Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

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The map label for this gene is 169628991

Identifier: 169628991

GI number: 169628991

Start: 1900164

End: 1901303

Strand: Direct

Name: 169628991

Synonym: MAB_1903

Alternate gene names: NA

Gene position: 1900164-1901303 (Clockwise)

Preceding gene: 169628990

Following gene: 169628992

Centisome position: 37.5

GC content: 67.89

Gene sequence:

>1140_bases
GTGGGTGTGCGGCTCGCGGACATCATCGGCGTGCTCGACGCGGCCTATCCGCCGGCGCTGGCCGAATCGTGGGATTCGGT
GGGCTTGGTCTGCGGCGACCCGGATCAGCAGATCGACACCGTGACGGTTGCCGTTGATGCAACTGCCGCGGTGGTGGACG
AAATGGACGGCCCCGGTGCGCATCTGCTGCTGGCTCATCACCCCTTGCTGCTGCGCGGCGTGGACACGGTGGCGGCCAGC
ACGCCCAAGGGCGCGCTGGTTCATCGTCTCATCCGTGCGGGCGGCGCGCTGTTCACCGCGCATACCAACGCGGACTCGGC
CAGCCCTGGTGTGTCGGACGCGCTGGCGCAAGCCCTCGGGCTGACGGTCACCTCGGTGTTGGCCCCTCGGTTCACCGACT
ACGACAAGTGGGTCGTGTTCGTGCCCACCGAATCTGTGCACGCCGTGCGGCGGGCCATGTTCGAGGCCGGTGCCGGACAT
ATCGGTGCCTACTCGGATTGTTCATGGAGTGTCACCGGCACCGGCCAATTCCGGCCGTTGGCGGGCTCCGATCCCGCTGT
AGGGGAGCATGGTGTGGTGGAACAGGTCGTCGAGGACCGCGTGGAGATGGTTGCCCCGTCGCGGCTGCGTTGCGAGCTTT
TTGCGGCGATTCAGGCCGCCCACCCCTACGAGGTTCCGGCCATCGACGTGCTGCCCATGGCGCCGGCGCCGTCCGGCACC
GGCCTGGGGCGGATAGGCGCCCTACCCACGCCGGAGACCTTGCGCGACTTCGTATCCCGTGTTCGAGGTGCCTTGCCTGA
GACTGTGTGGGGGGTGCGGGCCGCTGGCGACCCCGACGAGTTGATCCAGACCGTCGCGGTCTGCGGTGGCGCCGGTGACT
CGCTGCTGGGCGCGGCGGTCAAGTCGGGAGCGGACGTCTACGTCACCGCCGATCTGCGGCACCATCCGGCGGACGAACAT
GCCCGGACAAGTAGCGTCGCACTCGTCGACGTCGCGCATTGGGCCAGTGAATTCCCATGGTGCGCGCAGGCGGCGCGCGT
ACTCGACACCGAGTTCGGGGAGAATCTGTCGACGCGCATCTCACCGGTACGCACCGATCCCTGGACGCTGGGCGGCCCAG
AGAAAGAAGAAAAAGCATGA

Upstream 100 bases:

>100_bases
GGCGTTGCGACACCTTTGTCGGGCTGGACGGCGACTACCTACGGGTGGCGGTGCGACCGGAATGGCCGGAGCTGGTGCAA
GCGATGAAGGAGATCTTGTA

Downstream 100 bases:

>100_bases
AAGCCGATGTGGCACAACAACGCCTATTAGTGGATCTGGCGTCGGTGGATGCCGAGTTGACACGTGTCGCGCACCGGCGC
GCAAACCCGCCCGAACGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MGVRLADIIGVLDAAYPPALAESWDSVGLVCGDPDQQIDTVTVAVDATAAVVDEMDGPGAHLLLAHHPLLLRGVDTVAAS
TPKGALVHRLIRAGGALFTAHTNADSASPGVSDALAQALGLTVTSVLAPRFTDYDKWVVFVPTESVHAVRRAMFEAGAGH
IGAYSDCSWSVTGTGQFRPLAGSDPAVGEHGVVEQVVEDRVEMVAPSRLRCELFAAIQAAHPYEVPAIDVLPMAPAPSGT
GLGRIGALPTPETLRDFVSRVRGALPETVWGVRAAGDPDELIQTVAVCGGAGDSLLGAAVKSGADVYVTADLRHHPADEH
ARTSSVALVDVAHWASEFPWCAQAARVLDTEFGENLSTRISPVRTDPWTLGGPEKEEKA

Sequences:

>Translated_379_residues
MGVRLADIIGVLDAAYPPALAESWDSVGLVCGDPDQQIDTVTVAVDATAAVVDEMDGPGAHLLLAHHPLLLRGVDTVAAS
TPKGALVHRLIRAGGALFTAHTNADSASPGVSDALAQALGLTVTSVLAPRFTDYDKWVVFVPTESVHAVRRAMFEAGAGH
IGAYSDCSWSVTGTGQFRPLAGSDPAVGEHGVVEQVVEDRVEMVAPSRLRCELFAAIQAAHPYEVPAIDVLPMAPAPSGT
GLGRIGALPTPETLRDFVSRVRGALPETVWGVRAAGDPDELIQTVAVCGGAGDSLLGAAVKSGADVYVTADLRHHPADEH
ARTSSVALVDVAHWASEFPWCAQAARVLDTEFGENLSTRISPVRTDPWTLGGPEKEEKA
>Mature_378_residues
GVRLADIIGVLDAAYPPALAESWDSVGLVCGDPDQQIDTVTVAVDATAAVVDEMDGPGAHLLLAHHPLLLRGVDTVAAST
PKGALVHRLIRAGGALFTAHTNADSASPGVSDALAQALGLTVTSVLAPRFTDYDKWVVFVPTESVHAVRRAMFEAGAGHI
GAYSDCSWSVTGTGQFRPLAGSDPAVGEHGVVEQVVEDRVEMVAPSRLRCELFAAIQAAHPYEVPAIDVLPMAPAPSGTG
LGRIGALPTPETLRDFVSRVRGALPETVWGVRAAGDPDELIQTVAVCGGAGDSLLGAAVKSGADVYVTADLRHHPADEHA
RTSSVALVDVAHWASEFPWCAQAARVLDTEFGENLSTRISPVRTDPWTLGGPEKEEKA

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678
- InterPro:   IPR017221 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 39539; Mature: 39408

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVRLADIIGVLDAAYPPALAESWDSVGLVCGDPDQQIDTVTVAVDATAAVVDEMDGPGA
CCCHHHHHHHHHHCCCCCHHHHCCCCCEEEECCCCCCEEEEEEEECHHHHHHHCCCCCCC
HLLLAHHPLLLRGVDTVAASTPKGALVHRLIRAGGALFTAHTNADSASPGVSDALAQALG
EEEEECCCCCEECHHHHHCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHH
LTVTSVLAPRFTDYDKWVVFVPTESVHAVRRAMFEAGAGHIGAYSDCSWSVTGTGQFRPL
HHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCC
AGSDPAVGEHGVVEQVVEDRVEMVAPSRLRCELFAAIQAAHPYEVPAIDVLPMAPAPSGT
CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC
GLGRIGALPTPETLRDFVSRVRGALPETVWGVRAAGDPDELIQTVAVCGGAGDSLLGAAV
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH
KSGADVYVTADLRHHPADEHARTSSVALVDVAHWASEFPWCAQAARVLDTEFGENLSTRI
HCCCCEEEEECCCCCCCCHHHCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCHHCC
SPVRTDPWTLGGPEKEEKA
CCCCCCCCCCCCCCHHCCC
>Mature Secondary Structure 
GVRLADIIGVLDAAYPPALAESWDSVGLVCGDPDQQIDTVTVAVDATAAVVDEMDGPGA
CCHHHHHHHHHHCCCCCHHHHCCCCCEEEECCCCCCEEEEEEEECHHHHHHHCCCCCCC
HLLLAHHPLLLRGVDTVAASTPKGALVHRLIRAGGALFTAHTNADSASPGVSDALAQALG
EEEEECCCCCEECHHHHHCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHH
LTVTSVLAPRFTDYDKWVVFVPTESVHAVRRAMFEAGAGHIGAYSDCSWSVTGTGQFRPL
HHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCC
AGSDPAVGEHGVVEQVVEDRVEMVAPSRLRCELFAAIQAAHPYEVPAIDVLPMAPAPSGT
CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC
GLGRIGALPTPETLRDFVSRVRGALPETVWGVRAAGDPDELIQTVAVCGGAGDSLLGAAV
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH
KSGADVYVTADLRHHPADEHARTSSVALVDVAHWASEFPWCAQAARVLDTEFGENLSTRI
HCCCCEEEEECCCCCCCCHHHCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCHHCC
SPVRTDPWTLGGPEKEEKA
CCCCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]