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The map label for this gene is yfcH [C]

Identifier: 169629031

GI number: 169629031

Start: 1942352

End: 1943275

Strand: Reverse

Name: yfcH [C]

Synonym: MAB_1944c

Alternate gene names: 169629031

Gene position: 1943275-1942352 (Counterclockwise)

Preceding gene: 169629032

Following gene: 169629030

Centisome position: 38.35

GC content: 69.05

Gene sequence:

>924_bases
ATGGGCGCTGAATCCCAGCACAAGCGGATCGTCATCGCCGGATCGTCGGGGGTGATCGGGTCGGCACTTGTCGCGTCGCT
GCGTTCCGCGAACCACACCGTGGTCCGCCTGGTTCGCCGCGACCCGATGGGCCCCGACGAGCGGCGCTGGGATCCAGCAA
GCGGCCAGATCGAGCCCGGCGGCCTCGACGGCGCCGACGCCGTCGTCAACATGTGCGGGGTCGGTGTCGGCGACAAACGG
TGGTCGGGCGCCTACAAGCAGGAGATCTACGACAGCCGCGTCATCCCGACCGAGGTACTGGCACGGGCCGTCGCCGAGGC
CGGGGTGCCGGTCCTGATCAACGCCTCGGCGGTGGGCTACTACGGCGACAGCGGTGACCGCATCATCGACGAAACCGCCT
CCAGCGGCACCAGTTTCCTGGCACGGGTGTGTCTCGACTGGGAGGCCGCAACCGCCGAGGCCGCGCAGGCAGGCGCCCGG
GTGGTGATCGTCCGCACGGGGCTGGTGCTGTCTCCCGCCGGTGGGCTCTTCGGCCGGTCCCGGCCGCTGTTCTCCCTCGG
CCTGGGGGCGCGGCTGGGCAACGGACGCTGGTACATGCCCTGGATAAGCCTCGAGGACCACATTCGTGCCCTCGAGTTCG
CGCTCGCCGAACCGGCCGTGTCGGGTCCGGTCAACCTGACCGGACCCGCGCCGGTGACGAACGCAGAATTCACCGCGGCC
CTCGGCCGCGTCCTGCATCGACCCACCCTGCTGGTGGCCCCCCAGTTCGCGCTGAGCCTCATCTTCGGAGAGTTCGCCGA
CGCCGAACTGACCAGCAGCATGCGTGTCATCCCCGCCGTGTTGGAACAGCACGGATTCGAATTCGAGCACCACACCATCG
GCGAGGCGCTGGCCTACGCCAACAACAGTCGACCGATGAAGTGA

Upstream 100 bases:

>100_bases
CACCGCCTGATCGACGGAGCCGACGCGGGGCGGTTCCTGACGACCATCAAACACCGTCTGGAAGAGGGGGCTTTCGAGGC
GGACCTGGGTCTGTAGGCCT

Downstream 100 bases:

>100_bases
GATAATGGAACCCGTGCACCGCTCCCATGGATCCATCCGGTCCAGCGCAGCCCCCGTCGAGGTACGGGATCTGGGCGTGA
TCGACTACGAGATGGCATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MGAESQHKRIVIAGSSGVIGSALVASLRSANHTVVRLVRRDPMGPDERRWDPASGQIEPGGLDGADAVVNMCGVGVGDKR
WSGAYKQEIYDSRVIPTEVLARAVAEAGVPVLINASAVGYYGDSGDRIIDETASSGTSFLARVCLDWEAATAEAAQAGAR
VVIVRTGLVLSPAGGLFGRSRPLFSLGLGARLGNGRWYMPWISLEDHIRALEFALAEPAVSGPVNLTGPAPVTNAEFTAA
LGRVLHRPTLLVAPQFALSLIFGEFADAELTSSMRVIPAVLEQHGFEFEHHTIGEALAYANNSRPMK

Sequences:

>Translated_307_residues
MGAESQHKRIVIAGSSGVIGSALVASLRSANHTVVRLVRRDPMGPDERRWDPASGQIEPGGLDGADAVVNMCGVGVGDKR
WSGAYKQEIYDSRVIPTEVLARAVAEAGVPVLINASAVGYYGDSGDRIIDETASSGTSFLARVCLDWEAATAEAAQAGAR
VVIVRTGLVLSPAGGLFGRSRPLFSLGLGARLGNGRWYMPWISLEDHIRALEFALAEPAVSGPVNLTGPAPVTNAEFTAA
LGRVLHRPTLLVAPQFALSLIFGEFADAELTSSMRVIPAVLEQHGFEFEHHTIGEALAYANNSRPMK
>Mature_306_residues
GAESQHKRIVIAGSSGVIGSALVASLRSANHTVVRLVRRDPMGPDERRWDPASGQIEPGGLDGADAVVNMCGVGVGDKRW
SGAYKQEIYDSRVIPTEVLARAVAEAGVPVLINASAVGYYGDSGDRIIDETASSGTSFLARVCLDWEAATAEAAQAGARV
VIVRTGLVLSPAGGLFGRSRPLFSLGLGARLGNGRWYMPWISLEDHIRALEFALAEPAVSGPVNLTGPAPVTNAEFTAAL
GRVLHRPTLLVAPQFALSLIFGEFADAELTSSMRVIPAVLEQHGFEFEHHTIGEALAYANNSRPMK

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=294, Percent_Identity=32.9931972789116, Blast_Score=137, Evalue=1e-32,
Organism=Escherichia coli, GI1788642, Length=297, Percent_Identity=36.3636363636364, Blast_Score=189, Evalue=2e-49,
Organism=Drosophila melanogaster, GI28573846, Length=296, Percent_Identity=30.4054054054054, Blast_Score=147, Evalue=7e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 32466; Mature: 32335

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAESQHKRIVIAGSSGVIGSALVASLRSANHTVVRLVRRDPMGPDERRWDPASGQIEPG
CCCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHEEHEEHHCCCCCCCCCCCCCCCCCCCC
GLDGADAVVNMCGVGVGDKRWSGAYKQEIYDSRVIPTEVLARAVAEAGVPVLINASAVGY
CCCHHHHHHHHHCCCCCCHHCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCEEEE
YGDSGDRIIDETASSGTSFLARVCLDWEAATAEAAQAGARVVIVRTGLVLSPAGGLFGRS
ECCCCCEEHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCEEEEEECCEEECCCCCCCCCC
RPLFSLGLGARLGNGRWYMPWISLEDHIRALEFALAEPAVSGPVNLTGPAPVTNAEFTAA
CCCEEECCCCEECCCEEEEEEECHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHH
LGRVLHRPTLLVAPQFALSLIFGEFADAELTSSMRVIPAVLEQHGFEFEHHTIGEALAYA
HHHHHHCCEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
NNSRPMK
CCCCCCC
>Mature Secondary Structure 
GAESQHKRIVIAGSSGVIGSALVASLRSANHTVVRLVRRDPMGPDERRWDPASGQIEPG
CCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHEEHEEHHCCCCCCCCCCCCCCCCCCCC
GLDGADAVVNMCGVGVGDKRWSGAYKQEIYDSRVIPTEVLARAVAEAGVPVLINASAVGY
CCCHHHHHHHHHCCCCCCHHCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCEEEE
YGDSGDRIIDETASSGTSFLARVCLDWEAATAEAAQAGARVVIVRTGLVLSPAGGLFGRS
ECCCCCEEHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCEEEEEECCEEECCCCCCCCCC
RPLFSLGLGARLGNGRWYMPWISLEDHIRALEFALAEPAVSGPVNLTGPAPVTNAEFTAA
CCCEEECCCCEECCCEEEEEEECHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHH
LGRVLHRPTLLVAPQFALSLIFGEFADAELTSSMRVIPAVLEQHGFEFEHHTIGEALAYA
HHHHHHCCEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
NNSRPMK
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]