| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629052
Identifier: 169629052
GI number: 169629052
Start: 1963026
End: 1963463
Strand: Reverse
Name: 169629052
Synonym: MAB_1965c
Alternate gene names: NA
Gene position: 1963463-1963026 (Counterclockwise)
Preceding gene: 169629053
Following gene: 169629047
Centisome position: 38.75
GC content: 64.84
Gene sequence:
>438_bases ATGCGTGAGATGAGCCGAGAGGAATGGTGGGCCTTCGCCTCTGCGGGAACCCGTACCGGAATGCTCGGTCTGGTCCGTGC CAACGGCGCACCCATCGTCACACCCGTCTGGTTCGTACTGCATGAGGGACCCGAGGGAGACGAGCTGATCTTCAACACGG GAACCAACACACTGAAGGGCAAAGCGATTCGGCGCGACCCACGCATCTCGCTGGCGGTCGATGATCAGCGGCCGCCGTTC TCCTATGTGCAGTTCACCGCAGAGGCGCGGCTGACCAACGATCACGACGAGATGCTCGCCTGGGCGACCGCCATCGGCGG ACGCTACATGGGCGCCGACAAAGCCGAGGAGTTCGGCCGGCGCAACGCGGTGCCCGAGGAGTCACTCGTCCGGGCGAAAA TCACCACGGTGATCGCCCGCGCCGGCATCGCGGACTAA
Upstream 100 bases:
>100_bases GCGAGCCGTCGACCAACGGTCACGGCCACTAGAAGGCAGCTCTGACAGGTGCGCCCCGCATGCGAAAGCGTGCGGGGCGC ACCTGTTTTAGGGTGGCTGT
Downstream 100 bases:
>100_bases GACCCTGACGAGCCGAGCTCGCGCAGCTTCTTGAGCGTCACCCACGGAATGGCCCCCATCGCGCAGGTGATCACACCGGC GAAGACGAACGCGATGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: PPOX Class; Pyridoxamine 5-Phosphate Oxidase-Related Protein; Pyridoxal 5-Phosphate Synthase
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MREMSREEWWAFASAGTRTGMLGLVRANGAPIVTPVWFVLHEGPEGDELIFNTGTNTLKGKAIRRDPRISLAVDDQRPPF SYVQFTAEARLTNDHDEMLAWATAIGGRYMGADKAEEFGRRNAVPEESLVRAKITTVIARAGIAD
Sequences:
>Translated_145_residues MREMSREEWWAFASAGTRTGMLGLVRANGAPIVTPVWFVLHEGPEGDELIFNTGTNTLKGKAIRRDPRISLAVDDQRPPF SYVQFTAEARLTNDHDEMLAWATAIGGRYMGADKAEEFGRRNAVPEESLVRAKITTVIARAGIAD >Mature_145_residues MREMSREEWWAFASAGTRTGMLGLVRANGAPIVTPVWFVLHEGPEGDELIFNTGTNTLKGKAIRRDPRISLAVDDQRPPF SYVQFTAEARLTNDHDEMLAWATAIGGRYMGADKAEEFGRRNAVPEESLVRAKITTVIARAGIAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16034; Mature: 16034
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREMSREEWWAFASAGTRTGMLGLVRANGAPIVTPVWFVLHEGPEGDELIFNTGTNTLKG CCCCCCHHHEEECCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCC KAIRRDPRISLAVDDQRPPFSYVQFTAEARLTNDHDEMLAWATAIGGRYMGADKAEEFGR CEECCCCCEEEEECCCCCCHHHEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHH RNAVPEESLVRAKITTVIARAGIAD CCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MREMSREEWWAFASAGTRTGMLGLVRANGAPIVTPVWFVLHEGPEGDELIFNTGTNTLKG CCCCCCHHHEEECCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCC KAIRRDPRISLAVDDQRPPFSYVQFTAEARLTNDHDEMLAWATAIGGRYMGADKAEEFGR CEECCCCCEEEEECCCCCCHHHEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHH RNAVPEESLVRAKITTVIARAGIAD CCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA