Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

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The map label for this gene is 169629081

Identifier: 169629081

GI number: 169629081

Start: 1991713

End: 1992393

Strand: Reverse

Name: 169629081

Synonym: MAB_1994c

Alternate gene names: NA

Gene position: 1992393-1991713 (Counterclockwise)

Preceding gene: 169629082

Following gene: 169629079

Centisome position: 39.32

GC content: 62.41

Gene sequence:

>681_bases
ATGACTAGACGAGGGCGGGTGGCACGGATCACCGCCGTGCTGTTGTTGGCGACGCTTCCGCTGCTATCAGGATGCGTACG
CGTCAAGGCTTCGATGACCGTCACCACCGACGATCACGTCTCCGGCCAGCTGATCGCCGTCGCCAAACCCCAGGGCAAGA
ACGATAAGGGGCCCCAGCTCGATCGCAACATGTCCTTCGCCGAGAAGGTTCAGGTGAGCGAGTACGAAGAGAATGGCATG
GTCGGGTCGCGCGCCATCTTCAACGACCTCACCTTCTCCGAGGTCCCTCAGCTGGCAGGCATGAACAAGAACGCGGCCGG
CTTCGACCTGACCCTGCGCCGCAATGGCGACGTGGTTGTGTTGGAAGGTCGTGCCGACTTGACCGCGCTGGGCGACAACT
CGAACGCAGACGTCTCGCTGGCGGTTTCCTTCCCTGGTGATATCGAATCCACCAACGGAGAGATGCTCGGCTCGGATTCC
GTGCAGTGGAAACTCAATCCCGGTGTGGTCAGCTCCTTTACCGCCACCGCCCGCTACACCGATCCCAGCACCCGCTCGTT
CAATGGTGCCGCGATCTTCGTATCGATCGCCGCTCTGCTGGTCGGCGCCCTCGTCGCCTCCATGGCGTGGCTAGACCGCG
ACCAATCGCCGCGGTTTACCCCCGAGCAGTTCCCGGAGTAA

Upstream 100 bases:

>100_bases
CAGGAGATCCCAGGCGATTCGCGGTGTTGGGTCGTGCTTTGCCCCTGGAGCCCGGATATCGACAGCCGGGCGTGTCAGCC
GTCTGGCACGATAATCCGCG

Downstream 100 bases:

>100_bases
CCCTCACCCCGAGATTCTCCAACACCTCTGAGGTGGCCCGCGCAAAGTTGAGGGTCATGAAGTGCAGACACGGCACACCC
TCGGCCAGCAGCCGCGAAGC

Product: lipoprotein LppM

Products: NA

Alternate protein names: Lipoprotein LppM; LppM Protein

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MTRRGRVARITAVLLLATLPLLSGCVRVKASMTVTTDDHVSGQLIAVAKPQGKNDKGPQLDRNMSFAEKVQVSEYEENGM
VGSRAIFNDLTFSEVPQLAGMNKNAAGFDLTLRRNGDVVVLEGRADLTALGDNSNADVSLAVSFPGDIESTNGEMLGSDS
VQWKLNPGVVSSFTATARYTDPSTRSFNGAAIFVSIAALLVGALVASMAWLDRDQSPRFTPEQFPE

Sequences:

>Translated_226_residues
MTRRGRVARITAVLLLATLPLLSGCVRVKASMTVTTDDHVSGQLIAVAKPQGKNDKGPQLDRNMSFAEKVQVSEYEENGM
VGSRAIFNDLTFSEVPQLAGMNKNAAGFDLTLRRNGDVVVLEGRADLTALGDNSNADVSLAVSFPGDIESTNGEMLGSDS
VQWKLNPGVVSSFTATARYTDPSTRSFNGAAIFVSIAALLVGALVASMAWLDRDQSPRFTPEQFPE
>Mature_225_residues
TRRGRVARITAVLLLATLPLLSGCVRVKASMTVTTDDHVSGQLIAVAKPQGKNDKGPQLDRNMSFAEKVQVSEYEENGMV
GSRAIFNDLTFSEVPQLAGMNKNAAGFDLTLRRNGDVVVLEGRADLTALGDNSNADVSLAVSFPGDIESTNGEMLGSDSV
QWKLNPGVVSSFTATARYTDPSTRSFNGAAIFVSIAALLVGALVASMAWLDRDQSPRFTPEQFPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24155; Mature: 24023

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRGRVARITAVLLLATLPLLSGCVRVKASMTVTTDDHVSGQLIAVAKPQGKNDKGPQL
CCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCEEEEEECCCCCCCCCCCC
DRNMSFAEKVQVSEYEENGMVGSRAIFNDLTFSEVPQLAGMNKNAAGFDLTLRRNGDVVV
CCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHCCCCCCCCEEEEEECCCCEEE
LEGRADLTALGDNSNADVSLAVSFPGDIESTNGEMLGSDSVQWKLNPGVVSSFTATARYT
EECCCCEEEECCCCCCCEEEEEECCCCCCCCCCCEECCCCEEEEECCCCEEEEEEEEEEC
DPSTRSFNGAAIFVSIAALLVGALVASMAWLDRDQSPRFTPEQFPE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCC
>Mature Secondary Structure 
TRRGRVARITAVLLLATLPLLSGCVRVKASMTVTTDDHVSGQLIAVAKPQGKNDKGPQL
CCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCEEEEEECCCCCCCCCCCC
DRNMSFAEKVQVSEYEENGMVGSRAIFNDLTFSEVPQLAGMNKNAAGFDLTLRRNGDVVV
CCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHCCCCCCCCEEEEEECCCCEEE
LEGRADLTALGDNSNADVSLAVSFPGDIESTNGEMLGSDSVQWKLNPGVVSSFTATARYT
EECCCCEEEECCCCCCCEEEEEECCCCCCCCCCCEECCCCEEEEECCCCEEEEEEEEEEC
DPSTRSFNGAAIFVSIAALLVGALVASMAWLDRDQSPRFTPEQFPE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA