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The map label for this gene is mmpS3 [H]

Identifier: 169629050

GI number: 169629050

Start: 1961441

End: 1962307

Strand: Direct

Name: mmpS3 [H]

Synonym: MAB_1963

Alternate gene names: 169629050

Gene position: 1961441-1962307 (Clockwise)

Preceding gene: 169629049

Following gene: 169629051

Centisome position: 38.71

GC content: 66.9

Gene sequence:

>867_bases
ATGAGTGGGACGGACAACCCAGGGTCGGGGAATCCCGGGGAAGTTCCGGATCTGGACGGTCCGAATGAGGAAGCTGCGGC
TCCCGACTCTTCCGGGGCGGATTCTGCCGCGTTTCATTCTCAGGCGTACTCGGCGCCCGAATCCGAGCAATTCACCAGCC
CATACGTGCCCTACGACGAGTACGAGACCCAACTCGTCGATGGCGAGGAGCCGCCGCCGCCGCGGTGGCCGTGGGTCGTC
GGCGTGGCAGCGATCATCGCCGCCATCACCCTGGTCGCCTCCGTTGCTTTGCTCGTCGCGGGCCGTTCGGATGAGACCAA
CGGTGCGGCCAAGAGCAGCACGGTGATACCAACGCCGAGCACCACGCCGTGGAACGAGATCATCACCACCACGACCCCGC
CGCCCCCACCGCCGCCGCCTCCACCGACCACCGAGCCGCCGCCTCCTCCGCCTCCGCCGGTGGTGACCGAGACGGTGACG
GTGGAGCCGCCACCGCCGCCCCCTCCGCCGGTGACGACGCATGAGGCGCCGCCGCCGGTGACCACCACGACGACACCGCC
GCCGCCTCCGCCCCCGACTACCACGACACCGGCCGGGCCACGGCAGATCACGTACTCGGTGACCGGTTCCAAGGCTCCGC
TCGATCGCATCTCGATCACCTGGACCGACGGTTCGGGACGCACCCGGGTGAACCCGAATGTGTACATCCCGTGGTCGATC
ACGGTTACCCCCATTTCGAATTCGGAGATCGGATCGGTGTCGGCGAGTAGCTTCCTGCGGCTGAGTCAGCTCAACTGCAC
GATCACCACCAGCGACGGTCAGGTTTTGTCCTCCAACAACAACAATTCGGCGCAGGCAACCTGCTGA

Upstream 100 bases:

>100_bases
CGGGATTCGTCGCCCCGGATTGCGTTGGCTATCGTTGCCATGGCCCCTCAGGCAGGTGGCTCGCCGGGGAGCGGGAAGTG
ACGAAAAGGAACTTGTGTAG

Downstream 100 bases:

>100_bases
TGCCAGCAGGTCGATTGGCCAAGCCACTGGAGGCAATCGCGGGCCCGCTGCGGCGGTCATCGCCGGAGTCCGTTGACCGG
ATGCTCATCGGCTTGTGCGC

Product: MmpS family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MSGTDNPGSGNPGEVPDLDGPNEEAAAPDSSGADSAAFHSQAYSAPESEQFTSPYVPYDEYETQLVDGEEPPPPRWPWVV
GVAAIIAAITLVASVALLVAGRSDETNGAAKSSTVIPTPSTTPWNEIITTTTPPPPPPPPPPTTEPPPPPPPPVVTETVT
VEPPPPPPPPVTTHEAPPPVTTTTTPPPPPPPTTTTPAGPRQITYSVTGSKAPLDRISITWTDGSGRTRVNPNVYIPWSI
TVTPISNSEIGSVSASSFLRLSQLNCTITTSDGQVLSSNNNNSAQATC

Sequences:

>Translated_288_residues
MSGTDNPGSGNPGEVPDLDGPNEEAAAPDSSGADSAAFHSQAYSAPESEQFTSPYVPYDEYETQLVDGEEPPPPRWPWVV
GVAAIIAAITLVASVALLVAGRSDETNGAAKSSTVIPTPSTTPWNEIITTTTPPPPPPPPPPTTEPPPPPPPPVVTETVT
VEPPPPPPPPVTTHEAPPPVTTTTTPPPPPPPTTTTPAGPRQITYSVTGSKAPLDRISITWTDGSGRTRVNPNVYIPWSI
TVTPISNSEIGSVSASSFLRLSQLNCTITTSDGQVLSSNNNNSAQATC
>Mature_287_residues
SGTDNPGSGNPGEVPDLDGPNEEAAAPDSSGADSAAFHSQAYSAPESEQFTSPYVPYDEYETQLVDGEEPPPPRWPWVVG
VAAIIAAITLVASVALLVAGRSDETNGAAKSSTVIPTPSTTPWNEIITTTTPPPPPPPPPPTTEPPPPPPPPVVTETVTV
EPPPPPPPPVTTHEAPPPVTTTTTPPPPPPPTTTTPAGPRQITYSVTGSKAPLDRISITWTDGSGRTRVNPNVYIPWSIT
VTPISNSEIGSVSASSFLRLSQLNCTITTSDGQVLSSNNNNSAQATC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008693 [H]

Pfam domain/function: PF05423 Mycobact_memb [H]

EC number: NA

Molecular weight: Translated: 29777; Mature: 29646

Theoretical pI: Translated: 3.88; Mature: 3.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGTDNPGSGNPGEVPDLDGPNEEAAAPDSSGADSAAFHSQAYSAPESEQFTSPYVPYDE
CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
YETQLVDGEEPPPPRWPWVVGVAAIIAAITLVASVALLVAGRSDETNGAAKSSTVIPTPS
CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCC
TTPWNEIITTTTPPPPPPPPPPTTEPPPPPPPPVVTETVTVEPPPPPPPPVTTHEAPPPV
CCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC
TTTTTPPPPPPPTTTTPAGPRQITYSVTGSKAPLDRISITWTDGSGRTRVNPNVYIPWSI
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCEEECCCEEEEEEE
TVTPISNSEIGSVSASSFLRLSQLNCTITTSDGQVLSSNNNNSAQATC
EEEECCCCCCCCCCHHHHEEEEECEEEEECCCCEEEECCCCCCCCCCC
>Mature Secondary Structure 
SGTDNPGSGNPGEVPDLDGPNEEAAAPDSSGADSAAFHSQAYSAPESEQFTSPYVPYDE
CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
YETQLVDGEEPPPPRWPWVVGVAAIIAAITLVASVALLVAGRSDETNGAAKSSTVIPTPS
CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCC
TTPWNEIITTTTPPPPPPPPPPTTEPPPPPPPPVVTETVTVEPPPPPPPPVTTHEAPPPV
CCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC
TTTTTPPPPPPPTTTTPAGPRQITYSVTGSKAPLDRISITWTDGSGRTRVNPNVYIPWSI
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCEEECCCEEEEEEE
TVTPISNSEIGSVSASSFLRLSQLNCTITTSDGQVLSSNNNNSAQATC
EEEECCCCCCCCCCHHHHEEEEECEEEEECCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]