| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is yxiO [H]
Identifier: 169628628
GI number: 169628628
Start: 1558120
End: 1559499
Strand: Direct
Name: yxiO [H]
Synonym: MAB_1538
Alternate gene names: 169628628
Gene position: 1558120-1559499 (Clockwise)
Preceding gene: 169628626
Following gene: 169628630
Centisome position: 30.75
GC content: 65.65
Gene sequence:
>1380_bases ATGAGCATGCCTGGGGTCGAAGAGCCTAAGGGGCGTCAAGACCCAGGACCCGGTCGACAATTGGACACCCCCACCTCACG TGGCCGGATAGCTGCGTGGGCGGCATTCGACTGGGGTTCTGCGGCCTTCAACACCGTGATCGTGATGTTCATCTTCACGC CGTACCTGACCGGCCGGGTTGGCGCGGGGCTGCCAGATGGCGTGCCGCAGGGACTGTTGGGCTGGATGATGGGTCTCGGC GGTGTTCTTGTCTTCCTACTTGCGCCGGTTATCGGTGTGTGGGCCGACACCCCGCAGCGGCGCCGCGTCGCGCTGGGCAC CCTGACGACACTGGTGGTGGCGGTGGCCACCGCGATGAGCATGGTGCGTGAGGACAATCGCTACCTCTGGTTGGGCCTCG GACTATATTGCGCGGGTTCGGTATTCAACGAGCTGGCGCAGGTGCCCTACAACGCGATGCTGCACGGGCTGACCACACCC GCCAATGCCTCCCGGGTCTCGGGGCTGGGCCTGGCGGCCGCCTATATCGGCGGGGTCCTGGTCTTACTGCTGTGCTATCT GGGCTTCATCTCGGGGGACGGCCCTACTCGCGGCCTCTTTCAGGTACCCGCCGCAGACGGATACGACGTGCGTGTGTCGG CCCTGCTGGCGGCGGCATGGTTCGCGGTGTTCGCCTTGCCGTTGGTGCTCACCCGGCCAGTGCCCGACCCGGCGGCGCCG CCGCCCAGCTCGCCCGGTGTGCTCGGGGTGTATCGGGAGCTGTGGCGCGATCTGGTCGAGCAGTGGCACATGGATCGGCG GATCATCTATTTCCTGGTGGCGAGCGCGATCTTCCGCGACGGGATGGTCGCGATGTTCGCACTCACCCCGGTGATCGCCA ACGGCGTGTTCCACCTTTCCGGGGCGGATATCACGCTGTTCGGGGTGGCCGGGAATGTGATGGCGGCAGTCGGAGCGGTC GTCGGAGGATTGGTCGATACCCGGTTGGGCTCCAAGGGGATCATCGTTGGTTCACTGGCCGTGATTGTCTCGCTGGGCAT CGTGATGATGTTTCTGACAGGGCAGCCCGCGTTCTGGATCTGTGGGCTTGCCATCGCGGCATTCGTCGGTCCGCCGCAGT CGGCCGCACGAACACTGGTGCTGCGGATGGCGCCGGTGGGCCGGGAGGCGTTCGTCTTCGGTCTGTACACCATGACCGGT CGGGCGGTTTCCTTTGTGGGCCCGTGGCTGTTCGCCACGTTCGCGCTGCTGTTTCACGCCACCAGGGCCGGAATCGCTGG ACCGGTGCTGATGATCGGGCTGGGAATGGTCGCGGTGATACTCGTCAAGGTTCCCCGCTATGACCCCGTCCGTGATGAGA TCGTCAGCGGCGCAGGCTAG
Upstream 100 bases:
>100_bases GCTCCGGTGACGACGGCGCGGGCATCGGGACTTGGTGCGGGTATCGGCATGGAGCAATCGTAAAGGTTGCCGATTTGGCG CCAGGCTACGCTTGTCGGTA
Downstream 100 bases:
>100_bases CCCAGCGTGCTGCAGGTCGCCATCTTGCCGGAGGTGGCGCTCTTCTGTGCACCGTTGACGAGCAGTGTGCAGGACACGTC GTGCGAGAAATCGGCGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 459; Mature: 458
Protein sequence:
>459_residues MSMPGVEEPKGRQDPGPGRQLDTPTSRGRIAAWAAFDWGSAAFNTVIVMFIFTPYLTGRVGAGLPDGVPQGLLGWMMGLG GVLVFLLAPVIGVWADTPQRRRVALGTLTTLVVAVATAMSMVREDNRYLWLGLGLYCAGSVFNELAQVPYNAMLHGLTTP ANASRVSGLGLAAAYIGGVLVLLLCYLGFISGDGPTRGLFQVPAADGYDVRVSALLAAAWFAVFALPLVLTRPVPDPAAP PPSSPGVLGVYRELWRDLVEQWHMDRRIIYFLVASAIFRDGMVAMFALTPVIANGVFHLSGADITLFGVAGNVMAAVGAV VGGLVDTRLGSKGIIVGSLAVIVSLGIVMMFLTGQPAFWICGLAIAAFVGPPQSAARTLVLRMAPVGREAFVFGLYTMTG RAVSFVGPWLFATFALLFHATRAGIAGPVLMIGLGMVAVILVKVPRYDPVRDEIVSGAG
Sequences:
>Translated_459_residues MSMPGVEEPKGRQDPGPGRQLDTPTSRGRIAAWAAFDWGSAAFNTVIVMFIFTPYLTGRVGAGLPDGVPQGLLGWMMGLG GVLVFLLAPVIGVWADTPQRRRVALGTLTTLVVAVATAMSMVREDNRYLWLGLGLYCAGSVFNELAQVPYNAMLHGLTTP ANASRVSGLGLAAAYIGGVLVLLLCYLGFISGDGPTRGLFQVPAADGYDVRVSALLAAAWFAVFALPLVLTRPVPDPAAP PPSSPGVLGVYRELWRDLVEQWHMDRRIIYFLVASAIFRDGMVAMFALTPVIANGVFHLSGADITLFGVAGNVMAAVGAV VGGLVDTRLGSKGIIVGSLAVIVSLGIVMMFLTGQPAFWICGLAIAAFVGPPQSAARTLVLRMAPVGREAFVFGLYTMTG RAVSFVGPWLFATFALLFHATRAGIAGPVLMIGLGMVAVILVKVPRYDPVRDEIVSGAG >Mature_458_residues SMPGVEEPKGRQDPGPGRQLDTPTSRGRIAAWAAFDWGSAAFNTVIVMFIFTPYLTGRVGAGLPDGVPQGLLGWMMGLGG VLVFLLAPVIGVWADTPQRRRVALGTLTTLVVAVATAMSMVREDNRYLWLGLGLYCAGSVFNELAQVPYNAMLHGLTTPA NASRVSGLGLAAAYIGGVLVLLLCYLGFISGDGPTRGLFQVPAADGYDVRVSALLAAAWFAVFALPLVLTRPVPDPAAPP PSSPGVLGVYRELWRDLVEQWHMDRRIIYFLVASAIFRDGMVAMFALTPVIANGVFHLSGADITLFGVAGNVMAAVGAVV GGLVDTRLGSKGIIVGSLAVIVSLGIVMMFLTGQPAFWICGLAIAAFVGPPQSAARTLVLRMAPVGREAFVFGLYTMTGR AVSFVGPWLFATFALLFHATRAGIAGPVLMIGLGMVAVILVKVPRYDPVRDEIVSGAG
Specific function: Unknown
COG id: COG2270
COG function: function code R; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48275; Mature: 48143
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMPGVEEPKGRQDPGPGRQLDTPTSRGRIAAWAAFDWGSAAFNTVIVMFIFTPYLTGRV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC GAGLPDGVPQGLLGWMMGLGGVLVFLLAPVIGVWADTPQRRRVALGTLTTLVVAVATAMS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH MVREDNRYLWLGLGLYCAGSVFNELAQVPYNAMLHGLTTPANASRVSGLGLAAAYIGGVL HHHCCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH VLLLCYLGFISGDGPTRGLFQVPAADGYDVRVSALLAAAWFAVFALPLVLTRPVPDPAAP HHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PPSSPGVLGVYRELWRDLVEQWHMDRRIIYFLVASAIFRDGMVAMFALTPVIANGVFHLS CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEC GADITLFGVAGNVMAAVGAVVGGLVDTRLGSKGIIVGSLAVIVSLGIVMMFLTGQPAFWI CCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH CGLAIAAFVGPPQSAARTLVLRMAPVGREAFVFGLYTMTGRAVSFVGPWLFATFALLFHA HHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH TRAGIAGPVLMIGLGMVAVILVKVPRYDPVRDEIVSGAG HHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCC >Mature Secondary Structure SMPGVEEPKGRQDPGPGRQLDTPTSRGRIAAWAAFDWGSAAFNTVIVMFIFTPYLTGRV CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC GAGLPDGVPQGLLGWMMGLGGVLVFLLAPVIGVWADTPQRRRVALGTLTTLVVAVATAMS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH MVREDNRYLWLGLGLYCAGSVFNELAQVPYNAMLHGLTTPANASRVSGLGLAAAYIGGVL HHHCCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH VLLLCYLGFISGDGPTRGLFQVPAADGYDVRVSALLAAAWFAVFALPLVLTRPVPDPAAP HHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PPSSPGVLGVYRELWRDLVEQWHMDRRIIYFLVASAIFRDGMVAMFALTPVIANGVFHLS CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEC GADITLFGVAGNVMAAVGAVVGGLVDTRLGSKGIIVGSLAVIVSLGIVMMFLTGQPAFWI CCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH CGLAIAAFVGPPQSAARTLVLRMAPVGREAFVFGLYTMTGRAVSFVGPWLFATFALLFHA HHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH TRAGIAGPVLMIGLGMVAVILVKVPRYDPVRDEIVSGAG HHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]