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The map label for this gene is qcrB [H]

Identifier: 169629053

GI number: 169629053

Start: 1963532

End: 1965172

Strand: Reverse

Name: qcrB [H]

Synonym: MAB_1966c

Alternate gene names: 169629053

Gene position: 1965172-1963532 (Counterclockwise)

Preceding gene: 169629054

Following gene: 169629052

Centisome position: 38.78

GC content: 62.89

Gene sequence:

>1641_bases
ATGAGCGACACAGCCCAAAAGCCCTCGCGCGCAGCCAAACAAGCCGAGGCGATGGATTCGCGGTATCACCTCGCTGCCGG
TATGAAGCGGCAGATCAACAAGGTCTTCCCGACCCACTGGTCGTTCATGCTCGGTGAGATCGCGCTGTACAGCTTCATCG
TTCTGCTGCTTTCGGGTGTCTATCTGACCCTGTTCTTCGACCCGTCGATGTCCGAAGTGACCTACAACGGCATCTATCAG
CCGCTGCGCGGCGTGCAGATGTCCAAGGCCTACGAGACCACCCTGAACATCAGCTTCGAGGTGCGTGGTGGTCTGTTCGT
GCGGCAGATCCATCACTGGGCGGCGCTGATGTTCGCGGCGTCGATCATGGTGCACATGGCCCGTATCTTCTTCACGGGTG
CGTTCCGGCGTCCCCGTGAGGCCAACTGGGTCATCGGCGCGCTGCTGTTCATCCTGGCGATGTTCGAAGGTTTCTTCGGA
TACTCCCTGCCCGACGACCTGCTCTCCGGCACCGGTATCCGCGCGGCGCTTTCCGGCATCACCATGGGCCTTCCGCTGAT
CGGCACCTGGATGCACTGGGCGCTGTTCGGTGGCGACTTCCCCGGCAACATCCTGATCCCCCGTCTGTACGCCATGCACA
TCCTGCTGATCCCCGCGATCATCCTGGCGCTCATCGGTATCCACCTGGCCCTGGTCTGGTACCAGAAGCACACCCAGTTC
CCCGGCCCGGGTGCGACTGAGAAGAACGTGGTGGGTGTGCGCATCCTCCCGGTGTTCGCCCTCAAGGGTGGATCCTTCTT
CGCCTTCACCACCGCCATCCTGGCGCTGATGAGCGGTCTGCTGCAGATCAACCCCATCTGGGTGCTGGGCCCCTACAAGC
CCTCACAGATCTCCGCGGGTAGCCAGCCGGACTTCTACATGATGTGGACCGACGGCCTGCTGCGCATCATCCCGGCTTGG
GAGATCTACCCGTTTGGCCACACCATCCCCCAGGCCGTGTGGGTTGCGGTCGGAATGGGCTTGGTGTTCGGTCTGCTGAT
CGCATACCCCTTCCTCGAGAAGAAGCTCACCGGTGATGATGCCCACCACAACCTGCTGCAGCGGCCGCGTGACGCTCCGG
TCAGGACGGCCATCGGCTCGGCGGCGATCTCGCTCTACATGTTGTTCACGCTCATGTGTATGAACGACATCATCGCGCTG
AAGTTCCACATCTCGCTGAACGCGACGACGTGGATCGGTCGTATCGGCATGGTCATCTTGCCGGCGGTGGTGTACTACAT
CGCCTATCGCTGGGCCATCGGCCTGCAGCGCAGCGATCGCGCGGTGCTGGAGCACGGCATCGAGACCGGCATCATCAAGC
GCCTGCCGCACGGTGAGTACATCGAGATCCACCAGCCGCTGGCCGGAGTCGATGAGCACGGCCATGCGATTCCGCTGGAG
TACCAGGGGGCACCGGTGCCTCAGCGCATGAACAAGCTCGGGTCCGCCGGAGCACCGGGCACCGGCTCGTTCCTGTTCGC
CGACCCCGCCGACGAACAACACGCACTGGCCGAAGCCGAACACGAGGCGCACCACAAGTCACTACTCGCGCTGAAGGAGT
ACCAGGACGGCGAGCCGTCGACCAACGGTCACGGCCACTAG

Upstream 100 bases:

>100_bases
CGCTGGCACAGCTGCCCCTCACCGTCGACAAGGACGGATACCTCGTCGCCAACGGCGACTTCGTTGAACCCGTCGGACCC
GCATTCTGGGAGCGCAAATC

Downstream 100 bases:

>100_bases
AAGGCAGCTCTGACAGGTGCGCCCCGCATGCGAAAGCGTGCGGGGCGCACCTGTTTTAGGGTGGCTGTATGCGTGAGATG
AGCCGAGAGGAATGGTGGGC

Product: ubiquinol-cytochrome c reductase cytochrome b subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 546; Mature: 545

Protein sequence:

>546_residues
MSDTAQKPSRAAKQAEAMDSRYHLAAGMKRQINKVFPTHWSFMLGEIALYSFIVLLLSGVYLTLFFDPSMSEVTYNGIYQ
PLRGVQMSKAYETTLNISFEVRGGLFVRQIHHWAALMFAASIMVHMARIFFTGAFRRPREANWVIGALLFILAMFEGFFG
YSLPDDLLSGTGIRAALSGITMGLPLIGTWMHWALFGGDFPGNILIPRLYAMHILLIPAIILALIGIHLALVWYQKHTQF
PGPGATEKNVVGVRILPVFALKGGSFFAFTTAILALMSGLLQINPIWVLGPYKPSQISAGSQPDFYMMWTDGLLRIIPAW
EIYPFGHTIPQAVWVAVGMGLVFGLLIAYPFLEKKLTGDDAHHNLLQRPRDAPVRTAIGSAAISLYMLFTLMCMNDIIAL
KFHISLNATTWIGRIGMVILPAVVYYIAYRWAIGLQRSDRAVLEHGIETGIIKRLPHGEYIEIHQPLAGVDEHGHAIPLE
YQGAPVPQRMNKLGSAGAPGTGSFLFADPADEQHALAEAEHEAHHKSLLALKEYQDGEPSTNGHGH

Sequences:

>Translated_546_residues
MSDTAQKPSRAAKQAEAMDSRYHLAAGMKRQINKVFPTHWSFMLGEIALYSFIVLLLSGVYLTLFFDPSMSEVTYNGIYQ
PLRGVQMSKAYETTLNISFEVRGGLFVRQIHHWAALMFAASIMVHMARIFFTGAFRRPREANWVIGALLFILAMFEGFFG
YSLPDDLLSGTGIRAALSGITMGLPLIGTWMHWALFGGDFPGNILIPRLYAMHILLIPAIILALIGIHLALVWYQKHTQF
PGPGATEKNVVGVRILPVFALKGGSFFAFTTAILALMSGLLQINPIWVLGPYKPSQISAGSQPDFYMMWTDGLLRIIPAW
EIYPFGHTIPQAVWVAVGMGLVFGLLIAYPFLEKKLTGDDAHHNLLQRPRDAPVRTAIGSAAISLYMLFTLMCMNDIIAL
KFHISLNATTWIGRIGMVILPAVVYYIAYRWAIGLQRSDRAVLEHGIETGIIKRLPHGEYIEIHQPLAGVDEHGHAIPLE
YQGAPVPQRMNKLGSAGAPGTGSFLFADPADEQHALAEAEHEAHHKSLLALKEYQDGEPSTNGHGH
>Mature_545_residues
SDTAQKPSRAAKQAEAMDSRYHLAAGMKRQINKVFPTHWSFMLGEIALYSFIVLLLSGVYLTLFFDPSMSEVTYNGIYQP
LRGVQMSKAYETTLNISFEVRGGLFVRQIHHWAALMFAASIMVHMARIFFTGAFRRPREANWVIGALLFILAMFEGFFGY
SLPDDLLSGTGIRAALSGITMGLPLIGTWMHWALFGGDFPGNILIPRLYAMHILLIPAIILALIGIHLALVWYQKHTQFP
GPGATEKNVVGVRILPVFALKGGSFFAFTTAILALMSGLLQINPIWVLGPYKPSQISAGSQPDFYMMWTDGLLRIIPAWE
IYPFGHTIPQAVWVAVGMGLVFGLLIAYPFLEKKLTGDDAHHNLLQRPRDAPVRTAIGSAAISLYMLFTLMCMNDIIALK
FHISLNATTWIGRIGMVILPAVVYYIAYRWAIGLQRSDRAVLEHGIETGIIKRLPHGEYIEIHQPLAGVDEHGHAIPLEY
QGAPVPQRMNKLGSAGAPGTGSFLFADPADEQHALAEAEHEAHHKSLLALKEYQDGEPSTNGHGH

Specific function: Unknown

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60399; Mature: 60268

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: PS51002 CYTB_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTAQKPSRAAKQAEAMDSRYHLAAGMKRQINKVFPTHWSFMLGEIALYSFIVLLLSGV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
YLTLFFDPSMSEVTYNGIYQPLRGVQMSKAYETTLNISFEVRGGLFVRQIHHWAALMFAA
EEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHHH
SIMVHMARIFFTGAFRRPREANWVIGALLFILAMFEGFFGYSLPDDLLSGTGIRAALSGI
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHH
TMGLPLIGTWMHWALFGGDFPGNILIPRLYAMHILLIPAIILALIGIHLALVWYQKHTQF
HHCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PGPGATEKNVVGVRILPVFALKGGSFFAFTTAILALMSGLLQINPIWVLGPYKPSQISAG
CCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHEECCEEEECCCCCCCCCCC
SQPDFYMMWTDGLLRIIPAWEIYPFGHTIPQAVWVAVGMGLVFGLLIAYPFLEKKLTGDD
CCCCEEEEECCCHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
AHHNLLQRPRDAPVRTAIGSAAISLYMLFTLMCMNDIIALKFHISLNATTWIGRIGMVIL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCHHHHHHHHHHHH
PAVVYYIAYRWAIGLQRSDRAVLEHGIETGIIKRLPHGEYIEIHQPLAGVDEHGHAIPLE
HHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEE
YQGAPVPQRMNKLGSAGAPGTGSFLFADPADEQHALAEAEHEAHHKSLLALKEYQDGEPS
CCCCCCHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TNGHGH
CCCCCC
>Mature Secondary Structure 
SDTAQKPSRAAKQAEAMDSRYHLAAGMKRQINKVFPTHWSFMLGEIALYSFIVLLLSGV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
YLTLFFDPSMSEVTYNGIYQPLRGVQMSKAYETTLNISFEVRGGLFVRQIHHWAALMFAA
EEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHHH
SIMVHMARIFFTGAFRRPREANWVIGALLFILAMFEGFFGYSLPDDLLSGTGIRAALSGI
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHH
TMGLPLIGTWMHWALFGGDFPGNILIPRLYAMHILLIPAIILALIGIHLALVWYQKHTQF
HHCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PGPGATEKNVVGVRILPVFALKGGSFFAFTTAILALMSGLLQINPIWVLGPYKPSQISAG
CCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHEECCEEEECCCCCCCCCCC
SQPDFYMMWTDGLLRIIPAWEIYPFGHTIPQAVWVAVGMGLVFGLLIAYPFLEKKLTGDD
CCCCEEEEECCCHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
AHHNLLQRPRDAPVRTAIGSAAISLYMLFTLMCMNDIIALKFHISLNATTWIGRIGMVIL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCHHHHHHHHHHHH
PAVVYYIAYRWAIGLQRSDRAVLEHGIETGIIKRLPHGEYIEIHQPLAGVDEHGHAIPLE
HHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEE
YQGAPVPQRMNKLGSAGAPGTGSFLFADPADEQHALAEAEHEAHHKSLLALKEYQDGEPS
CCCCCCHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TNGHGH
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11234002; 2181404 [H]