| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628908
Identifier: 169628908
GI number: 169628908
Start: 1819188
End: 1819850
Strand: Reverse
Name: 169628908
Synonym: MAB_1819c
Alternate gene names: NA
Gene position: 1819850-1819188 (Counterclockwise)
Preceding gene: 169628909
Following gene: 169628906
Centisome position: 35.91
GC content: 58.37
Gene sequence:
>663_bases ATGAGCCGGCCGACGGAATTGTCGACAGACGAAGTTGACGGGTTGATAGCGATCGGGCTAGCCCACGATTTCTGGCGCGG CCAGTGGTCAACCGTCGAAGAGGCACACATCCACAGACCTCCGCACAGAATACGGCGAATCAGCGACGGAGAGATGTTCG CGGCCAACATCAAGGTCACACGAATCATGTTGGAAGAGTTCAGATCAGGTTTCGACCTGGAACGCGTCGTTCAACGGTTG ACGGAACCTGGTCAGCTGCGCGTTGGACGTTGGGAAGGCACAGAGCTGTGCCATCGCGATGTCACTGACCTGCTAGGACC GTACTACGAAGAGTGGTGCGGCGCGGTTCAGAAGAAGGCGGAATGGATTTCAAACCAGATCTCCGAGGACGGGCTGAGGG AAGTACTGGTGAAGTACGTGACCTTCGCGAACCTGGTTGCGCCGCATTGGTGGAGCGGCCCGGATTGGCCCGAGATGGTC ACGGCCTTTCTCGACACAGTCGATGAACTACCGCCAGGACTGCCGCCTGCGCTGCAAGACCGAGACGTCATGCACCGCAT CCTCCTGTCGAGCCCTGATTCTCTCGGTACTGAAGCTCTCGAATGGCTTGTCTGTAAGGGGCTCAGGAAGACGCTGATGC GCTCCGACCACCTCGACGATTGA
Upstream 100 bases:
>100_bases CAGGCGAGCCCGTACTGACAATCGCGAACACACTCGGTGTGAGCCGGGCAACGGTCTATCGGGTGCTGGCCGAGGATCTT CACGCAGGTAAGGAGGACCA
Downstream 100 bases:
>100_bases CTTCCTGCCTCTAGAGTGTCTCTACTTCGTCGCCTGGGGGGGCACCCTGAAGCCGTTGTTACACCAGACACTCACGCAAA TCCGGCCCCCTCTCCCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MSRPTELSTDEVDGLIAIGLAHDFWRGQWSTVEEAHIHRPPHRIRRISDGEMFAANIKVTRIMLEEFRSGFDLERVVQRL TEPGQLRVGRWEGTELCHRDVTDLLGPYYEEWCGAVQKKAEWISNQISEDGLREVLVKYVTFANLVAPHWWSGPDWPEMV TAFLDTVDELPPGLPPALQDRDVMHRILLSSPDSLGTEALEWLVCKGLRKTLMRSDHLDD
Sequences:
>Translated_220_residues MSRPTELSTDEVDGLIAIGLAHDFWRGQWSTVEEAHIHRPPHRIRRISDGEMFAANIKVTRIMLEEFRSGFDLERVVQRL TEPGQLRVGRWEGTELCHRDVTDLLGPYYEEWCGAVQKKAEWISNQISEDGLREVLVKYVTFANLVAPHWWSGPDWPEMV TAFLDTVDELPPGLPPALQDRDVMHRILLSSPDSLGTEALEWLVCKGLRKTLMRSDHLDD >Mature_219_residues SRPTELSTDEVDGLIAIGLAHDFWRGQWSTVEEAHIHRPPHRIRRISDGEMFAANIKVTRIMLEEFRSGFDLERVVQRLT EPGQLRVGRWEGTELCHRDVTDLLGPYYEEWCGAVQKKAEWISNQISEDGLREVLVKYVTFANLVAPHWWSGPDWPEMVT AFLDTVDELPPGLPPALQDRDVMHRILLSSPDSLGTEALEWLVCKGLRKTLMRSDHLDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25267; Mature: 25136
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS00037 MYB_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPTELSTDEVDGLIAIGLAHDFWRGQWSTVEEAHIHRPPHRIRRISDGEMFAANIKVT CCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHCCCCCCEEEHHHHHH RIMLEEFRSGFDLERVVQRLTEPGQLRVGRWEGTELCHRDVTDLLGPYYEEWCGAVQKKA HHHHHHHHCCCCHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EWISNQISEDGLREVLVKYVTFANLVAPHWWSGPDWPEMVTAFLDTVDELPPGLPPALQD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCH RDVMHRILLSSPDSLGTEALEWLVCKGLRKTLMRSDHLDD HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SRPTELSTDEVDGLIAIGLAHDFWRGQWSTVEEAHIHRPPHRIRRISDGEMFAANIKVT CCCCCCCHHHHCCHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHCCCCCCEEEHHHHHH RIMLEEFRSGFDLERVVQRLTEPGQLRVGRWEGTELCHRDVTDLLGPYYEEWCGAVQKKA HHHHHHHHCCCCHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EWISNQISEDGLREVLVKYVTFANLVAPHWWSGPDWPEMVTAFLDTVDELPPGLPPALQD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCH RDVMHRILLSSPDSLGTEALEWLVCKGLRKTLMRSDHLDD HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA