| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is bcp [H]
Identifier: 169628606
GI number: 169628606
Start: 1535895
End: 1536368
Strand: Reverse
Name: bcp [H]
Synonym: MAB_1515c
Alternate gene names: 169628606
Gene position: 1536368-1535895 (Counterclockwise)
Preceding gene: 169628608
Following gene: 169628599
Centisome position: 30.32
GC content: 63.08
Gene sequence:
>474_bases ATGGCGGAAACCAAGCGGCTCGAAGTTGGCGACAAGGCCCCCACGTTCACTCTGCTCGACGCGGACGGCAAGAAGGTGTC GCTGTCCTCGTACAAGGGCCGCAAGGTGATCATCTACTTCTACCCCGCCGCCATGACCCCCGGCTGCACCAAACAGGCGT GCGATTTCCGCGACAGCCTGGCCGAACTCAACGAGGCCGGCCTTGACGTCATCGGCATCTCGCCCGACAAGCCGGAAAAG CTGGCCAAGTTCCGCGACCGCGACGGCGTGAACTTCCCGCTGCTCTCCGACCCGGACAAGACGACGCTGACCGCCTATGG CGCCTTCGGCGAGAAGAAGCTGTACGGAAAGATCGTCGAGGGCGTCATCCGATCGACGTTCGTCGTGGATGAAAAGGGCA ACATCGAGGTGGCGCAGTACAACGTGAAGGCCACCGGCCACGTCGCCAAGCTGCGCCGCGACATCTCCGTCTGA
Upstream 100 bases:
>100_bases CTGGATCCCTGGCCACGTGCACTCCTCCACGTCCGCGGTATGAAACTCAAGCAACTACCCTAGGGCAACAACTGTACGGG TCAACAGAAAGGCACCGGTC
Downstream 100 bases:
>100_bases GGCTTGAGACGGCTGTCGAGTGCGAGCGTGGCGCGGAAAACAAGTCGAGATTGCGCGTCAGACTCGCGCTCGACGCTCAA GATCAACACAACGCGCTAGC
Product: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MAETKRLEVGDKAPTFTLLDADGKKVSLSSYKGRKVIIYFYPAAMTPGCTKQACDFRDSLAELNEAGLDVIGISPDKPEK LAKFRDRDGVNFPLLSDPDKTTLTAYGAFGEKKLYGKIVEGVIRSTFVVDEKGNIEVAQYNVKATGHVAKLRRDISV
Sequences:
>Translated_157_residues MAETKRLEVGDKAPTFTLLDADGKKVSLSSYKGRKVIIYFYPAAMTPGCTKQACDFRDSLAELNEAGLDVIGISPDKPEK LAKFRDRDGVNFPLLSDPDKTTLTAYGAFGEKKLYGKIVEGVIRSTFVVDEKGNIEVAQYNVKATGHVAKLRRDISV >Mature_156_residues AETKRLEVGDKAPTFTLLDADGKKVSLSSYKGRKVIIYFYPAAMTPGCTKQACDFRDSLAELNEAGLDVIGISPDKPEKL AKFRDRDGVNFPLLSDPDKTTLTAYGAFGEKKLYGKIVEGVIRSTFVVDEKGNIEVAQYNVKATGHVAKLRRDISV
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=141, Percent_Identity=48.2269503546099, Blast_Score=153, Evalue=6e-39, Organism=Saccharomyces cerevisiae, GI6322180, Length=129, Percent_Identity=37.2093023255814, Blast_Score=82, Evalue=3e-17,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 17222; Mature: 17091
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETKRLEVGDKAPTFTLLDADGKKVSLSSYKGRKVIIYFYPAAMTPGCTKQACDFRDSL CCCCCEEECCCCCCEEEEEECCCCEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH AELNEAGLDVIGISPDKPEKLAKFRDRDGVNFPLLSDPDKTTLTAYGAFGEKKLYGKIVE HHHHHCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHH GVIRSTFVVDEKGNIEVAQYNVKATGHVAKLRRDISV HHHHHEEEECCCCCEEEEEEEEECCCHHHHHHHHCCC >Mature Secondary Structure AETKRLEVGDKAPTFTLLDADGKKVSLSSYKGRKVIIYFYPAAMTPGCTKQACDFRDSL CCCCEEECCCCCCEEEEEECCCCEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH AELNEAGLDVIGISPDKPEKLAKFRDRDGVNFPLLSDPDKTTLTAYGAFGEKKLYGKIVE HHHHHCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHH GVIRSTFVVDEKGNIEVAQYNVKATGHVAKLRRDISV HHHHHEEEECCCCCEEEEEEEEECCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]