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The map label for this gene is ybdB [C]

Identifier: 169629131

GI number: 169629131

Start: 2045857

End: 2046294

Strand: Direct

Name: ybdB [C]

Synonym: MAB_2044

Alternate gene names: 169629131

Gene position: 2045857-2046294 (Clockwise)

Preceding gene: 169629130

Following gene: 169629132

Centisome position: 40.37

GC content: 62.33

Gene sequence:

>438_bases
GTGCAATTCACCACGTTCAACGAACAGGTCGCTGAGCAACTCAAGAGCGCAGCAGAAACCACGGGCGGGTTGGCCGGTTA
CCTCGGCTTCCGTCACACCGAATTCGCTGCGGGACGGCTCGTCGCGGAGATGGACGCACGCGACGACCTGAAGACGCCGT
TCGGCAACCTGCATGGGGGCTGCTTATCGGCCATGGTCGACCACTGCCTCGGCGTGGTGTTTTATCCCGTGATTCCACTG
GGATCTTGGGTCGCGACAACGGAGTTCAAACTGAATCTGCTTCGTCCGGTCTCCAGCGGCACCTGTGTAGCCACAGCTGA
GATCATCGCGCTGGGCAGAACCAGCGGGGTGGCGCGGATCGACATCTGCAACGACGGCAGAGCGGTGTGTGCGGCCCAGG
GAACCGTCACCGTCGTCGCACCGAAGACGAGCTCCTGA

Upstream 100 bases:

>100_bases
GTCGAGGTTTCTCCTTCCGGCGATCCTGGCGGGTGACCACGCTCGACCGATGTGACATCTATGGAGTAATGTCTCGACGG
CAGATGAGGTAGGAGGGCCT

Downstream 100 bases:

>100_bases
TGTCGGCAAAGAGAACAGGCGATTCGTCGGCTCCTGTGGTCGAGCGCGTGCCCACGGCAGACGGGCTGGCGCTGGCCGTC
GACCTCTACCACTGTGACGC

Product: phenylacetic acid degradation-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MQFTTFNEQVAEQLKSAAETTGGLAGYLGFRHTEFAAGRLVAEMDARDDLKTPFGNLHGGCLSAMVDHCLGVVFYPVIPL
GSWVATTEFKLNLLRPVSSGTCVATAEIIALGRTSGVARIDICNDGRAVCAAQGTVTVVAPKTSS

Sequences:

>Translated_145_residues
MQFTTFNEQVAEQLKSAAETTGGLAGYLGFRHTEFAAGRLVAEMDARDDLKTPFGNLHGGCLSAMVDHCLGVVFYPVIPL
GSWVATTEFKLNLLRPVSSGTCVATAEIIALGRTSGVARIDICNDGRAVCAAQGTVTVVAPKTSS
>Mature_145_residues
MQFTTFNEQVAEQLKSAAETTGGLAGYLGFRHTEFAAGRLVAEMDARDDLKTPFGNLHGGCLSAMVDHCLGVVFYPVIPL
GSWVATTEFKLNLLRPVSSGTCVATAEIIALGRTSGVARIDICNDGRAVCAAQGTVTVVAPKTSS

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15209; Mature: 15209

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFTTFNEQVAEQLKSAAETTGGLAGYLGFRHTEFAAGRLVAEMDARDDLKTPFGNLHGG
CCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHEECCCCCCCCCCCCCCCHH
CLSAMVDHCLGVVFYPVIPLGSWVATTEFKLNLLRPVSSGTCVATAEIIALGRTSGVARI
HHHHHHHHHHHHHHHHHHCCCCEEEEHEEEEEEECCCCCCCEEEHEEEEEECCCCCEEEE
DICNDGRAVCAAQGTVTVVAPKTSS
EEECCCCEEEEECCEEEEEECCCCC
>Mature Secondary Structure
MQFTTFNEQVAEQLKSAAETTGGLAGYLGFRHTEFAAGRLVAEMDARDDLKTPFGNLHGG
CCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHEECCCCCCCCCCCCCCCHH
CLSAMVDHCLGVVFYPVIPLGSWVATTEFKLNLLRPVSSGTCVATAEIIALGRTSGVARI
HHHHHHHHHHHHHHHHHHCCCCEEEEHEEEEEEECCCCCCCEEEHEEEEEECCCCCEEEE
DICNDGRAVCAAQGTVTVVAPKTSS
EEECCCCEEEEECCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA