| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628620
Identifier: 169628620
GI number: 169628620
Start: 1549490
End: 1549963
Strand: Reverse
Name: 169628620
Synonym: MAB_1529c
Alternate gene names: NA
Gene position: 1549963-1549490 (Counterclockwise)
Preceding gene: 169628622
Following gene: 169628619
Centisome position: 30.59
GC content: 59.7
Gene sequence:
>474_bases ATGCCCATCTCTCCCGACCTGATCGGCACTCACCACCGATACCCCTCCACATACGTGGTCGGACGCGAGAAGATCCGTGA ACTATCCCTCGCCATCCAGAACCACCACCCCGCACATCACAGCCTTCCCGCGGCCAGCGCCCTCGGACACGACGAACTTG TGATACCGCCGACGTTCTTGTGCATCCTGGGATACGCCGCACAAAAGTGGTTTCTCCAGCACTGCGGTATCGCCATCAAC GACAAGAAGATCGCGCAGGTAGATCAGCAGTTCACGATGCTGCGCCCCATCCTCACCGGGGATGTCCTGCACTGTGAGGT CCACATGCACGACATCCGCACTGCCTTCGGCGCCGACATCGTCACCACAAAGAACGTCATCACCACCGACGACGGAACAG TGGTGCAACACGGATACACCACCCTGATGGGGCATACCGGGGACGAACCGGGCTTCACTCAGACTCACAGCTAG
Upstream 100 bases:
>100_bases CATTGCGACGGTATGACCAAGCCTCACAAGTACATCGAGTTGGCGCCCTTTCCCGACCCCTGTGCCAGACCACAAGTCAA CGCACGTTTACATTAGGCCC
Downstream 100 bases:
>100_bases CGCCTCTCGGGTAGCGCTGGAGCGTCGCTCCGGGTGGAAGTGCGCACACCGCAGATCAATCCGCGCGTTCCCAAACACGC GCTCAGCGACGAATCCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MPISPDLIGTHHRYPSTYVVGREKIRELSLAIQNHHPAHHSLPAASALGHDELVIPPTFLCILGYAAQKWFLQHCGIAIN DKKIAQVDQQFTMLRPILTGDVLHCEVHMHDIRTAFGADIVTTKNVITTDDGTVVQHGYTTLMGHTGDEPGFTQTHS
Sequences:
>Translated_157_residues MPISPDLIGTHHRYPSTYVVGREKIRELSLAIQNHHPAHHSLPAASALGHDELVIPPTFLCILGYAAQKWFLQHCGIAIN DKKIAQVDQQFTMLRPILTGDVLHCEVHMHDIRTAFGADIVTTKNVITTDDGTVVQHGYTTLMGHTGDEPGFTQTHS >Mature_156_residues PISPDLIGTHHRYPSTYVVGREKIRELSLAIQNHHPAHHSLPAASALGHDELVIPPTFLCILGYAAQKWFLQHCGIAIND KKIAQVDQQFTMLRPILTGDVLHCEVHMHDIRTAFGADIVTTKNVITTDDGTVVQHGYTTLMGHTGDEPGFTQTHS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0336 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016709 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17347; Mature: 17216
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPISPDLIGTHHRYPSTYVVGREKIRELSLAIQNHHPAHHSLPAASALGHDELVIPPTFL CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEECHHHH CILGYAAQKWFLQHCGIAINDKKIAQVDQQFTMLRPILTGDVLHCEVHMHDIRTAFGADI HHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHCCCE VTTKNVITTDDGTVVQHGYTTLMGHTGDEPGFTQTHS EECCCEEECCCCEEEECCCEEEECCCCCCCCCCCCCC >Mature Secondary Structure PISPDLIGTHHRYPSTYVVGREKIRELSLAIQNHHPAHHSLPAASALGHDELVIPPTFL CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEECHHHH CILGYAAQKWFLQHCGIAINDKKIAQVDQQFTMLRPILTGDVLHCEVHMHDIRTAFGADI HHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHCCCE VTTKNVITTDDGTVVQHGYTTLMGHTGDEPGFTQTHS EECCCEEECCCCEEEECCCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA