020235 - ProDom: PD033474 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17307; Mature: 17175
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGVAMLGLLAAVAVGSAVPTGEPTASSASPTATTVTSFTIAPASWDVPLDVPAEPADGT CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC PTPDELSGLLYSLADPGVSALAKGGLVEGGIGAGEAIYADRAFKNANRDGFLPLAFTVSN CCHHHHHHHHHHHCCCCHHHHHCCCCEECCCCCCCEEEHHHHHHCCCCCCCEEEEEEECC VKSTGPGLAAAAVTITGPKTQAYTTNINFVDQDGWKISKASAISLIQAASGKSGR CCCCCCCCEEEEEEEECCCCEEEEECCEEEECCCCEECHHHHHHHHHHCCCCCCC >Mature Secondary Structure TGVAMLGLLAAVAVGSAVPTGEPTASSASPTATTVTSFTIAPASWDVPLDVPAEPADGT CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC PTPDELSGLLYSLADPGVSALAKGGLVEGGIGAGEAIYADRAFKNANRDGFLPLAFTVSN CCHHHHHHHHHHHCCCCHHHHHCCCCEECCCCCCCEEEHHHHHHCCCCCCCEEEEEEECC VKSTGPGLAAAAVTITGPKTQAYTTNINFVDQDGWKISKASAISLIQAASGKSGR CCCCCCCCEEEEEEEECCCCEEEEECCEEEECCCCEECHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]