| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629081
Identifier: 169629081
GI number: 169629081
Start: 1991713
End: 1992393
Strand: Reverse
Name: 169629081
Synonym: MAB_1994c
Alternate gene names: NA
Gene position: 1992393-1991713 (Counterclockwise)
Preceding gene: 169629082
Following gene: 169629079
Centisome position: 39.32
GC content: 62.41
Gene sequence:
>681_bases ATGACTAGACGAGGGCGGGTGGCACGGATCACCGCCGTGCTGTTGTTGGCGACGCTTCCGCTGCTATCAGGATGCGTACG CGTCAAGGCTTCGATGACCGTCACCACCGACGATCACGTCTCCGGCCAGCTGATCGCCGTCGCCAAACCCCAGGGCAAGA ACGATAAGGGGCCCCAGCTCGATCGCAACATGTCCTTCGCCGAGAAGGTTCAGGTGAGCGAGTACGAAGAGAATGGCATG GTCGGGTCGCGCGCCATCTTCAACGACCTCACCTTCTCCGAGGTCCCTCAGCTGGCAGGCATGAACAAGAACGCGGCCGG CTTCGACCTGACCCTGCGCCGCAATGGCGACGTGGTTGTGTTGGAAGGTCGTGCCGACTTGACCGCGCTGGGCGACAACT CGAACGCAGACGTCTCGCTGGCGGTTTCCTTCCCTGGTGATATCGAATCCACCAACGGAGAGATGCTCGGCTCGGATTCC GTGCAGTGGAAACTCAATCCCGGTGTGGTCAGCTCCTTTACCGCCACCGCCCGCTACACCGATCCCAGCACCCGCTCGTT CAATGGTGCCGCGATCTTCGTATCGATCGCCGCTCTGCTGGTCGGCGCCCTCGTCGCCTCCATGGCGTGGCTAGACCGCG ACCAATCGCCGCGGTTTACCCCCGAGCAGTTCCCGGAGTAA
Upstream 100 bases:
>100_bases CAGGAGATCCCAGGCGATTCGCGGTGTTGGGTCGTGCTTTGCCCCTGGAGCCCGGATATCGACAGCCGGGCGTGTCAGCC GTCTGGCACGATAATCCGCG
Downstream 100 bases:
>100_bases CCCTCACCCCGAGATTCTCCAACACCTCTGAGGTGGCCCGCGCAAAGTTGAGGGTCATGAAGTGCAGACACGGCACACCC TCGGCCAGCAGCCGCGAAGC
Product: lipoprotein LppM
Products: NA
Alternate protein names: Lipoprotein LppM; LppM Protein
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MTRRGRVARITAVLLLATLPLLSGCVRVKASMTVTTDDHVSGQLIAVAKPQGKNDKGPQLDRNMSFAEKVQVSEYEENGM VGSRAIFNDLTFSEVPQLAGMNKNAAGFDLTLRRNGDVVVLEGRADLTALGDNSNADVSLAVSFPGDIESTNGEMLGSDS VQWKLNPGVVSSFTATARYTDPSTRSFNGAAIFVSIAALLVGALVASMAWLDRDQSPRFTPEQFPE
Sequences:
>Translated_226_residues MTRRGRVARITAVLLLATLPLLSGCVRVKASMTVTTDDHVSGQLIAVAKPQGKNDKGPQLDRNMSFAEKVQVSEYEENGM VGSRAIFNDLTFSEVPQLAGMNKNAAGFDLTLRRNGDVVVLEGRADLTALGDNSNADVSLAVSFPGDIESTNGEMLGSDS VQWKLNPGVVSSFTATARYTDPSTRSFNGAAIFVSIAALLVGALVASMAWLDRDQSPRFTPEQFPE >Mature_225_residues TRRGRVARITAVLLLATLPLLSGCVRVKASMTVTTDDHVSGQLIAVAKPQGKNDKGPQLDRNMSFAEKVQVSEYEENGMV GSRAIFNDLTFSEVPQLAGMNKNAAGFDLTLRRNGDVVVLEGRADLTALGDNSNADVSLAVSFPGDIESTNGEMLGSDSV QWKLNPGVVSSFTATARYTDPSTRSFNGAAIFVSIAALLVGALVASMAWLDRDQSPRFTPEQFPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24155; Mature: 24023
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRGRVARITAVLLLATLPLLSGCVRVKASMTVTTDDHVSGQLIAVAKPQGKNDKGPQL CCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCEEEEEECCCCCCCCCCCC DRNMSFAEKVQVSEYEENGMVGSRAIFNDLTFSEVPQLAGMNKNAAGFDLTLRRNGDVVV CCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHCCCCCCCCEEEEEECCCCEEE LEGRADLTALGDNSNADVSLAVSFPGDIESTNGEMLGSDSVQWKLNPGVVSSFTATARYT EECCCCEEEECCCCCCCEEEEEECCCCCCCCCCCEECCCCEEEEECCCCEEEEEEEEEEC DPSTRSFNGAAIFVSIAALLVGALVASMAWLDRDQSPRFTPEQFPE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCC >Mature Secondary Structure TRRGRVARITAVLLLATLPLLSGCVRVKASMTVTTDDHVSGQLIAVAKPQGKNDKGPQL CCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCEEEEEECCCCCCCCCCCC DRNMSFAEKVQVSEYEENGMVGSRAIFNDLTFSEVPQLAGMNKNAAGFDLTLRRNGDVVV CCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHCCCCCCCCEEEEEECCCCEEE LEGRADLTALGDNSNADVSLAVSFPGDIESTNGEMLGSDSVQWKLNPGVVSSFTATARYT EECCCCEEEECCCCCCCEEEEEECCCCCCCCCCCEECCCCEEEEECCCCEEEEEEEEEEC DPSTRSFNGAAIFVSIAALLVGALVASMAWLDRDQSPRFTPEQFPE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA