Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

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The map label for this gene is yxiO [H]

Identifier: 169628628

GI number: 169628628

Start: 1558120

End: 1559499

Strand: Direct

Name: yxiO [H]

Synonym: MAB_1538

Alternate gene names: 169628628

Gene position: 1558120-1559499 (Clockwise)

Preceding gene: 169628626

Following gene: 169628630

Centisome position: 30.75

GC content: 65.65

Gene sequence:

>1380_bases
ATGAGCATGCCTGGGGTCGAAGAGCCTAAGGGGCGTCAAGACCCAGGACCCGGTCGACAATTGGACACCCCCACCTCACG
TGGCCGGATAGCTGCGTGGGCGGCATTCGACTGGGGTTCTGCGGCCTTCAACACCGTGATCGTGATGTTCATCTTCACGC
CGTACCTGACCGGCCGGGTTGGCGCGGGGCTGCCAGATGGCGTGCCGCAGGGACTGTTGGGCTGGATGATGGGTCTCGGC
GGTGTTCTTGTCTTCCTACTTGCGCCGGTTATCGGTGTGTGGGCCGACACCCCGCAGCGGCGCCGCGTCGCGCTGGGCAC
CCTGACGACACTGGTGGTGGCGGTGGCCACCGCGATGAGCATGGTGCGTGAGGACAATCGCTACCTCTGGTTGGGCCTCG
GACTATATTGCGCGGGTTCGGTATTCAACGAGCTGGCGCAGGTGCCCTACAACGCGATGCTGCACGGGCTGACCACACCC
GCCAATGCCTCCCGGGTCTCGGGGCTGGGCCTGGCGGCCGCCTATATCGGCGGGGTCCTGGTCTTACTGCTGTGCTATCT
GGGCTTCATCTCGGGGGACGGCCCTACTCGCGGCCTCTTTCAGGTACCCGCCGCAGACGGATACGACGTGCGTGTGTCGG
CCCTGCTGGCGGCGGCATGGTTCGCGGTGTTCGCCTTGCCGTTGGTGCTCACCCGGCCAGTGCCCGACCCGGCGGCGCCG
CCGCCCAGCTCGCCCGGTGTGCTCGGGGTGTATCGGGAGCTGTGGCGCGATCTGGTCGAGCAGTGGCACATGGATCGGCG
GATCATCTATTTCCTGGTGGCGAGCGCGATCTTCCGCGACGGGATGGTCGCGATGTTCGCACTCACCCCGGTGATCGCCA
ACGGCGTGTTCCACCTTTCCGGGGCGGATATCACGCTGTTCGGGGTGGCCGGGAATGTGATGGCGGCAGTCGGAGCGGTC
GTCGGAGGATTGGTCGATACCCGGTTGGGCTCCAAGGGGATCATCGTTGGTTCACTGGCCGTGATTGTCTCGCTGGGCAT
CGTGATGATGTTTCTGACAGGGCAGCCCGCGTTCTGGATCTGTGGGCTTGCCATCGCGGCATTCGTCGGTCCGCCGCAGT
CGGCCGCACGAACACTGGTGCTGCGGATGGCGCCGGTGGGCCGGGAGGCGTTCGTCTTCGGTCTGTACACCATGACCGGT
CGGGCGGTTTCCTTTGTGGGCCCGTGGCTGTTCGCCACGTTCGCGCTGCTGTTTCACGCCACCAGGGCCGGAATCGCTGG
ACCGGTGCTGATGATCGGGCTGGGAATGGTCGCGGTGATACTCGTCAAGGTTCCCCGCTATGACCCCGTCCGTGATGAGA
TCGTCAGCGGCGCAGGCTAG

Upstream 100 bases:

>100_bases
GCTCCGGTGACGACGGCGCGGGCATCGGGACTTGGTGCGGGTATCGGCATGGAGCAATCGTAAAGGTTGCCGATTTGGCG
CCAGGCTACGCTTGTCGGTA

Downstream 100 bases:

>100_bases
CCCAGCGTGCTGCAGGTCGCCATCTTGCCGGAGGTGGCGCTCTTCTGTGCACCGTTGACGAGCAGTGTGCAGGACACGTC
GTGCGAGAAATCGGCGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MSMPGVEEPKGRQDPGPGRQLDTPTSRGRIAAWAAFDWGSAAFNTVIVMFIFTPYLTGRVGAGLPDGVPQGLLGWMMGLG
GVLVFLLAPVIGVWADTPQRRRVALGTLTTLVVAVATAMSMVREDNRYLWLGLGLYCAGSVFNELAQVPYNAMLHGLTTP
ANASRVSGLGLAAAYIGGVLVLLLCYLGFISGDGPTRGLFQVPAADGYDVRVSALLAAAWFAVFALPLVLTRPVPDPAAP
PPSSPGVLGVYRELWRDLVEQWHMDRRIIYFLVASAIFRDGMVAMFALTPVIANGVFHLSGADITLFGVAGNVMAAVGAV
VGGLVDTRLGSKGIIVGSLAVIVSLGIVMMFLTGQPAFWICGLAIAAFVGPPQSAARTLVLRMAPVGREAFVFGLYTMTG
RAVSFVGPWLFATFALLFHATRAGIAGPVLMIGLGMVAVILVKVPRYDPVRDEIVSGAG

Sequences:

>Translated_459_residues
MSMPGVEEPKGRQDPGPGRQLDTPTSRGRIAAWAAFDWGSAAFNTVIVMFIFTPYLTGRVGAGLPDGVPQGLLGWMMGLG
GVLVFLLAPVIGVWADTPQRRRVALGTLTTLVVAVATAMSMVREDNRYLWLGLGLYCAGSVFNELAQVPYNAMLHGLTTP
ANASRVSGLGLAAAYIGGVLVLLLCYLGFISGDGPTRGLFQVPAADGYDVRVSALLAAAWFAVFALPLVLTRPVPDPAAP
PPSSPGVLGVYRELWRDLVEQWHMDRRIIYFLVASAIFRDGMVAMFALTPVIANGVFHLSGADITLFGVAGNVMAAVGAV
VGGLVDTRLGSKGIIVGSLAVIVSLGIVMMFLTGQPAFWICGLAIAAFVGPPQSAARTLVLRMAPVGREAFVFGLYTMTG
RAVSFVGPWLFATFALLFHATRAGIAGPVLMIGLGMVAVILVKVPRYDPVRDEIVSGAG
>Mature_458_residues
SMPGVEEPKGRQDPGPGRQLDTPTSRGRIAAWAAFDWGSAAFNTVIVMFIFTPYLTGRVGAGLPDGVPQGLLGWMMGLGG
VLVFLLAPVIGVWADTPQRRRVALGTLTTLVVAVATAMSMVREDNRYLWLGLGLYCAGSVFNELAQVPYNAMLHGLTTPA
NASRVSGLGLAAAYIGGVLVLLLCYLGFISGDGPTRGLFQVPAADGYDVRVSALLAAAWFAVFALPLVLTRPVPDPAAPP
PSSPGVLGVYRELWRDLVEQWHMDRRIIYFLVASAIFRDGMVAMFALTPVIANGVFHLSGADITLFGVAGNVMAAVGAVV
GGLVDTRLGSKGIIVGSLAVIVSLGIVMMFLTGQPAFWICGLAIAAFVGPPQSAARTLVLRMAPVGREAFVFGLYTMTGR
AVSFVGPWLFATFALLFHATRAGIAGPVLMIGLGMVAVILVKVPRYDPVRDEIVSGAG

Specific function: Unknown

COG id: COG2270

COG function: function code R; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48275; Mature: 48143

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMPGVEEPKGRQDPGPGRQLDTPTSRGRIAAWAAFDWGSAAFNTVIVMFIFTPYLTGRV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC
GAGLPDGVPQGLLGWMMGLGGVLVFLLAPVIGVWADTPQRRRVALGTLTTLVVAVATAMS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
MVREDNRYLWLGLGLYCAGSVFNELAQVPYNAMLHGLTTPANASRVSGLGLAAAYIGGVL
HHHCCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
VLLLCYLGFISGDGPTRGLFQVPAADGYDVRVSALLAAAWFAVFALPLVLTRPVPDPAAP
HHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PPSSPGVLGVYRELWRDLVEQWHMDRRIIYFLVASAIFRDGMVAMFALTPVIANGVFHLS
CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEC
GADITLFGVAGNVMAAVGAVVGGLVDTRLGSKGIIVGSLAVIVSLGIVMMFLTGQPAFWI
CCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH
CGLAIAAFVGPPQSAARTLVLRMAPVGREAFVFGLYTMTGRAVSFVGPWLFATFALLFHA
HHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
TRAGIAGPVLMIGLGMVAVILVKVPRYDPVRDEIVSGAG
HHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCC
>Mature Secondary Structure 
SMPGVEEPKGRQDPGPGRQLDTPTSRGRIAAWAAFDWGSAAFNTVIVMFIFTPYLTGRV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC
GAGLPDGVPQGLLGWMMGLGGVLVFLLAPVIGVWADTPQRRRVALGTLTTLVVAVATAMS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
MVREDNRYLWLGLGLYCAGSVFNELAQVPYNAMLHGLTTPANASRVSGLGLAAAYIGGVL
HHHCCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
VLLLCYLGFISGDGPTRGLFQVPAADGYDVRVSALLAAAWFAVFALPLVLTRPVPDPAAP
HHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PPSSPGVLGVYRELWRDLVEQWHMDRRIIYFLVASAIFRDGMVAMFALTPVIANGVFHLS
CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEC
GADITLFGVAGNVMAAVGAVVGGLVDTRLGSKGIIVGSLAVIVSLGIVMMFLTGQPAFWI
CCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH
CGLAIAAFVGPPQSAARTLVLRMAPVGREAFVFGLYTMTGRAVSFVGPWLFATFALLFHA
HHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
TRAGIAGPVLMIGLGMVAVILVKVPRYDPVRDEIVSGAG
HHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]